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Visualize smooth ChIP peaks with Homer makeUCSCfile
homer ucsc ChIP-Seq
updated 17 months ago by • 0 • written 7.3 years ago by ▴ 90
5
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14
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3.2k
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Bowtie2 hg19 reference for gatk MuTect
gatk bowtie2
updated 3.1 years ago by ▴ 70 • written 5.3 years ago by ▴ 90
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0
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7.0k
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Comment: C: How To Calculate Conservation Score Of Given Bed Regions
updated 5.0 years ago by 44k • written 7.5 years ago by ▴ 90
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0
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3.2k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
5.3 years ago by varsha619 ▴ 90
0
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1
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3.2k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
5.3 years ago by varsha619 ▴ 90
0
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3.2k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
5.3 years ago by varsha619 ▴ 90
0
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0
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3.2k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
5.3 years ago by varsha619 ▴ 90
0
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0
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3.2k
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Comment: C: Bowtie2 hg19 reference for gatk MuTect
5.3 years ago by varsha619 ▴ 90
0
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1
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2.8k
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Comment: C: UCSC itemRgb on column 9
6.0 years ago by varsha619 ▴ 90
0
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1
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2.8k
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Comment: C: UCSC itemRgb on column 9
6.0 years ago by varsha619 ▴ 90
0
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1
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2.8k
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Comment: C: UCSC itemRgb on column 9
6.0 years ago by varsha619 ▴ 90
0
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8
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2.8k
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UCSC itemRgb on column 9
ucsc itemRgb
6.0 years ago by varsha619 ▴ 90
0
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0
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7.8k
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Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
0
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0
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7.8k
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Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
0
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1
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7.8k
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Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
0
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0
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7.8k
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Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
0
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1
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7.8k
views
Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
0
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1
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7.8k
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Comment: C: STAR for chip-seq
6.4 years ago by varsha619 ▴ 90
8
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13
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7.8k
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STAR for chip-seq
star ChIP-Seq alignment
updated 6.4 years ago by ★ 2.0k • written 6.4 years ago by ▴ 90
0
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1
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2.3k
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Comment: C: fasta to bed format with more information that just chr locations
6.4 years ago by varsha619 ▴ 90
0
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1
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2.3k
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Comment: C: fasta to bed format with more information that just chr locations
6.4 years ago by varsha619 ▴ 90
13
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10
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2.3k
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fasta to bed format with more information that just chr locations
fasta to bed
updated 6.4 years ago by ★ 4.0k • written 6.4 years ago by ▴ 90
0
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0
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2.4k
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Comment: C: using MACS2 with hg38
6.6 years ago by varsha619 ▴ 90
0
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2
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2.4k
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using MACS2 with hg38
macs2 hg38
updated 6.6 years ago by 13k • written 6.6 years ago by ▴ 90
0
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1
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2.6k
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Comment: C: bp overlap between multiple beds
6.7 years ago by varsha619 ▴ 90
0
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1
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2.6k
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Comment: C: bp overlap between multiple beds
6.7 years ago by varsha619 ▴ 90
0
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1
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2.6k
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Comment: C: bp overlap between multiple beds
6.7 years ago by varsha619 ▴ 90
1
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7
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2.6k
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bp overlap between multiple beds
bedtools multiinter venn
updated 6.7 years ago by 35k • written 6.7 years ago by ▴ 90
0
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0
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4.5k
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Comment: C: Finding An Genomic Intervals Shared For A Given Individual As Called By Two Or M
6.7 years ago by varsha619 ▴ 90
0
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0
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
0
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0
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
0
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1
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
0
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1
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
1
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1
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
7
votes
14
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5.6k
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wig files to bigwig using UCSC kent
wigtobigwig
updated 6.7 years ago by ▴ 580 • written 6.7 years ago by ▴ 90
0
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1
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
0
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1
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5.6k
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Comment: C: wig files to bigwig using UCSC kent
6.7 years ago by varsha619 ▴ 90
0
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0
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3.5k
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Comment: C: bedops gff2bed error
6.8 years ago by varsha619 ▴ 90
2
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2
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3.5k
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bedops gff2bed error
bedops gff2bed
updated 6.8 years ago by 35k • written 6.8 years ago by ▴ 90
3
votes
2
replies
2.9k
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Does MACS score correlate with binding strength
macs ChIP-Seq
updated 6.8 years ago by 20 • written 6.9 years ago by ▴ 90
0
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1
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4.0k
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Comment: C: meme-chip command line usage error
6.9 years ago by varsha619 ▴ 90
3
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10
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4.0k
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meme-chip command line usage error
meme-chip
6.9 years ago by varsha619 ▴ 90
0
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1
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4.0k
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Answer: A: meme-chip command line usage error
6.9 years ago by varsha619 ▴ 90
0
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0
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4.0k
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Comment: C: meme-chip command line usage error
6.9 years ago by varsha619 ▴ 90
0
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0
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4.0k
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Comment: C: meme-chip command line usage error
6.9 years ago by varsha619 ▴ 90
0
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1
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8.9k
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Comment: C: How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
6.9 years ago by varsha619 ▴ 90
0
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0
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2.9k
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Comment: C: Does MACS score correlate with binding strength
6.9 years ago by varsha619 ▴ 90
0
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0
replies
4.6k
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Comment: C: bedGraphToBigWig error - end coordinate bigger than chr
7.2 years ago by varsha619 ▴ 90
1
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4
replies
4.6k
views
bedGraphToBigWig error - end coordinate bigger than chr
bedGraphToBigWig macs2
updated 7.3 years ago by 35k • written 7.3 years ago by ▴ 90
0
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0
replies
3.2k
views
Comment: C: phastcon conservation score for chip seq peaks
7.5 years ago by varsha619 ▴ 90
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