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Comment: Comment: get SNPs from draft genomes
9 weeks ago by Changchuan Yin ▴ 170
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428
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Answer: Answer: get SNPs from draft genomes
9 weeks ago by Changchuan Yin ▴ 170
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2.2k
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Comment: C: paired-end reads in BBMap randomreads.sh
4.2 years ago by Changchuan Yin ▴ 170
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1
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1.2k
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Answer: A: Identifying shared exact sequence variants between two datasets
4.2 years ago by Changchuan Yin ▴ 170
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3.2k
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Comment: C: SNP analysis between two bacterial genomes
4.3 years ago by Changchuan Yin ▴ 170
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1
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3.0k
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Answer: A: How can I contribute to the Bioinformatics community as a Software Engineer
4.4 years ago by Changchuan Yin ▴ 170
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819
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Comment: C: how to determine bacteria relatedness from two variant calls
4.6 years ago by Changchuan Yin ▴ 170
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2
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819
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how to determine bacteria relatedness from two variant calls
next-gen genome SNP
updated 4.6 years ago by 5.9k • written 4.6 years ago by ▴ 170
2
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2
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2.1k
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can variants be called between two genomes?
SNP alignment next-gen sequence
4.8 years ago by Changchuan Yin ▴ 170
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2.1k
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Answer: A: can variants be called between two genomes?
4.8 years ago by Changchuan Yin ▴ 170
3
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3
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4.1k
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Working example for VCF visualization in Circos
SNP next-gen
updated 5.1 years ago by • 0 • written 5.6 years ago by ▴ 170
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0
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3.2k
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Comment: A: Number of SNPs in VCF
5.3 years ago by Changchuan Yin ▴ 170
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1
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3.5k
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Comment: C: SNP density plot
5.4 years ago by Changchuan Yin ▴ 170
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1
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2.5k
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Phylogenetic tree visualization by Python
sequence genome
5.4 years ago by Changchuan Yin ▴ 170
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0
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2.5k
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Answer: A: Phylogenetic tree visualization by Python
5.4 years ago by Changchuan Yin ▴ 170
1
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3
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1.3k
views
How to validate zero SNPs in variant calling?
SNP alignment
updated 5.5 years ago by 20 • written 5.6 years ago by ▴ 170
3
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1
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2.6k
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Answer: A: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
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2.6k
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Comment: C: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
0
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1
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2.6k
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Comment: C: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
1
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1
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2.6k
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Comment: C: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
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2
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2.6k
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Comment: C: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
0
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1
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2.6k
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Comment: A: Bioinformatics independent research group
5.6 years ago by Changchuan Yin ▴ 170
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1
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1.3k
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Comment: C: How to validate zero SNPs in variant calling?
5.6 years ago by Changchuan Yin ▴ 170
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0
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1.6k
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Comment: C: How to know which reads were not aligned to a reference genome?
5.6 years ago by Changchuan Yin ▴ 170
1
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2
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1.6k
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How to know which reads were not aligned to a reference genome?
sequence SNP alignmet
updated 5.6 years ago by ▴ 60 • written 5.6 years ago by ▴ 170
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0
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1.9k
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Comment: C: Is it possible to get VCF from two fastq files without reference genome?
5.6 years ago by Changchuan Yin ▴ 170
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1
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1.9k
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Comment: C: Is it possible to get VCF from two fastq files without reference genome?
5.6 years ago by Changchuan Yin ▴ 170
0
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1
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1.9k
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Comment: C: Is it possible to get VCF from two fastq files without reference genome?
5.6 years ago by Changchuan Yin ▴ 170
0
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0
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1.9k
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Comment: C: Is it possible to get VCF from two fastq files without reference genome?
5.6 years ago by Changchuan Yin ▴ 170
2
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8
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1.9k
views
Is it possible to get VCF from two fastq files without reference genome?
next-gen snp
updated 5.6 years ago by 7.4k • written 5.6 years ago by ▴ 170
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1
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8.4k
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Comment: A: Truncated sam file - Parse error
5.6 years ago by Changchuan Yin ▴ 170
1
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1
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4.1k
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Answer: C: Working example for VCF visualization in Circos
5.6 years ago by Changchuan Yin ▴ 170
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0
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7.1k
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Comment: C: How to display mismatched sequences from alignment when using Biopython
5.7 years ago by Changchuan Yin ▴ 170
7
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17
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7.1k
views
6 follow
How to display mismatched sequences from alignment when using Biopython
alignment biopython
updated 5.7 years ago by ★ 2.7k • written 5.7 years ago by ▴ 170
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2
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7.1k
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Comment: C: How to display mismatched sequences from alignment when using Biopython
5.7 years ago by Changchuan Yin ▴ 170
1
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3
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7.1k
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Comment: C: How to display mismatched sequences from alignment when using Biopython
5.7 years ago by Changchuan Yin ▴ 170
0
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0
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7.1k
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Comment: C: How to display mismatched sequences from alignment when using Biopython
5.7 years ago by Changchuan Yin ▴ 170
0
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2
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7.1k
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Comment: C: How to display mismatched sequences from alignment when using Biopython
5.7 years ago by Changchuan Yin ▴ 170
2
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0
replies
1.2k
views
Answer: A: Phylogeny Analysis Data
5.8 years ago by Changchuan Yin ▴ 170
0
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1
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1.2k
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Answer: A: human gut microbiota with disease and drug resistance
6.0 years ago by Changchuan Yin ▴ 170
1
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1
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1.5k
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Answer: A: Method of Checking for Mutation Patterns
6.0 years ago by Changchuan Yin ▴ 170
0
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1
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2.2k
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Comment: A: How to get list of GenBank accession Ids by a Taxonomy Id?
6.0 years ago by Changchuan Yin ▴ 170
0
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3
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2.2k
views
How to get list of GenBank accession Ids by a Taxonomy Id?
sequence Genbank
6.0 years ago by Changchuan Yin ▴ 170
0
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0
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4.1k
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Answer: A: Copy Number Variation Tools
6.0 years ago by Changchuan Yin ▴ 170
1
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0
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1.2k
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Answer: A: Comparative analysis, genomic analysis of infectious bacteria
6.0 years ago by Changchuan Yin ▴ 170
1
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0
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1.7k
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Comment: C: Recommendations about phylogenetic analysis tools for RFLP/AFLP/RAPD data
6.0 years ago by Changchuan Yin ▴ 170
0
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0
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1.4k
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Answer: A: How can i do this by matlab ??
updated 6.0 years ago by 127k • written 6.0 years ago by ▴ 170
0
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1
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1.4k
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Answer: A: How can i do this by matlab ??
updated 6.0 years ago by 127k • written 6.0 years ago by ▴ 170
0
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1
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1.7k
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Answer: A: Recommendations about phylogenetic analysis tools for RFLP/AFLP/RAPD data
6.0 years ago by Changchuan Yin ▴ 170
0
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0
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1.8k
views
Answer: A: Sequence similarity scores between two sets of genes from different genomes
6.0 years ago by Changchuan Yin ▴ 170
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