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Comment:
C: What command generate blast database from file in all.fna folder?
5.1 years ago by
Bioinfonext
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0
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1
reply
2.7k
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Comment:
C: How to extract genome files based on genome ID
5.1 years ago by
Bioinfonext
▴ 470
1
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0
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2.7k
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Comment:
C: How to extract genome files based on genome ID
5.1 years ago by
Bioinfonext
▴ 470
6
votes
11
replies
2.7k
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How to extract genome files based on genome ID
linux
R
BASH
updated 5.1 years ago by
bas1993
▴ 60 • written 5.1 years ago by
Bioinfonext
▴ 470
0
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0
replies
1.6k
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Comment:
C: how to filter microbial genome based on quality score
5.1 years ago by
Bioinfonext
▴ 470
0
votes
1
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8.4k
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Comment:
C: how to run Jupyter script on Slurm HPC
5.1 years ago by
Bioinfonext
▴ 470
0
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1
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8.4k
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Comment:
C: how to run Jupyter script on Slurm HPC
5.1 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
650
views
How to filter microbial genome based on genome ID
bash
linux
microbial
genome
5.1 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
2.2k
views
Genome guided assembly using cufflinks
Assembly
updated 5.2 years ago by
Biostar
20 • written 8.6 years ago by
Bioinfonext
▴ 470
0
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0
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1.6k
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Comment:
C: how to filter microbial genome based on quality score
5.2 years ago by
Bioinfonext
▴ 470
0
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1.6k
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Comment:
C: how to filter microbial genome based on quality score
5.2 years ago by
Bioinfonext
▴ 470
0
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1
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1.6k
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Comment:
C: how to filter microbial genome based on quality score
5.3 years ago by
Bioinfonext
▴ 470
1
vote
6
replies
1.6k
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how to filter microbial genome based on quality score
metagenomics
repophlan
5.3 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
960
views
Comment:
C: how to write all pair end file name in a tab delimited format
5.4 years ago by
Bioinfonext
▴ 470
2
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3
replies
960
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how to write all pair end file name in a tab delimited format
linux
unix
bash
updated 5.4 years ago by
ATpoint
89k • written 5.4 years ago by
Bioinfonext
▴ 470
0
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0
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4.4k
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Comment:
C: PCoA plot with phyla abundance
5.4 years ago by
Bioinfonext
▴ 470
1
vote
0
replies
1.9k
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Comment:
C: extract count data for a gene ID list in R
5.4 years ago by
Bioinfonext
▴ 470
0
votes
1
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1.9k
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Comment:
C: extract count data for a gene ID list in R
5.4 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
2.6k
views
Relative abundance in phyloseq and biplot
vegan
phyloseq
R bioconducter
5.4 years ago by
Bioinfonext
▴ 470
1
vote
1
reply
1.9k
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Answer:
C: extract count data for a gene ID list in R
5.4 years ago by
Bioinfonext
▴ 470
2
votes
6
replies
1.9k
views
extract count data for a gene ID list in R
R
5.4 years ago by
Bioinfonext
▴ 470
0
votes
1
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4.4k
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Comment:
C: PCA plot with phyla abundance
5.5 years ago by
Bioinfonext
▴ 470
1
vote
7
replies
4.4k
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PCoA plot with phyla abundance
R
vegan
phyloseq
5.5 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
4.4k
views
Comment:
C: PCA plot with phyla abundance
5.5 years ago by
Bioinfonext
▴ 470
0
votes
2
replies
1.4k
views
Vegan beta diversity and permutation analysis
vegan
bioconductor
R
updated 4.1 years ago by
Ram
45k • written 6.2 years ago by
Bioinfonext
▴ 470
1
vote
0
replies
1.5k
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Comment:
C: adding gene name correspond to gene id from Ensembl (Oryza sativa / rice)
5.6 years ago by
Bioinfonext
▴ 470
3
votes
4
replies
1.5k
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adding gene name correspond to gene id from Ensembl (Oryza sativa / rice)
RNA-Seq
R
updated 5.6 years ago by
Kevin Blighe
89k • written 5.6 years ago by
Bioinfonext
▴ 470
0
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0
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1.5k
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Comment:
C: adding gene name correspond to gene id from Ensembl
5.6 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
1.7k
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Comment:
C: cat command to get multiple fq reads into single fastq file
5.7 years ago by
Bioinfonext
▴ 470
2
votes
3
replies
1.7k
views
cat command to get multiple fq reads into single fastq file
rna-seq
linux
5.7 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
1.6k
views
Comment:
C: extract unmapped pair end read from sam files
5.8 years ago by
Bioinfonext
▴ 470
1
vote
3
replies
1.6k
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extract unmapped pair end read from sam files
RNA-Seq
linux
samtools
bbtools
updated 5.8 years ago by
GenoMax
153k • written 5.8 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
936
views
RNAseq read mapping statistics from sam file
RNA-Seq
Hisat2
bash
5.8 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
6.8k
views
Comment:
C: How to generate a combined read count txt file with header as file name
6.0 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
6.8k
views
Comment:
C: How to generate a combined read count txt file with header as file name
6.0 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
6.8k
views
Comment:
C: How to generate a combined read count txt file with header as file name
6.0 years ago by
Bioinfonext
▴ 470
1
vote
0
replies
1.8k
views
Comment:
C: HOW TO remove all spaces except first space with semicolon
6.0 years ago by
Bioinfonext
▴ 470
0
votes
2
replies
1.8k
views
Comment:
C: HOW TO remove all spaces except first space with semicolon
6.1 years ago by
Bioinfonext
▴ 470
0
votes
2
replies
1.8k
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Comment:
C: HOW TO remove all spaces except first space with semicolon
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
1.8k
views
Comment:
C: HOW TO remove all spaces except first space with semicolon
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
1.8k
views
Comment:
C: HOW TO remove all spaces except first space with semicolon
6.1 years ago by
Bioinfonext
▴ 470
3
votes
12
replies
1.8k
views
HOW TO remove all spaces except first space with semicolon
bash
linux
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
32k
views
Comment:
C: Trimmomatic job script to run on multiple pair end read file
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
32k
views
Comment:
C: Trimmomatic job script to run on multiple pair end read file
6.1 years ago by
Bioinfonext
▴ 470
0
votes
0
replies
2.7k
views
Comment:
C: Error with HTseq RNAseq read count
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
2.7k
views
Comment:
C: Error with HTseq RNAseq read count
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
2.7k
views
Comment:
C: Error with HTseq RNAseq read count
6.1 years ago by
Bioinfonext
▴ 470
4
votes
5
replies
2.7k
views
Error with HTseq RNAseq read count
RNA-Seq
HTseq
updated 6.1 years ago by
shawn.w.foley
★ 1.3k • written 6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
32k
views
Comment:
C: Trimmomatic job script to run on multiple pair end read file
6.1 years ago by
Bioinfonext
▴ 470
0
votes
1
reply
32k
views
Comment:
C: Trimmomatic job script to run on multiple pair end read file
6.1 years ago by
Bioinfonext
▴ 470
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