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how to run limma for large datasets
R HPC biostatistics statistics
updated 5 months ago by ★ 7.9k • written 13 months ago by ▴ 470
0
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7
replies
2.6k
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space converted into dots in header name
R Rstudio microbiome
updated 4.1 years ago by 21k • written 4.1 years ago by ▴ 470
1
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0
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302
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how to perform QTL analysis and how to integrate multi-omit datasets
R statistics genetics
8 months ago by Bioinfonext ▴ 470
0
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0
replies
822
views
Comment: Comment: how to run limma for large datasets
13 months ago by Bioinfonext ▴ 470
1
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1
reply
622
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robust linear regression with interaction term
R epigenetic biostatistics statistics
updated 13 months ago by ▴ 930 • written 13 months ago by ▴ 470
0
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0
replies
930
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Comment: Comment: how to do Manhatton plot for significant DNA methylation sites associations
14 months ago by Bioinfonext ▴ 470
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2
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930
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how to do Manhatton plot for significant DNA methylation sites associations
R array EPIC statistics Epigenetics
14 months ago by Bioinfonext ▴ 470
1
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3
replies
2.1k
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GOSeq gene ontology enrichment analysis in rice
goseq R
updated 15 months ago by 21k • written 4.9 years ago by ▴ 470
1
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1
reply
542
views
how arrange samples columns according to row names from another file in R
statistics r biostatistics
updated 15 months ago by 13k • written 15 months ago by ▴ 470
3
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2
replies
724
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how to merge two files without duplicating same column
R statistics biostatistics
updated 15 months ago by ▴ 480 • written 15 months ago by ▴ 470
1
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1
reply
883
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Comment: Comment: how to remove multiple columns from a file in R
16 months ago by Bioinfonext ▴ 470
3
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4
replies
883
views
how to remove multiple columns from a file in R
r
16 months ago by Bioinfonext ▴ 470
0
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2
replies
804
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Comment: Comment: select unique samples in R
16 months ago by Bioinfonext ▴ 470
1
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4
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804
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select unique samples in R
statistics r biostatistics
16 months ago by Bioinfonext ▴ 470
0
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0
replies
627
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Comment: Comment: filtering samples
17 months ago by Bioinfonext ▴ 470
0
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2
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627
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filtering samples
R statistics
updated 17 months ago by 150k • written 17 months ago by ▴ 470
2
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6
replies
1.1k
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how to merge multiple files based on column header
R statistics biostatistics
updated 17 months ago by 6.2k • written 17 months ago by ▴ 470
0
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1
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1.1k
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Comment: Comment: how to merge multiple files based on column header
17 months ago by Bioinfonext ▴ 470
0
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0
replies
791
views
Comment: Comment: R packages for DNA methylation as mediator analysis
18 months ago by Bioinfonext ▴ 470
0
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2
replies
791
views
R packages for DNA methylation as mediator analysis
statistics R EPIgenetics array EPIC
18 months ago by Bioinfonext ▴ 470
0
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0
replies
434
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DMRcate design
R Epigenetics EPIC DMRcate
updated 18 months ago by 45k • written 18 months ago by ▴ 470
0
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8
replies
6.4k
views
Error: protect(): protection stack overflow
R random-forest
updated 8 months ago by • 0 • written 4.5 years ago by ▴ 470
1
vote
1
reply
585
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linking methylation/SNPs to gene expression
statistics GWAS R epigenetics
updated 2.2 years ago by ★ 3.0k • written 2.2 years ago by ▴ 470
2
votes
2
replies
7.4k
views
How to understand Hisat2 aligment result
RNA-Seq
updated 2.6 years ago by ▴ 40 • written 8.2 years ago by ▴ 470
0
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0
replies
2.6k
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Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
votes
0
replies
422
views
Imputation during SNPs calling
Genomics statistics Bioconducter
2.9 years ago by Bioinfonext ▴ 470
0
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1
reply
2.6k
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Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
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1
reply
2.6k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
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0
replies
2.6k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
votes
0
replies
2.6k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.6k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
0
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1
reply
2.6k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.9 years ago by Bioinfonext ▴ 470
4
votes
14
replies
2.6k
views
arrange samples in same order in rows and column in R
R statistics
2.9 years ago by Bioinfonext ▴ 470
0
votes
0
replies
455
views
filtering.context.removal in RnBeads
RnBeads Epigenetics R
3.1 years ago by Bioinfonext ▴ 470
3
votes
8
replies
7.8k
views
how to run Jupyter script on Slurm HPC
HPC jupyter
updated 3.2 years ago by ▴ 10 • written 4.7 years ago by ▴ 470
0
votes
1
reply
967
views
how to plot correlation data in R
Network cytoscape R
updated 3.5 years ago by 89k • written 3.5 years ago by ▴ 470
4
votes
1
reply
4.0k
views
how to pheatmap color bar based on column category
Bioconducter R pheatmap
3.5 years ago by Bioinfonext ▴ 470
0
votes
1
reply
1.8k
views
Network plot using NetCoMi and igraph
igraph R plot Network amplicon
updated 3.6 years ago by 3.9k • written 3.6 years ago by ▴ 470
0
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0
replies
1.3k
views
Comment: Comment: network analysis for microbial amplicon sequencing data
3.6 years ago by Bioinfonext ▴ 470
2
votes
2
replies
1.3k
views
network analysis for microbial amplicon sequencing data
plot Network igraph R
3.6 years ago by Bioinfonext ▴ 470
0
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1
reply
4.3k
views
Comment: Comment: BUSCO installation and run
3.7 years ago by Bioinfonext ▴ 470
3
votes
5
replies
4.3k
views
BUSCO installation and run
RNAseq
updated 3.7 years ago by 8.8k • written 3.7 years ago by ▴ 470
1
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0
replies
4.3k
views
Comment: Comment: BUSCO installation and run
3.7 years ago by Bioinfonext ▴ 470
6
votes
18
replies
6.2k
views
6 follow
How to generate a combined read count txt file with header as file name
bash linux awk R
updated 3.6 years ago by ▴ 10 • written 5.6 years ago by ▴ 470
0
votes
1
reply
2.9k
views
how to color positive and negative correlation in Cytoscape
Cytoscape
updated 3.9 years ago by • 0 • written 3.9 years ago by ▴ 470
1
vote
2
replies
1.1k
views
Cytoscape for co-occurence network analysis
Microbiome 16S analysis Cytoscape Network
3.9 years ago by Bioinfonext ▴ 470
0
votes
0
replies
2.3k
views
Comment: Comment: pheatmap input file
3.9 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.3k
views
Comment: Comment: pheatmap input file
3.9 years ago by Bioinfonext ▴ 470
0
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1
reply
2.3k
views
Comment: Comment: pheatmap input file
3.9 years ago by Bioinfonext ▴ 470
1
vote
6
replies
2.3k
views
pheatmap input file
r Qiime2 pheatmap
3.9 years ago by Bioinfonext ▴ 470
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