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Comment: Comment: From TPM to raw counts
21 months ago by Gama313 ▴ 130
0
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0
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3.7k
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Comment: Comment: From TPM to raw counts
23 months ago by Gama313 ▴ 130
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1
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3.7k
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Comment: Comment: From TPM to raw counts
updated 23 months ago by 103k • written 23 months ago by ▴ 130
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0
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3.7k
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Comment: Comment: From TPM to raw counts
23 months ago by Gama313 ▴ 130
5
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7
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3.7k
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From TPM to raw counts
tpm Deconvolution rnaseq
21 months ago by Gama313 ▴ 130
1
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0
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2.4k
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Answer: Answer: Cibersort phenotpe file to create signature matrix
2.5 years ago by Gama313 ▴ 130
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0
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1.7k
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Comment: Comment: RNASeq differential expression masked by pathways disregulation
2.8 years ago by Gama313 ▴ 130
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1
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1.7k
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Comment: Comment: RNASeq differential expression masked by pathways disregulation
2.8 years ago by Gama313 ▴ 130
0
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5
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1.7k
views
RNASeq differential expression masked by pathways disregulation
normalization batch RNA-seq
updated 16 months ago by 45k • written 2.8 years ago by ▴ 130
18
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2
replies
4.1k
views
Hugely different results between edgeR and DESeq2
edgeR RNASeq Expression Differential DESeq2
updated 2.8 years ago by ★ 8.6k • written 2.8 years ago by ▴ 130
0
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0
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1.5k
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Comment: Comment: Evaluating RNASeq counts distribution
3.0 years ago by Gama313 ▴ 130
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1
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1.5k
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Comment: Comment: Evaluating RNASeq counts distribution
3.0 years ago by Gama313 ▴ 130
3
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6
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1.5k
views
Evaluating RNASeq counts distribution
negative differential RNASeq expression binomial
3.0 years ago by Gama313 ▴ 130
0
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0
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1.5k
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Comment: Comment: Evaluating RNASeq counts distribution
3.0 years ago by Gama313 ▴ 130
0
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1
reply
2.0k
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Comment: Comment: Mutation filtering based on Lanes
3.1 years ago by Gama313 ▴ 130
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0
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2.0k
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Comment: Comment: Mutation filtering based on Lanes
3.1 years ago by Gama313 ▴ 130
0
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1
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2.0k
views
Comment: Comment: Mutation filtering based on Lanes
3.1 years ago by Gama313 ▴ 130
0
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0
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2.0k
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Comment: Comment: Mutation filtering based on Lanes
3.1 years ago by Gama313 ▴ 130
3
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9
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2.0k
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Mutation filtering based on Lanes
ngs calling Variant lanes
updated 3.1 years ago by 5.2k • written 3.1 years ago by ▴ 130
3
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0
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753
views
RNASeq counts normalization for RNA degradation
gtf TIN RIN integrity RNASeq
3.3 years ago by Gama313 ▴ 130
0
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1
reply
1.2k
views
Comment: Comment: PCR duplicates in FFPE RNASeq
3.4 years ago by Gama313 ▴ 130
0
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3
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1.2k
views
PCR duplicates in FFPE RNASeq
PCR-duplicates RNA-Seq FFPE Variant-Calling
updated 20 months ago by 45k • written 3.4 years ago by ▴ 130
0
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0
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2.3k
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Answer: Answer: Calling variants on reads with MAPQ=0 on HaplotypeCaller or bcftools mpileup
3.5 years ago by Gama313 ▴ 130
0
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0
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650
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Coverage drops in fastq alignment against custom Immunoglobulin reference
Alignment RNASeq Immunoglobulin
4.2 years ago by Gama313 ▴ 130
0
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0
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879
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Calculation of the genotype likelyhood from raw data
samtools genotype-likelihood bam
updated 2.4 years ago by 45k • written 5.1 years ago by ▴ 130
0
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0
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842
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Calculation of the genotype likelyhood
samtools gatk genotype likelihood
5.1 years ago by Gama313 ▴ 130
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0
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1.7k
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Comment: C: pysam doesn't calculate correct nucleotide quantities from .bam file
5.2 years ago by Gama313 ▴ 130
1
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2
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1.7k
views
pysam doesn't calculate correct nucleotide quantities from .bam file
pysam count python
updated 5.2 years ago by 15k • written 5.2 years ago by ▴ 130
0
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1
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2.8k
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Comment: C: Samtools mplileup detects wrong INDEL positions
6.3 years ago by Gama313 ▴ 130
0
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0
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2.8k
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Comment: C: Samtools mplileup detects wrong INDEL positions
updated 6.3 years ago by 16k • written 6.4 years ago by ▴ 130
0
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1
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2.8k
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Comment: C: Samtools mplileup detects wrong INDEL positions
6.4 years ago by Gama313 ▴ 130
0
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1
reply
2.8k
views
Comment: C: Samtools mplileup detects wrong INDEL positions
updated 6.4 years ago by 16k • written 6.4 years ago by ▴ 130
4
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9
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2.8k
views
Samtools mplileup detects wrong INDEL positions
samtools mpileup variant calling count nuceotides
updated 6.4 years ago by 16k • written 6.4 years ago by ▴ 130
4
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0
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1.5k
views
Answer: A: How separate one column in two columns?
updated 6.4 years ago by 90k • written 6.4 years ago by ▴ 130
0
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2
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2.1k
views
HTSeq count versus summarizeOverlaps, mismathc of exon counts
RNA-Seq
updated 9.0 years ago by 12k • written 9.0 years ago by ▴ 130
35 results • Page 1 of 1
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