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Comment: Comment: Samtools unmapped reads
9 months ago by DNAngel ▴ 240
0
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5
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685
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Samtools unmapped reads
samtools
9 months ago by DNAngel ▴ 240
0
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0
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685
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Comment: Comment: Samtools unmapped reads
9 months ago by DNAngel ▴ 240
0
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0
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752
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Comment: Comment: Samtools mapped and unmapped flags, what is the difference between the flags?
10 months ago by DNAngel ▴ 240
0
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1
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752
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Comment: Comment: Samtools mapped and unmapped flags, what is the difference between the flags?
10 months ago by DNAngel ▴ 240
0
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3
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752
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Samtools mapped and unmapped flags, what is the difference between the flags?
samtools
10 months ago by DNAngel ▴ 240
2
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2
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492
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How do you get functional/biological role of motifs?
JASPAR
updated 10 months ago by 4.2k • written 10 months ago by ▴ 240
0
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1
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910
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Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
10 months ago by DNAngel ▴ 240
0
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1
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910
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Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
10 months ago by DNAngel ▴ 240
0
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2
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910
views
Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
10 months ago by DNAngel ▴ 240
2
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8
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910
views
How to get names and class information from a list of target IDs from the JASPAR database?
JASPAR
updated 10 months ago by 78k • written 10 months ago by ▴ 240
0
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0
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577
views
Comment: Comment: Program to detect cis-regulatory modules for a non model species?
12 months ago by DNAngel ▴ 240
0
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0
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577
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Comment: Comment: Program to detect cis-regulatory modules for a non model species?
12 months ago by DNAngel ▴ 240
3
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3
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577
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Program to detect cis-regulatory modules for a non model species?
factors transcription
12 months ago by DNAngel ▴ 240
0
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1
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614
views
Comment: Comment: How do you find transcription factors in a newly sequenced genome?
13 months ago by DNAngel ▴ 240
4
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3
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614
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How do you find transcription factors in a newly sequenced genome?
interproscan factors transcription
updated 13 months ago by ▴ 20 • written 13 months ago by ▴ 240
1
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1
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774
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
14 months ago by DNAngel ▴ 240
0
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1
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774
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
14 months ago by DNAngel ▴ 240
0
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0
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774
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
14 months ago by DNAngel ▴ 240
0
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1
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774
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
14 months ago by DNAngel ▴ 240
7
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8
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774
views
How do you obtain a list of transcription factors from a genome?
transcription-factor
updated 8 months ago by 41k • written 14 months ago by ▴ 240
0
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6
replies
1.2k
views
Confused about which database to use - nt or nr?
blast
updated 14 months ago by 11k • written 14 months ago by ▴ 240
0
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2
replies
580
views
What happened to the SparCC github repository?
sparcc
updated 19 months ago by ★ 1.8k • written 19 months ago by ▴ 240
0
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0
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4.4k
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Comment: Comment: WGCNA exportNetworkToCytoscape issue!!
23 months ago by DNAngel ▴ 240
2
votes
8
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3.0k
views
Why does Kraken2 not produce taxon percentages with --report flag?
kraken2
updated 23 months ago by ▴ 90 • written 2.6 years ago by ▴ 240
0
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0
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541
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Can I use DESeq2 to analyze my abundance dataset, which also happens to have a lot of zeros?
deseq2
2.2 years ago by DNAngel ▴ 240
0
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0
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1.8k
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Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
2.2 years ago by DNAngel ▴ 240
0
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1
reply
1.8k
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Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
2.2 years ago by DNAngel ▴ 240
0
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4
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1.8k
views
Forum: Is there really a difference in blastn -task blastn and -task megablast when dealing with unmapped reads?
blastn
2.2 years ago by DNAngel ▴ 240
0
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0
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1.2k
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Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
2.2 years ago by DNAngel ▴ 240
0
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1
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1.2k
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Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
2.2 years ago by DNAngel ▴ 240
2
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4
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1.2k
views
WGCNA, what does it mean if no hub genes are identified?
WGCNA
2.2 years ago by DNAngel ▴ 240
1
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0
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527
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R package for determining best model transformation for a dataset?
R
2.3 years ago by DNAngel ▴ 240
0
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1
reply
2.9k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
0
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0
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2.9k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
0
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1
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2.9k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
0
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2
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2.9k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
0
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0
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2.9k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
11
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15
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2.9k
views
Output of samtools view, what does the third column actually represent?
samtools
updated 2.3 years ago by 18k • written 2.3 years ago by ▴ 240
0
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2
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2.9k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
2.3 years ago by DNAngel ▴ 240
0
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0
replies
494
views
How to find out how many reads were used in contig assembly in metaSPADES?
metaspades
2.3 years ago by DNAngel ▴ 240
1
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1
reply
1.2k
views
How do you interpret Tukey's significance when there is no group clustering alone?
Tukey
2.3 years ago by DNAngel ▴ 240
0
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0
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1.2k
views
Answer: Answer: How do you interpret Tukey's significance when there is no group clustering alon
2.3 years ago by DNAngel ▴ 240
1
vote
1
reply
1.1k
views
What is the difference between using -max_target_seqs 1 -max_hsps 1 versus just the defaults and then filtering for top hit?
blast
updated 2.3 years ago by 136k • written 2.3 years ago by ▴ 240
0
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0
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454
views
R vegdist does not compute distances for all my sites
vegan vegdist R
updated 2.3 years ago by 41k • written 2.3 years ago by ▴ 240
3
votes
1
reply
1.6k
views
What is the recommended contig length to filter?
metaspades
updated 2.4 years ago by ★ 25k • written 2.4 years ago by ▴ 240
0
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0
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966
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
2.4 years ago by DNAngel ▴ 240
0
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2
replies
966
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
2.4 years ago by DNAngel ▴ 240
0
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1
reply
966
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
2.4 years ago by DNAngel ▴ 240
2
votes
6
replies
966
views
Is there a different names.dmp file in the taxonomy name/id browser?
ncbi
updated 2.4 years ago by 136k • written 2.4 years ago by ▴ 240
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