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Answer: Answer: Convert Gene symbol to Ensembl ID
18 months ago by vinayjrao ▴ 260
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1
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2.6k
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Answer: Answer: Help with the new nomenclature of multi-nucleotide variants
18 months ago by vinayjrao ▴ 260
2
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1
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1.5k
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Answer: Answer: wANNOVAR memory error
18 months ago by vinayjrao ▴ 260
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0
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983
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Comment: Comment: Visualize and access gvcf/vcf files
18 months ago by vinayjrao ▴ 260
1
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0
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956
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Answer: Answer: Filtering VCF files with bcftools
18 months ago by vinayjrao ▴ 260
0
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0
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734
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Comment: Comment: A question about using HISAT2 without biological replicates
18 months ago by vinayjrao ▴ 260
1
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2
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734
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A question about using HISAT2 without biological replicates
RNA-seq HISAT2
18 months ago by vinayjrao ▴ 260
0
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0
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1.6k
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Comment: Comment: How to decrypt EGA .crypt files?
2.0 years ago by vinayjrao ▴ 260
0
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0
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925
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Comment: Comment: Seeking assistance in scRNA Seq
2.9 years ago by vinayjrao ▴ 260
0
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2
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925
views
Seeking assistance in scRNA Seq
python scRNA-Seq R
2.9 years ago by vinayjrao ▴ 260
0
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2
replies
1.1k
views
Merging bam files
bam merge rna-seq
updated 3.2 years ago by ★ 1.3k • written 3.2 years ago by ▴ 260
0
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0
replies
626
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Variants in untargeted genes identified after targeted exome sequencing analysis
snp exome
3.9 years ago by vinayjrao ▴ 260
0
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0
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3.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
3.9 years ago by vinayjrao ▴ 260
0
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0
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3.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
3.9 years ago by vinayjrao ▴ 260
2
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10
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3.0k
views
Unable to overcome troubles in whole exome analysis
exome-seq markduplicates picard
updated 3.3 years ago by 45k • written 4.0 years ago by ▴ 260
1
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1
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3.0k
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Answer: Answer: Unable to overcome troubles in whole exome analysis
4.0 years ago by vinayjrao ▴ 260
0
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0
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3.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
4.0 years ago by vinayjrao ▴ 260
0
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1
reply
3.0k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
4.0 years ago by vinayjrao ▴ 260
0
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0
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3.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
4.0 years ago by vinayjrao ▴ 260
0
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0
replies
785
views
How to annotate variants against hs37d5?
SNP annotation
4.4 years ago by vinayjrao ▴ 260
7
votes
7
replies
26k
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Calculating fpkm from raw counts
RNA-Seq R fpkm
updated 4.0 years ago by ▴ 10 • written 7.4 years ago by ▴ 260
0
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0
replies
1.1k
views
Is it possible to call variants using cram files?
next-gen sequencing SNP
4.5 years ago by vinayjrao ▴ 260
0
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0
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1.2k
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Unable to convert from cram to bam
SNP software error sequencing next-gen
4.5 years ago by vinayjrao ▴ 260
0
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0
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7.9k
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Comment: C: Issue With CRAM -> BAM -> FASTQ Conversion
4.5 years ago by vinayjrao ▴ 260
0
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0
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2.9k
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Comment: C: Ignore replacing a comma within quotes
4.6 years ago by vinayjrao ▴ 260
0
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1
reply
2.9k
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Comment: C: Ignore replacing a comma within quotes
4.6 years ago by vinayjrao ▴ 260
0
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0
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2.9k
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Comment: C: Ignore replacing a comma within quotes
4.6 years ago by vinayjrao ▴ 260
0
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1
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2.9k
views
Comment: C: Ignore replacing a comma within quotes
4.6 years ago by vinayjrao ▴ 260
2
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8
replies
2.9k
views
Ignore replacing a comma within quotes
sed awk regex
4.6 years ago by vinayjrao ▴ 260
0
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0
replies
2.6k
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Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
4.7 years ago by vinayjrao ▴ 260
0
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1
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2.6k
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Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
4.7 years ago by vinayjrao ▴ 260
10
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4
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2.6k
views
Recalibrating variants in GATK4.1 as compared to GATK3.7
SNP GATK
updated 4.7 years ago by ★ 4.4k • written 4.7 years ago by ▴ 260
0
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1
reply
1.1k
views
Comment: C: Compare elements between rows and columns
4.7 years ago by vinayjrao ▴ 260
2
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3
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1.1k
views
Compare elements between rows and columns
awk shell RNA-Seq
updated 3.3 years ago by 45k • written 4.7 years ago by ▴ 260
0
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1
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2.1k
views
Comment: C: Converting CRAM slices to get a CRAM file
4.8 years ago by vinayjrao ▴ 260
3
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4
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2.1k
views
Converting CRAM slices to get a CRAM file
samtools
updated 4.8 years ago by ★ 1.3k • written 4.8 years ago by ▴ 260
0
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0
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3.5k
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Comment: C: Create files in multiple directories via for loop
4.8 years ago by vinayjrao ▴ 260
0
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1
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3.5k
views
Comment: C: Create files in multiple directories via for loop
4.8 years ago by vinayjrao ▴ 260
0
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1
reply
3.5k
views
Comment: C: Create files in multiple directories via for loop
4.8 years ago by vinayjrao ▴ 260
0
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1
reply
3.5k
views
Comment: C: Create files in multiple directories via for loop
4.8 years ago by vinayjrao ▴ 260
3
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9
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3.5k
views
Create files in multiple directories via for loop
shell linux
4.8 years ago by vinayjrao ▴ 260
0
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0
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2.6k
views
Comment: C: Converting tsv into bam file
4.8 years ago by vinayjrao ▴ 260
1
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3
replies
2.6k
views
Converting tsv into bam file
genome sequencing R linux
updated 4.8 years ago by 15k • written 4.8 years ago by ▴ 260
1
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1
reply
2.2k
views
Answer: C: How to login to dowload datasets from EGA - European Genome-phenome Archive?
4.8 years ago by vinayjrao ▴ 260
3
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3
replies
2.2k
views
How to login to dowload datasets from EGA - European Genome-phenome Archive?
java
4.8 years ago by vinayjrao ▴ 260
1
vote
1
reply
963
views
Appending output to a vector in R
R
updated 5.0 years ago by 3.4k • written 5.0 years ago by ▴ 260
0
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0
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2.8k
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Comment: C: Annotating VCF files
5.0 years ago by vinayjrao ▴ 260
0
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3
replies
2.8k
views
Annotating VCF files
snp
5.0 years ago by vinayjrao ▴ 260
0
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1
reply
1.3k
views
Which of the output files of TrimGalore! must I align?
sequencing alignment SNP
5.0 years ago by vinayjrao ▴ 260
0
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0
replies
1.5k
views
Comment: C: How to annotate variants offline using ANNOVAR?
5.2 years ago by vinayjrao ▴ 260
184 results • Page 1 of 4
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