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268
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Comment: Comment: Seeking assistance in scRNA Seq
11 weeks ago by vinayjrao ▴ 220
0
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2
replies
268
views
Seeking assistance in scRNA Seq
python scRNA-Seq R
11 weeks ago by vinayjrao ▴ 220
0
votes
2
replies
292
views
Merging bam files
bam merge rna-seq
updated 7 months ago by ▴ 560 • written 7 months ago by ▴ 220
0
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0
replies
269
views
Variants in untargeted genes identified after targeted exome sequencing analysis
snp exome
15 months ago by vinayjrao ▴ 220
0
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0
replies
1.3k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
15 months ago by vinayjrao ▴ 220
0
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0
replies
1.3k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
15 months ago by vinayjrao ▴ 220
2
votes
10
replies
1.3k
views
Unable to overcome troubles in whole exome analysis
exome-seq markduplicates picard
updated 7 months ago by 37k • written 16 months ago by ▴ 220
1
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1
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1.3k
views
Answer: Answer: Unable to overcome troubles in whole exome analysis
16 months ago by vinayjrao ▴ 220
0
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0
replies
1.3k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
16 months ago by vinayjrao ▴ 220
0
votes
1
reply
1.3k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
16 months ago by vinayjrao ▴ 220
0
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0
replies
1.3k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
16 months ago by vinayjrao ▴ 220
0
votes
0
replies
414
views
How to annotate variants against hs37d5?
SNP annotation
21 months ago by vinayjrao ▴ 220
3
votes
7
replies
14k
views
Calculating fpkm from raw counts
RNA-Seq R fpkm
updated 16 months ago by • 0 • written 4.8 years ago by ▴ 220
0
votes
0
replies
654
views
Is it possible to call variants using cram files?
next-gen sequencing SNP
22 months ago by vinayjrao ▴ 220
0
votes
0
replies
702
views
Unable to convert from cram to bam
SNP software error sequencing next-gen
22 months ago by vinayjrao ▴ 220
0
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0
replies
4.2k
views
Comment: C: Issue With CRAM -> BAM -> FASTQ Conversion
23 months ago by vinayjrao ▴ 220
0
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0
replies
589
views
Comment: C: Ignore replacing a comma within quotes
23 months ago by vinayjrao ▴ 220
0
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1
reply
589
views
Comment: C: Ignore replacing a comma within quotes
23 months ago by vinayjrao ▴ 220
0
votes
0
replies
589
views
Comment: C: Ignore replacing a comma within quotes
23 months ago by vinayjrao ▴ 220
0
votes
1
reply
589
views
Comment: C: Ignore replacing a comma within quotes
23 months ago by vinayjrao ▴ 220
2
votes
8
replies
589
views
Ignore replacing a comma within quotes
sed awk regex
23 months ago by vinayjrao ▴ 220
0
votes
0
replies
1.2k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
2.0 years ago by vinayjrao ▴ 220
0
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1
reply
1.2k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
2.0 years ago by vinayjrao ▴ 220
10
votes
4
replies
1.2k
views
Recalibrating variants in GATK4.1 as compared to GATK3.7
SNP GATK
updated 2.0 years ago by ★ 1.7k • written 2.0 years ago by ▴ 220
0
votes
1
reply
492
views
Comment: C: Compare elements between rows and columns
2.1 years ago by vinayjrao ▴ 220
2
votes
3
replies
492
views
Compare elements between rows and columns
awk shell RNA-Seq
updated 8 months ago by 37k • written 2.1 years ago by ▴ 220
0
votes
1
reply
953
views
Comment: C: Converting CRAM slices to get a CRAM file
2.1 years ago by vinayjrao ▴ 220
3
votes
4
replies
953
views
Converting CRAM slices to get a CRAM file
samtools
updated 2.1 years ago by ▴ 950 • written 2.1 years ago by ▴ 220
0
votes
0
replies
1.8k
views
Comment: C: Create files in multiple directories via for loop
2.2 years ago by vinayjrao ▴ 220
0
votes
1
reply
1.8k
views
Comment: C: Create files in multiple directories via for loop
2.2 years ago by vinayjrao ▴ 220
0
votes
1
reply
1.8k
views
Comment: C: Create files in multiple directories via for loop
2.2 years ago by vinayjrao ▴ 220
0
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1
reply
1.8k
views
Comment: C: Create files in multiple directories via for loop
2.2 years ago by vinayjrao ▴ 220
3
votes
9
replies
1.8k
views
Create files in multiple directories via for loop
shell linux
2.2 years ago by vinayjrao ▴ 220
0
votes
0
replies
1.4k
views
Comment: C: Converting tsv into bam file
2.2 years ago by vinayjrao ▴ 220
1
vote
3
replies
1.4k
views
Converting tsv into bam file
genome sequencing R linux
updated 2.2 years ago by 13k • written 2.2 years ago by ▴ 220
1
vote
1
reply
1.1k
views
Answer: C: How to login to dowload datasets from EGA - European Genome-phenome Archive?
2.2 years ago by vinayjrao ▴ 220
3
votes
3
replies
1.1k
views
How to login to dowload datasets from EGA - European Genome-phenome Archive?
java
2.2 years ago by vinayjrao ▴ 220
1
vote
1
reply
413
views
Appending output to a vector in R
R
updated 2.3 years ago by 2.7k • written 2.3 years ago by ▴ 220
0
votes
0
replies
1.3k
views
Comment: C: Annotating VCF files
2.3 years ago by vinayjrao ▴ 220
0
votes
3
replies
1.3k
views
Annotating VCF files
snp
2.3 years ago by vinayjrao ▴ 220
0
votes
1
reply
744
views
Which of the output files of TrimGalore! must I align?
sequencing alignment SNP
2.4 years ago by vinayjrao ▴ 220
0
votes
0
replies
766
views
Comment: C: How to annotate variants offline using ANNOVAR?
2.5 years ago by vinayjrao ▴ 220
0
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1
reply
766
views
Comment: C: How to annotate variants offline using ANNOVAR?
2.5 years ago by vinayjrao ▴ 220
0
votes
4
replies
766
views
How to annotate variants offline using ANNOVAR?
SNP
2.5 years ago by vinayjrao ▴ 220
0
votes
0
replies
390
views
Filtering wANNOVAR output on terminal
SNP
2.6 years ago by vinayjrao ▴ 220
1
vote
1
reply
541
views
What type of duplicates are to be removed while analyzing whole exome data?
SNP Exome-Seq
2.6 years ago by vinayjrao ▴ 220
7
votes
5
replies
669
views
Correlation between coverage and variant calling
Exome-Seq SNP variant_calling
updated 2.9 years ago by ▴ 430 • written 2.9 years ago by ▴ 220
0
votes
0
replies
669
views
Comment: C: Correlation between coverage and variant calling
2.9 years ago by vinayjrao ▴ 220
1
vote
14
replies
7.3k
views
Ballgown Error in file(file, "rt") : invalid 'description' argument
RNA-Seq ballgown
updated 3.4 years ago by ▴ 10 • written 5.4 years ago by ▴ 220
10
votes
1
reply
32k
views
Interpreting GSEA enrichment plots/results
RNA-Seq gsea
updated 3.5 years ago by ▴ 50 • written 3.9 years ago by ▴ 220
176 results • Page 1 of 4
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