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709
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Answer: Answer: Convert Gene symbol to Ensembl ID
6 weeks ago by vinayjrao ▴ 250
0
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1
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858
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Answer: Answer: Help with the new nomenclature of multi-nucleotide variants
7 weeks ago by vinayjrao ▴ 250
2
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1
reply
588
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Answer: Answer: wANNOVAR memory error
7 weeks ago by vinayjrao ▴ 250
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0
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235
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Comment: Comment: Visualize and access gvcf/vcf files
7 weeks ago by vinayjrao ▴ 250
1
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0
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281
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Answer: Answer: Filtering VCF files with bcftools
7 weeks ago by vinayjrao ▴ 250
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0
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283
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Comment: Comment: A question about using HISAT2 without biological replicates
8 weeks ago by vinayjrao ▴ 250
1
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2
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283
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A question about using HISAT2 without biological replicates
RNA-seq HISAT2
8 weeks ago by vinayjrao ▴ 250
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0
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1.0k
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Comment: Comment: How to decrypt EGA .crypt files?
7 months ago by vinayjrao ▴ 250
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0
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575
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Comment: Comment: Seeking assistance in scRNA Seq
17 months ago by vinayjrao ▴ 250
0
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2
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575
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Seeking assistance in scRNA Seq
python scRNA-Seq R
17 months ago by vinayjrao ▴ 250
0
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2
replies
621
views
Merging bam files
bam merge rna-seq
updated 22 months ago by ★ 1.1k • written 22 months ago by ▴ 250
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0
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443
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Variants in untargeted genes identified after targeted exome sequencing analysis
snp exome
2.5 years ago by vinayjrao ▴ 250
0
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0
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2.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
2.5 years ago by vinayjrao ▴ 250
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0
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2.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
2.5 years ago by vinayjrao ▴ 250
2
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10
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2.0k
views
Unable to overcome troubles in whole exome analysis
exome-seq markduplicates picard
updated 22 months ago by 43k • written 2.6 years ago by ▴ 250
1
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1
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2.0k
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Answer: Answer: Unable to overcome troubles in whole exome analysis
2.6 years ago by vinayjrao ▴ 250
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0
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2.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
2.6 years ago by vinayjrao ▴ 250
0
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1
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2.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
2.6 years ago by vinayjrao ▴ 250
0
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0
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2.0k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
2.6 years ago by vinayjrao ▴ 250
0
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0
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611
views
How to annotate variants against hs37d5?
SNP annotation
3.0 years ago by vinayjrao ▴ 250
6
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7
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21k
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Calculating fpkm from raw counts
RNA-Seq R fpkm
updated 2.6 years ago by ▴ 10 • written 6.0 years ago by ▴ 250
0
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0
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881
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Is it possible to call variants using cram files?
next-gen sequencing SNP
3.1 years ago by vinayjrao ▴ 250
0
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0
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966
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Unable to convert from cram to bam
SNP software error sequencing next-gen
3.1 years ago by vinayjrao ▴ 250
0
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0
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6.0k
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Comment: C: Issue With CRAM -> BAM -> FASTQ Conversion
3.1 years ago by vinayjrao ▴ 250
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0
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1.6k
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Comment: C: Ignore replacing a comma within quotes
3.2 years ago by vinayjrao ▴ 250
0
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1
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1.6k
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Comment: C: Ignore replacing a comma within quotes
3.2 years ago by vinayjrao ▴ 250
0
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0
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1.6k
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Comment: C: Ignore replacing a comma within quotes
3.2 years ago by vinayjrao ▴ 250
0
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1
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1.6k
views
Comment: C: Ignore replacing a comma within quotes
3.2 years ago by vinayjrao ▴ 250
2
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8
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1.6k
views
Ignore replacing a comma within quotes
sed awk regex
3.2 years ago by vinayjrao ▴ 250
0
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0
replies
1.8k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
3.3 years ago by vinayjrao ▴ 250
0
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1
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1.8k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
3.3 years ago by vinayjrao ▴ 250
10
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4
replies
1.8k
views
Recalibrating variants in GATK4.1 as compared to GATK3.7
SNP GATK
updated 3.3 years ago by ★ 4.3k • written 3.3 years ago by ▴ 250
0
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1
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715
views
Comment: C: Compare elements between rows and columns
3.3 years ago by vinayjrao ▴ 250
2
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3
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715
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Compare elements between rows and columns
awk shell RNA-Seq
updated 23 months ago by 43k • written 3.3 years ago by ▴ 250
0
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1
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1.4k
views
Comment: C: Converting CRAM slices to get a CRAM file
3.4 years ago by vinayjrao ▴ 250
3
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4
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1.4k
views
Converting CRAM slices to get a CRAM file
samtools
updated 3.4 years ago by ★ 1.2k • written 3.4 years ago by ▴ 250
0
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0
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2.6k
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Comment: C: Create files in multiple directories via for loop
3.4 years ago by vinayjrao ▴ 250
0
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1
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2.6k
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Comment: C: Create files in multiple directories via for loop
3.4 years ago by vinayjrao ▴ 250
0
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1
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2.6k
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Comment: C: Create files in multiple directories via for loop
3.4 years ago by vinayjrao ▴ 250
0
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1
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2.6k
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Comment: C: Create files in multiple directories via for loop
3.4 years ago by vinayjrao ▴ 250
3
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9
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2.6k
views
Create files in multiple directories via for loop
shell linux
3.4 years ago by vinayjrao ▴ 250
0
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0
replies
2.0k
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Comment: C: Converting tsv into bam file
3.4 years ago by vinayjrao ▴ 250
1
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3
replies
2.0k
views
Converting tsv into bam file
genome sequencing R linux
updated 3.4 years ago by 14k • written 3.4 years ago by ▴ 250
1
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1
reply
1.6k
views
Answer: C: How to login to dowload datasets from EGA - European Genome-phenome Archive?
3.4 years ago by vinayjrao ▴ 250
3
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3
replies
1.6k
views
How to login to dowload datasets from EGA - European Genome-phenome Archive?
java
3.4 years ago by vinayjrao ▴ 250
1
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1
reply
636
views
Appending output to a vector in R
R
updated 3.6 years ago by 3.2k • written 3.6 years ago by ▴ 250
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0
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1.9k
views
Comment: C: Annotating VCF files
3.6 years ago by vinayjrao ▴ 250
0
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3
replies
1.9k
views
Annotating VCF files
snp
3.6 years ago by vinayjrao ▴ 250
0
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1
reply
966
views
Which of the output files of TrimGalore! must I align?
sequencing alignment SNP
3.6 years ago by vinayjrao ▴ 250
0
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0
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1.1k
views
Comment: C: How to annotate variants offline using ANNOVAR?
3.8 years ago by vinayjrao ▴ 250
184 results • Page 1 of 4
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