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0
votes
0
replies
259
views
Answer:
Answer: Autosome/ sex chromosome assembly error
1 day ago by
Kevin Blighe
89k
0
votes
0
replies
309
views
Answer:
Answer: How should I interpret GSEA results for the C6: Oncogenic Signatures collection
14 hours ago by
Kevin Blighe
89k
0
votes
0
replies
268
views
Answer:
Answer: Polyadenylation-PAS sites APAlyzer
1 day ago by
Kevin Blighe
89k
0
votes
0
replies
326
views
Answer:
Answer: Mixed marker expression in Xenium data
1 day ago by
Kevin Blighe
89k
2
votes
0
replies
353
views
Answer:
Answer: Help interpreting antiSMASH BGCs for EPA (eicosapentaenoic acid) biosynthesis
1 day ago by
Kevin Blighe
89k
0
votes
0
replies
223
views
Answer:
Answer: Comparison of different RNAseq data sets
14 hours ago by
Kevin Blighe
89k
0
votes
0
replies
107
views
Answer:
Answer: reference genome into chromosomes but annotation only at scaffolds level
1 day ago by
Kevin Blighe
89k
1
vote
1
reply
215
views
Answer:
Answer: Batch Effect
1 day ago by
Kevin Blighe
89k
108
votes
110
replies
67k
views
29 follow
Tutorial:
Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
1000genomes
PLINK
PCA
updated 10 months ago by
Niharika
• 0 • written 7.2 years ago by
Kevin Blighe
89k
13
votes
9
replies
10k
views
6 follow
Tutorial:
STARsolo config for 10x Chromium v1, v2, v3
Chromium
10x
STARsolo
STAR
updated 14 months ago by
GenoMax
154k • written 5.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
846
views
Answer:
Answer: Met 500 data
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.4k
views
Comment:
Comment: How to View Peaks from ChIP-seq Data generated using old reference genome (hg18)
16 hours ago by
Kevin Blighe
89k
0
votes
0
replies
5.8k
views
Comment:
Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.1k
views
Answer:
Answer: 3 samples (control) vs 3 samples (condition) 100M coverage data
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.3k
views
Answer:
Answer: Explaining my heatmap for PC1 and my PC2 with gene list
14 months ago by
Kevin Blighe
89k
1
vote
0
replies
1.3k
views
Answer:
Answer: How to deal with warnings from PLINK while performing QC using HAPMAP data ?
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.1k
views
Answer:
Answer: GWAS on traits non-normally distributed
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
3.3k
views
Answer:
Answer: DEseq2 on expected counts
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
953
views
Answer:
Answer: VCF files
14 months ago by
Kevin Blighe
89k
1
vote
0
replies
794
views
Answer:
Answer: Values of relatedness matrix exceed 0 and 1
14 months ago by
Kevin Blighe
89k
0
votes
1
reply
2.2k
views
Answer:
Answer: rna-seq heatmap z-score calculation - TPM?
14 months ago by
Kevin Blighe
89k
0
votes
1
reply
5.8k
views
Comment:
Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
14 months ago by
Kevin Blighe
89k
0
votes
1
reply
1.8k
views
Comment:
Comment: PLINK error doing a GWAS
14 months ago by
Kevin Blighe
89k
0
votes
1
reply
1.7k
views
Answer:
Answer: Analyzing PCA Clustering from PLINK Output
14 months ago by
Kevin Blighe
89k
0
votes
2
replies
5.8k
views
Answer:
Answer: Current best practive to liftOver many SNVs from hg19 to GRCh38
14 months ago by
Kevin Blighe
89k
1
vote
1
reply
1.6k
views
Answer:
Answer: gene naming
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.2k
views
Answer:
Answer: Affymetrix microarray
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.0k
views
Answer:
Answer: Why does 1 variant produce 3 genes as a result?
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.5k
views
Answer:
Answer: Batch correction in RNAseq
14 months ago by
Kevin Blighe
89k
2
votes
0
replies
1.0k
views
Answer:
Answer: WGCNA - dendogram: How to interpret alterations of clusters
14 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.3k
views
Answer:
Answer: Batch Effect Correction in RNA-seq Data Using SVA and DESeq2
14 months ago by
Kevin Blighe
89k
8
votes
4
replies
5.5k
views
Tutorial:
Automated dbSNP lookup by rsID position, plus genome build liftover
rsid
hg19
liftover
hg38
dbsnp
updated 14 months ago by
codingzombie
• 0 • written 3.2 years ago by
Kevin Blighe
89k
0
votes
2
replies
1.6k
views
Answer:
Answer: Volcano plot with different font size for gene labels
updated 16 months ago by
Ram
45k • written 16 months ago by
Kevin Blighe
89k
1
vote
1
reply
1.2k
views
Comment:
Comment: FDA approved Biomarker database access
16 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.4k
views
Comment:
Comment: Bulk rna sequencing
16 months ago by
Kevin Blighe
89k
0
votes
0
replies
1.4k
views
Comment:
Comment: Bulk rna sequencing
16 months ago by
Kevin Blighe
89k
0
votes
1
reply
1.2k
views
Answer:
Answer: FDA approved Biomarker database access
16 months ago by
Kevin Blighe
89k
0
votes
0
replies
2.2k
views
Answer:
Answer: Heatmap and rna-seq
18 months ago by
Kevin Blighe
89k
0
votes
0
replies
26k
views
Comment:
Comment: Clustering of DAVID gene enrichment results from gene expression studies
18 months ago by
Kevin Blighe
89k
76
votes
72
replies
26k
views
19 follow
Tutorial:
Clustering of DAVID gene enrichment results from gene expression studies
enrichment
david
18 months ago by
Kevin Blighe
89k
1
vote
1
reply
1.1k
views
Comment:
Comment: WGCNA
19 months ago by
Kevin Blighe
89k
2
votes
1
reply
1.0k
views
Answer:
Answer: Convert to ENTREZGENE
updated 19 months ago by
Ram
45k • written 19 months ago by
Kevin Blighe
89k
10
votes
6
replies
6.6k
views
Tutorial:
CorLevelPlot - Visualise correlation results, e.g., clinical parameter correlations
correlation
corlevelplot
updated 19 months ago by
Ram
45k • written 7.7 years ago by
Kevin Blighe
89k
2
votes
1
reply
1.1k
views
Answer:
Answer: Microarray analysis using Limma
22 months ago by
Kevin Blighe
89k
0
votes
1
reply
4.0k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
updated 22 months ago by
Ram
45k • written 22 months ago by
Kevin Blighe
89k
0
votes
0
replies
2.4k
views
Comment:
Comment: Deseq2 returned the same p-adj for several genes
updated 22 months ago by
Ram
45k • written 22 months ago by
Kevin Blighe
89k
0
votes
1
reply
2.4k
views
Comment:
Comment: Deseq2 returned the same p-adj for several genes
updated 22 months ago by
Ram
45k • written 22 months ago by
Kevin Blighe
89k
0
votes
1
reply
2.4k
views
Comment:
Comment: Deseq2 returned the same p-adj for several genes
updated 22 months ago by
Ram
45k • written 22 months ago by
Kevin Blighe
89k
4
votes
1
reply
1.5k
views
Answer:
Answer: ICD9 versus ID10 in UK BRAP
22 months ago by
Kevin Blighe
89k
1
vote
1
reply
2.4k
views
Comment:
Comment: Deseq2 returned the same p-adj for several genes
updated 22 months ago by
Ram
45k • written 22 months ago by
Kevin Blighe
89k
9,921 results • Page
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