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262
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How to create a haplotype map?
picard haplotype CrosscheckFingerprints
updated 6 months ago by 41k • written 6 months ago by ▴ 30
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5
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1.4k
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Mutect2 is not detecting all available cores (multithreading)
exomes parallelization mutect2
11 months ago by jgarces ▴ 30
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0
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1.4k
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Answer: Answer: Mutect2 is not detecting all available cores (multithreading)
11 months ago by jgarces ▴ 30
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1
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1.4k
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Comment: Comment: Mutect2 is not detecting all available cores (multithreading)
11 months ago by jgarces ▴ 30
1
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3
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826
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BCL compression
compression demultiplexing illumina BCL
updated 13 months ago by 99k • written 13 months ago by ▴ 30
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1
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1.2k
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Comment: Comment: Low mapping rate due to rRNA
18 months ago by jgarces ▴ 30
4
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6
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1.2k
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Low mapping rate due to rRNA
RNA-seq rRNA STAR
updated 18 months ago by ★ 1.5k • written 18 months ago by ▴ 30
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0
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1.2k
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Comment: Comment: Low mapping rate due to rRNA
18 months ago by jgarces ▴ 30
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0
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757
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Comment: Comment: Combine full-length and 3` RNAseq, is it possible?
20 months ago by jgarces ▴ 30
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0
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448
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Comment: Comment: Study of similarity (contrary to differential expression analysis)
20 months ago by jgarces ▴ 30
2
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2
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448
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Study of similarity (contrary to differential expression analysis)
RNAseq expression analysis differential correlation
20 months ago by jgarces ▴ 30
3
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4
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757
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Combine full-length and 3` RNAseq, is it possible?
ExperimentalDesign RNAseq
20 months ago by jgarces ▴ 30
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5
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1.7k
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Weird volcano plot
RNA-Seq volcano
updated 2.9 years ago by 20 • written 3.0 years ago by ▴ 30
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0
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1.7k
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Comment: C: Weird volcano plot
3.0 years ago by jgarces ▴ 30
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1
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1.7k
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Comment: C: Weird volcano plot
3.0 years ago by jgarces ▴ 30
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0
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3.4k
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Answer: A: clusterProfiler::enrichGO() is getting very slow
3.4 years ago by jgarces ▴ 30
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0
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2.4k
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Comment: C: Weird MA-plot (DESeq2)
3.6 years ago by jgarces ▴ 30
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1
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2.4k
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Comment: C: Weird MA-plot (DESeq2)
3.6 years ago by jgarces ▴ 30
3
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7
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2.4k
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Weird MA-plot (DESeq2)
RNA-Seq DESeq2 confounders
updated 3.6 years ago by 12k • written 3.6 years ago by ▴ 30
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1
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2.4k
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Comment: C: Weird MA-plot (DESeq2)
3.6 years ago by jgarces ▴ 30
1
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2
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721
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Multiple N bases in RNAseq
RNA-Seq Illumina
3.9 years ago by jgarces ▴ 30
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0
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721
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Comment: C: Multiple N bases in RNAseq
3.9 years ago by jgarces ▴ 30
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0
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4.9k
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Comment: C: PyClone without copy number data
4.4 years ago by jgarces ▴ 30
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0
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600
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Activator o repressor protein in a pathway
pathway
4.5 years ago by jgarces ▴ 30
1
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1
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1.3k
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Comment: C: GISTIC2, some missing samples during the process
4.6 years ago by jgarces ▴ 30
2
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3
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1.3k
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GISTIC2, some missing samples during the process
gistic2
4.6 years ago by jgarces ▴ 30
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0
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1.3k
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Answer: A: Rawcopy copy number analysis
4.7 years ago by jgarces ▴ 30
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1
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1.9k
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Comment: C: CDF file for Cytoscan arrays
4.8 years ago by jgarces ▴ 30
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3
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1.9k
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CDF file for Cytoscan arrays
array Cystoscan CDF
4.8 years ago by jgarces ▴ 30
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0
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2.5k
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Comment: C: cdf environment for cytoscan hd array
4.8 years ago by jgarces ▴ 30
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0
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2.3k
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Comment: C: How to find CNV or CN state information from rawcopy output ?
4.8 years ago by jgarces ▴ 30
0
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1
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3.6k
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Comment: C: High Kmer Content in middle of the read
5.1 years ago by jgarces ▴ 30
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1
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3.6k
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Answer: A: High Kmer Content in middle of the read
5.1 years ago by jgarces ▴ 30
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0
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3.9k
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Answer: A: Varscan2 copynumber 'Parsing Exception' error
5.1 years ago by jgarces ▴ 30
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0
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5.3k
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Comment: C: Why different tSNE plot with Seurat and Monocle if they'r using the same R packa
5.5 years ago by jgarces ▴ 30
2
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3
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5.3k
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Why different tSNE plot with Seurat and Monocle if they'r using the same R package?
single-cell tsne R Seurat monocle
updated 5.5 years ago by ▴ 110 • written 5.5 years ago by ▴ 30
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2
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2.8k
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Comment: C: Create a custom exome .genome for IGV
5.8 years ago by jgarces ▴ 30
0
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1
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2.8k
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Comment: C: Create a custom exome .genome for IGV
5.8 years ago by jgarces ▴ 30
0
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8
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2.8k
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Create a custom exome .genome for IGV
IGV exome sequencing WES
updated 5.8 years ago by 35k • written 5.8 years ago by ▴ 30
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