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Comment:
Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
14 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
720
views
Comment:
Comment: Online training - Introduction to Nextflow
14 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
3.3k
views
Comment:
Comment: Tutorial for analysing gpr files of microarray
14 months ago by
rohitsatyam102
▴ 750
3
votes
1
reply
443
views
GO Term Analysis in scRNASeq data with low number of genes expressed
scrnaseq
Seurat
updated 14 months ago by
mark.ziemann
★ 1.8k • written 14 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
2.5k
views
Comment:
Comment: Big difference in estimated duplicate reads between forward and reverse of paire
15 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
2.5k
views
Comment:
Comment: Big difference in estimated duplicate reads between forward and reverse of paire
15 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.6k
views
Comment:
Comment: How to use SingleR for annotating single-cell transcriptomics dataset with our o
17 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
2.1k
views
Comment:
Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
18 months ago by
rohitsatyam102
▴ 750
4
votes
0
replies
2.3k
views
Forum:
Correct method of Merging/Integrating multiple single cell dataset using Seurat
seurat
scrnaseq
18 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
6.4k
views
Comment:
Comment: SCTransform prior or after merging samples into one object?
18 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
10.0k
views
Comment:
Comment: FindAllMarkers pct1 and pct2
18 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
10.0k
views
Comment:
Comment: FindAllMarkers pct1 and pct2
18 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
2.2k
views
Comment:
Comment: Running fastq_screen on your data
18 months ago by
rohitsatyam102
▴ 750
3
votes
2
replies
2.2k
views
Tutorial:
Running fastq_screen on your data
fastqscreen
18 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
666
views
Interpreting the Jackstraw plot of Seurat
genomics
seurat
plot
scrnaseq
19 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
2.1k
views
Comment:
Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
19 months ago by
rohitsatyam102
▴ 750
4
votes
4
replies
2.1k
views
How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
scrnaseq
Seurat
18 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.8k
views
Comment:
Comment: Mitochondrial percentage in Seurat
19 months ago by
rohitsatyam102
▴ 750
2
votes
0
replies
620
views
Forum:
How to download multiple .gz files from Ensembl Protists database
wget
protist
ensembl
19 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
378
views
How to update gff/gtf files after using Mauve Config Mover
assembly
genome
Mauve
19 months ago by
rohitsatyam102
▴ 750
0
votes
0
replies
8.7k
views
Comment:
Comment: Mauve Contig Mover
23 months ago by
rohitsatyam102
▴ 750
0
votes
1
reply
1.1k
views
Comment:
Comment: Quick questions about Alevin and AlevinQC
2.0 years ago by
rohitsatyam102
▴ 750
2
votes
3
replies
1.1k
views
Quick questions about Alevin and AlevinQC
alevinqc
alevin
updated 2.0 years ago by
ATpoint
77k • written 2.0 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
3.6k
views
Comment:
Comment: Is the ENSEMBL FTP down?
2.1 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
3.6k
views
Comment:
Comment: Is the ENSEMBL FTP down?
2.1 years ago by
rohitsatyam102
▴ 750
0
votes
2
replies
3.6k
views
Comment:
Comment: Is the ENSEMBL FTP down?
2.1 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
22k
views
Answer:
Answer: htseq-counts output merge into one matrix ??
2.1 years ago by
rohitsatyam102
▴ 750
2
votes
2
replies
682
views
How to use RINalyzer plugin in cytoscape
cytoscape
RINalyzer
networks
updated 2.2 years ago by
Scooter
▴ 180 • written 2.2 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.7k
views
Comment:
Comment: Prediction error with libsvm
2.2 years ago by
rohitsatyam102
▴ 750
0
votes
1
reply
12k
views
Comment:
Comment: Confusion about FindMarkers(), FindVariableFeatures(), RunTSNE(), and RunUMAP()
2.4 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.2k
views
Comment:
Comment: Parsing Dates from Multiple Websites
2.4 years ago by
rohitsatyam102
▴ 750
50
votes
14
replies
75k
views
10 follow
Tutorial:
Using R in Conda
R
updated 6 months ago by
Ram
40k • written 3.2 years ago by
rohitsatyam102
▴ 750
0
votes
1
reply
1.2k
views
Comment:
Comment: Parsing Dates from Multiple Websites
2.4 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.2k
views
Comment:
Comment: Parsing Dates from Multiple Websites
2.4 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
75k
views
Comment:
Comment: Using R in Conda
2.4 years ago by
rohitsatyam102
▴ 750
6
votes
3
replies
75k
views
Answer:
Answer: Using R in Conda
updated 2.4 years ago by
Ram
40k • written 2.4 years ago by
rohitsatyam102
▴ 750
2
votes
8
replies
1.2k
views
Parsing Dates from Multiple Websites
R
updated 2.4 years ago by
cpad0112
21k • written 2.4 years ago by
rohitsatyam102
▴ 750
0
votes
1
reply
1.6k
views
Which VCF's to use for BQSR in GATK
GATK
BQSR
next-gen-sequencing
updated 6 months ago by
Ram
40k • written 3.6 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
8.1k
views
Comment:
C: Retrieve mutation position and ID for a mutation in hgvs format
2.7 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
1.6k
views
Comment:
C: What does minoverlap = 1L means?
2.8 years ago by
rohitsatyam102
▴ 750
7
votes
1
reply
6.4k
views
Forum:
What are chromatin states ?
genome
ChIP-Seq
updated 4 months ago by
Ram
40k • written 3.9 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
580
views
MNAse-Seq Dataset for Different Cancer Types
Cancer
bigwig
Mnaseseq
updated 6 months ago by
Ram
40k • written 2.8 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
2.6k
views
Comment:
C: Crucial difference between dexseq and HTSeq-count
2.9 years ago by
rohitsatyam102
▴ 750
0
votes
1
reply
1.2k
views
Comment:
C: DRIMSeq with more than 2 categories in the group
3.0 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
545
views
RNAseq of rice is super weird
rna-seq
RNA-Seq
sequence
genome
3.0 years ago by
rohitsatyam102
▴ 750
2
votes
1
reply
2.5k
views
What packages/tools are available to use SJ.out.tab file obtained from STAR
RNA-Seq
R
next-gen
sequence
rna-seq
updated 3.0 years ago by
brown.annaleigh
▴ 10 • written 3.0 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
5.4k
views
Comment:
C: AGAT - Another Gff Analysis Toolkit
3.0 years ago by
rohitsatyam102
▴ 750
0
votes
1
reply
5.4k
views
Comment:
C: AGAT - Another Gff Analysis Toolkit
3.0 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
2.9k
views
Comment:
C: GO annotation for rice in an R package
3.0 years ago by
rohitsatyam102
▴ 750
0
votes
0
replies
4.5k
views
Comment:
C: EnhancedVolcano questions on parameters, arguments can set
3.0 years ago by
rohitsatyam102
▴ 750
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