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6
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5
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1.9k
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how to pass trimmed fastP output to bwa in Nextflow
fastp bwa nextflow
22 months ago by rohitsatyam102 ▴ 900
0
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1
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1.9k
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Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
22 months ago by rohitsatyam102 ▴ 900
0
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0
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2.5k
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Comment: Comment: bcl2fastq dumps most of the reads as undetermined
23 months ago by rohitsatyam102 ▴ 900
0
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0
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2.5k
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Comment: Comment: bcl2fastq dumps most of the reads as undetermined
23 months ago by rohitsatyam102 ▴ 900
0
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4
replies
1.5k
views
convert a list of plotly plots to an HTML output
ggplot2 bam plotly coverage
updated 23 months ago by 14k • written 23 months ago by ▴ 900
5
votes
4
replies
2.5k
views
bcl2fastq dumps most of the reads as undetermined
bcl2fastq
23 months ago by rohitsatyam102 ▴ 900
0
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1
reply
1.5k
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Comment: Comment: convert a list of plotly plots to an HTML output
23 months ago by rohitsatyam102 ▴ 900
0
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0
replies
3.8k
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Comment: Comment: reduce space between X-axis ticks
23 months ago by rohitsatyam102 ▴ 900
2
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6
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3.8k
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reduce space between X-axis ticks
R GSEA
23 months ago by rohitsatyam102 ▴ 900
0
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0
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3.8k
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Comment: Comment: reduce space between X-axis ticks
23 months ago by rohitsatyam102 ▴ 900
0
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1
reply
3.8k
views
Comment: Comment: reduce space between X-axis ticks
23 months ago by rohitsatyam102 ▴ 900
1
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0
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1.1k
views
Tutorial: Making LDA Score plot
LDA metagenomics
23 months ago by rohitsatyam102 ▴ 900
0
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1
reply
19k
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Comment: Comment: RNA-Seq analysis using STAR and Salmon
23 months ago by rohitsatyam102 ▴ 900
0
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0
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425
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Make parts of process run once and other parts as loop
nextflow sars nextclade covid
2.0 years ago by rohitsatyam102 ▴ 900
0
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0
replies
1.1k
views
Comment: Comment: Nextflow printing help message even when params.help is false
2.1 years ago by rohitsatyam102 ▴ 900
6
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2
replies
1.1k
views
Nextflow printing help message even when params.help is false
nextflow align bwa alignment
2.1 years ago by rohitsatyam102 ▴ 900
0
votes
6
replies
1.5k
views
Nextflow runs Successfully but output files are empty. How to debug?
nextflow bcftools
2.1 years ago by rohitsatyam102 ▴ 900
0
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0
replies
1.5k
views
Answer: Answer: Nextflow runs Successfully but output files are empty. How to debug?
2.1 years ago by rohitsatyam102 ▴ 900
0
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0
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1.5k
views
Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
2.1 years ago by rohitsatyam102 ▴ 900
0
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1
reply
1.5k
views
Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
2.1 years ago by rohitsatyam102 ▴ 900
1
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1
reply
2.5k
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Comment: Comment: Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
2.1 years ago by rohitsatyam102 ▴ 900
3
votes
3
replies
2.5k
views
Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
nextflow fastqc
updated 2.1 years ago by 84k • written 2.1 years ago by ▴ 900
0
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0
replies
2.4k
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Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.1 years ago by rohitsatyam102 ▴ 900
0
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0
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2.4k
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Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.1 years ago by rohitsatyam102 ▴ 900
3
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5
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2.4k
views
Using shell command in Nextflow DSL=2 for BWA mem aligner
nextflow alihnment align bwa
2.1 years ago by rohitsatyam102 ▴ 900
0
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1
reply
2.4k
views
Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.1 years ago by rohitsatyam102 ▴ 900
0
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1
reply
1.0k
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Comment: Comment: Online training - Introduction to Nextflow
2.1 years ago by rohitsatyam102 ▴ 900
0
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0
replies
4.0k
views
Comment: Comment: Tutorial for analysing gpr files of microarray
2.2 years ago by rohitsatyam102 ▴ 900
3
votes
1
reply
664
views
GO Term Analysis in scRNASeq data with low number of genes expressed
scrnaseq Seurat
updated 2.2 years ago by ★ 1.9k • written 2.2 years ago by ▴ 900
0
votes
0
replies
3.2k
views
Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
2.2 years ago by rohitsatyam102 ▴ 900
0
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1
reply
3.2k
views
Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
2.2 years ago by rohitsatyam102 ▴ 900
0
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0
replies
2.0k
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Comment: Comment: How to use SingleR for annotating single-cell transcriptomics dataset with our o
2.4 years ago by rohitsatyam102 ▴ 900
0
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1
reply
2.9k
views
Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
2.4 years ago by rohitsatyam102 ▴ 900
5
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0
replies
3.1k
views
Forum: Correct method of Merging/Integrating multiple single cell dataset using Seurat
seurat scrnaseq
2.5 years ago by rohitsatyam102 ▴ 900
0
votes
0
replies
8.2k
views
Comment: Comment: SCTransform prior or after merging samples into one object?
2.5 years ago by rohitsatyam102 ▴ 900
0
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1
reply
13k
views
Comment: Comment: FindAllMarkers pct1 and pct2
2.5 years ago by rohitsatyam102 ▴ 900
0
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1
reply
13k
views
Comment: Comment: FindAllMarkers pct1 and pct2
2.5 years ago by rohitsatyam102 ▴ 900
0
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0
replies
3.2k
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Comment: Comment: Running fastq_screen on your data
2.5 years ago by rohitsatyam102 ▴ 900
3
votes
2
replies
3.2k
views
Tutorial: Running fastq_screen on your data
fastqscreen
2.5 years ago by rohitsatyam102 ▴ 900
1
vote
0
replies
941
views
Interpreting the Jackstraw plot of Seurat
genomics seurat plot scrnaseq
2.5 years ago by rohitsatyam102 ▴ 900
0
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1
reply
2.9k
views
Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
2.5 years ago by rohitsatyam102 ▴ 900
5
votes
5
replies
2.9k
views
How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
scrnaseq Seurat
updated 8 weeks ago by • 0 • written 2.5 years ago by ▴ 900
0
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0
replies
2.4k
views
Comment: Comment: Mitochondrial percentage in Seurat
2.5 years ago by rohitsatyam102 ▴ 900
3
votes
1
reply
1.1k
views
Forum: How to download multiple .gz files from Ensembl Protists database
wget protist ensembl
updated 6 months ago by ★ 2.1k • written 2.5 years ago by ▴ 900
0
votes
0
replies
540
views
How to update gff/gtf files after using Mauve Config Mover
assembly genome Mauve
2.5 years ago by rohitsatyam102 ▴ 900
0
votes
0
replies
9.4k
views
Comment: Comment: Mauve Contig Mover
2.9 years ago by rohitsatyam102 ▴ 900
0
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1
reply
1.5k
views
Comment: Comment: Quick questions about Alevin and AlevinQC
3.0 years ago by rohitsatyam102 ▴ 900
2
votes
3
replies
1.5k
views
Quick questions about Alevin and AlevinQC
alevinqc alevin
updated 3.0 years ago by 84k • written 3.0 years ago by ▴ 900
0
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0
replies
4.2k
views
Comment: Comment: Is the ENSEMBL FTP down?
3.0 years ago by rohitsatyam102 ▴ 900
0
votes
0
replies
4.2k
views
Comment: Comment: Is the ENSEMBL FTP down?
3.0 years ago by rohitsatyam102 ▴ 900
228 results • Page 2 of 5
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