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3
votes
5
replies
8.5k
views
Creating assembly graphs .gfa
assembly gfa graph bandage visualization
updated 21 months ago by ▴ 40 • written 5.8 years ago by ▴ 80
0
votes
0
replies
6.0k
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Comment: C: how to get database of plants in FASTA format from uniprot
4.7 years ago by ricardoguerreiro2121 ▴ 80
0
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0
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3.7k
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Comment: C: Mapping (minimap2) nanopore reads to parent species to confirm hybridization
4.8 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
8.2k
views
Comment: C: MAKER annotation post processing (AED score)
5.1 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
8.6k
views
Answer: A: Principle Component Analysis (PCA) for GWAS (SNP genotype data)
5.1 years ago by ricardoguerreiro2121 ▴ 80
1
vote
2
replies
3.7k
views
Mapping (minimap2) nanopore reads to parent species to confirm hybridization
hybrids long reads parents minimap2
5.5 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
2.3k
views
Comment: C: Multiple mapping with longreads - Get primary mapping
5.7 years ago by ricardoguerreiro2121 ▴ 80
1
vote
2
replies
2.3k
views
Multiple mapping with longreads - Get primary mapping
mapping minimap2 long reads pacbio samtools
updated 5.7 years ago by 48k • written 5.7 years ago by ▴ 80
0
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0
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8.5k
views
Comment: C: Creating assembly graphs .gfa
5.7 years ago by ricardoguerreiro2121 ▴ 80
0
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0
replies
63k
views
Comment: C: What are chimeric reads?
5.8 years ago by ricardoguerreiro2121 ▴ 80
0
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0
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5.9k
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Comment: C: Reference-guided assembly from short reads
5.8 years ago by ricardoguerreiro2121 ▴ 80
0
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1
reply
6.0k
views
Comment: C: Trimming out primer sequences in the middle of reads
5.8 years ago by ricardoguerreiro2121 ▴ 80
3
votes
2
replies
1.6k
views
Extracting homologous proteins from genome ( blat or exonerate)
blat genome proteins phylogeny exonerate
5.8 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
1.6k
views
Answer: A: Extracting homologous proteins from genome ( blat or exonerate)
5.8 years ago by ricardoguerreiro2121 ▴ 80
3
votes
1
reply
1.3k
views
Is Genome heterozygosity a problem for gene annotation?
heterozygosity diploid genome gene annotation
updated 5.8 years ago by 16k • written 5.8 years ago by ▴ 80
0
votes
1
reply
10k
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Comment: C: gene set filter/selection for training ab initio annotation tools
5.8 years ago by ricardoguerreiro2121 ▴ 80
2
votes
0
replies
10k
views
Comment: C: gene set filter/selection for training ab initio annotation tools
5.9 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
14k
views
Comment: C: Create de novo repeat library
5.9 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
6.0k
views
Answer: A: how to get database of plants in FASTA format from uniprot
6.0 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
1.8k
views
HMMER esl-fetch corrupt coords
HHMER ESL
6.1 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.4k
views
Answer: A: Alternatives to RepeatModeler / nseg install fail
6.2 years ago by ricardoguerreiro2121 ▴ 80
1
vote
1
reply
2.8k
views
Maker (Gene annotation) RepeatMasker error
maker gene annotation repeatmasker
6.2 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.1k
views
Answer: A: pacbio-illumina hybrid assemblies
6.4 years ago by ricardoguerreiro2121 ▴ 80
5
votes
9
replies
3.7k
views
Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
VariantAnnotation bioconductor vcf
6.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.7k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
3.7k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
3.7k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
3.7k
views
Comment: C: Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
6.7 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
2.5k
views
Comment: C: Sequence identity between sequences with different lengths
6.8 years ago by ricardoguerreiro2121 ▴ 80
6
votes
5
replies
2.5k
views
Sequence identity between sequences with different lengths
sequence identity alignment filter mummer
updated 6.8 years ago by 6.5k • written 6.8 years ago by ▴ 80
0
votes
0
replies
4.2k
views
Comment: C: Pysam VariantFile.fetch() without specifying contig
6.8 years ago by ricardoguerreiro2121 ▴ 80
4
votes
2
replies
4.2k
views
Pysam VariantFile.fetch() without specifying contig
pysam python vcf
6.8 years ago by ricardoguerreiro2121 ▴ 80
0
votes
0
replies
13k
views
Comment: C: Capping coverage in bam file
7.0 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
13k
views
Comment: C: Capping coverage in bam file
7.0 years ago by ricardoguerreiro2121 ▴ 80
0
votes
1
reply
13k
views
Comment: C: Capping coverage in bam file
7.0 years ago by ricardoguerreiro2121 ▴ 80
35 results • Page 1 of 1
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