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6.7k
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Comment:
Comment: Merge two bigwig(+/- strand) files from RNA-seq
3 months ago by
rls_08
▴ 40
0
votes
0
replies
309
views
PANTHER functional classification
PANTHER
Gene-Ontology
updated 4 months ago by
Ram
43k • written 4 months ago by
rls_08
▴ 40
0
votes
1
reply
700
views
Comment:
Comment: Calling large domains of signal enrichment (broad peaks) from log2,input normali
6 months ago by
rls_08
▴ 40
0
votes
3
replies
700
views
Calling large domains of signal enrichment (broad peaks) from log2,input normalized ChIP-seq data
chip-seq
peak-caller
normalization
broad-domains
updated 6 months ago by
rfran010
▴ 900 • written 6 months ago by
rls_08
▴ 40
0
votes
1
reply
663
views
Reducing the size of raw sequencing data in fastq format by using a simplified quality score
fastq
compression
updated 10 months ago by
ATpoint
81k • written 10 months ago by
rls_08
▴ 40
0
votes
0
replies
308
views
Getting an "double free or corruption (out)" error when running wigToBigWig
wigToBigwig
12 months ago by
rls_08
▴ 40
0
votes
0
replies
372
views
Any straightforward way to re-bin a bigWig file?
bigwig
12 months ago by
rls_08
▴ 40
0
votes
0
replies
8.9k
views
Comment:
Comment: smoothing or binning bigWig file
12 months ago by
rls_08
▴ 40
1
vote
2
replies
504
views
in an RNA-seq experiment, what threshold would you use to define a set of expressed or active genes in a cell line?
RNA-seq
updated 12 months ago by
i.sudbery
18k • written 12 months ago by
rls_08
▴ 40
0
votes
0
replies
266
views
displaying results of different RNA-seq projects in R shiny
RNA-seq
shiny
R
12 months ago by
rls_08
▴ 40
1
vote
0
replies
8.9k
views
Comment:
C: smoothing or binning bigWig file
3.4 years ago by
rls_08
▴ 40
0
votes
0
replies
8.3k
views
Comment:
C: how to merge overlapping intervals in a bedgraph file
4.1 years ago by
rls_08
▴ 40
1
vote
0
replies
1.3k
views
obtaining mean contact/interaction frequency of a given 2D genomic region (loops from from bedpe file) from a hic matrix
HiC
Hi-C
Bedpe
matrix
R
4.3 years ago by
rls_08
▴ 40
0
votes
1
reply
2.8k
views
Comment:
A: [ChIP-seq. signal plot] How to align the based line of different samples?
4.5 years ago by
rls_08
▴ 40
0
votes
1
reply
17k
views
Comment:
C: STAR align multiple files
4.9 years ago by
rls_08
▴ 40
0
votes
0
replies
2.1k
views
Comment:
C: What variant callers are faster than samtools?
5.1 years ago by
rls_08
▴ 40
2
votes
2
replies
4.5k
views
Answer:
A: install Primer3 on Ubuntu
5.2 years ago by
rls_08
▴ 40
0
votes
1
reply
4.5k
views
Comment:
A: install Primer3 on Ubuntu
5.2 years ago by
rls_08
▴ 40
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