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0
votes
5
replies
834
views
How to generate paired-end FASTQ files from a reference sequence?
MAQ
updated 2.1 years ago by 142k • written 2.1 years ago by ▴ 70
0
votes
0
replies
333
views
How do I add annotation information to ped file and run on PLINK?
plink r bed snps dplyr
2.2 years ago by melissachua90 ▴ 70
0
votes
0
replies
656
views
Plink: No phenotypes present
PLINK r SNPS
2.2 years ago by melissachua90 ▴ 70
0
votes
0
replies
442
views
Plink: How do I run an association analysis?
snps Plink
2.2 years ago by melissachua90 ▴ 70
0
votes
0
replies
475
views
How many samples are wild-type versus mutant with respect to the most significantly enriched gene?
maftools mutation r
updated 11 months ago by 43k • written 2.2 years ago by ▴ 70
0
votes
6
replies
1.8k
views
R: data.table::fread error when converting MAF files to data table
data.table maftools bioconductor fread
2.2 years ago by melissachua90 ▴ 70
0
votes
0
replies
412
views
How do I find the most common mutations in a MAF dataset?
maftools maf mutation
updated 11 months ago by 43k • written 2.2 years ago by ▴ 70
1
vote
3
replies
669
views
How do I download annotated cancer image datasets?
image dataset annotation
updated 2.2 years ago by 142k • written 2.2 years ago by ▴ 70
0
votes
0
replies
308
views
Can I perform pseudo-time analysis using Slingshot without determining the endpoint?
slingshot r pseudotime
updated 2.2 years ago by 82k • written 2.2 years ago by ▴ 70
2
votes
0
replies
562
views
R: Unable to use analyzeFeatures because argument is not a vector
Bioconductor SGSeq R
updated 17 months ago by 43k • written 2.2 years ago by ▴ 70
0
votes
1
reply
843
views
How do I create a loop for each unique genes to subset the GRanges objects only by the gene?
subsetByOverlaps GenomicRanges GRanges findOverlaps
updated 2.3 years ago by ★ 2.9k • written 2.3 years ago by ▴ 70
0
votes
1
reply
548
views
Access to KEGG database using MySQL
KEGG database mysql
updated 2.3 years ago by 161k • written 2.3 years ago by ▴ 70
5
votes
3
replies
1.3k
views
What questions should I expect at a panel interview for a mid-level Assoc Computational Biologist position?
academia panel interview
updated 2.3 years ago by 13k • written 2.3 years ago by ▴ 70
0
votes
0
replies
462
views
IBD analysis using Plink (interpretation of plink.genome file)
snps IBD Plink
2.3 years ago by melissachua90 ▴ 70
0
votes
2
replies
997
views
How do I use PLINK to filter out SNPs?
PLINK r SNPS
updated 8 months ago by ▴ 10 • written 2.3 years ago by ▴ 70
0
votes
2
replies
2.1k
views
R: argument is of length zero
statistics r
updated 2.3 years ago by 11k • written 2.3 years ago by ▴ 70
0
votes
3
replies
614
views
How do I remove columns of a dataframe based on the values of other dataframes?
r
updated 17 months ago by 43k • written 2.3 years ago by ▴ 70
1
vote
1
reply
439
views
How do I subset a dataframe based on several other dataframes using R?
R affymetrix
updated 15 months ago by 43k • written 2.3 years ago by ▴ 70
0
votes
7
replies
1.1k
views
How do I install APT-MIDAS on linux command line?
affymetrix
updated 2.3 years ago by ▴ 600 • written 2.3 years ago by ▴ 70
0
votes
0
replies
545
views
Discriminant gene analysis
selection genes discriminant machine feature learning r
2.8 years ago by melissachua90 ▴ 70
1
vote
4
replies
1.5k
views
R package for filtering expression data
gene-expression r EMA
updated 2.7 years ago by 43k • written 2.8 years ago by ▴ 70
1
vote
3
replies
1.5k
views
log2 normalization produces NaNs
r
updated 17 months ago by 43k • written 2.9 years ago by ▴ 70
0
votes
1
reply
811
views
How do I add a GENSCAN track to the Ensembl Gene Summary
Ensembl genscan
updated 3.2 years ago by 23k • written 3.2 years ago by ▴ 70
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