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560
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How to highlight specific portion of the gene and its isoform using ggbio
ggbio
isoform
r
22 months ago by
camillab.
▴ 160
0
votes
0
replies
2.2k
views
Comment:
Comment: Error getting the genome on clinvaR
22 months ago by
camillab.
▴ 160
0
votes
1
reply
2.2k
views
Comment:
Comment: Error getting the genome on clinvaR
22 months ago by
camillab.
▴ 160
0
votes
1
reply
2.2k
views
Comment:
Comment: Error getting the genome on clinvaR
22 months ago by
camillab.
▴ 160
0
votes
1
reply
2.2k
views
Comment:
Comment: Error getting the genome on clinvaR
22 months ago by
camillab.
▴ 160
0
votes
0
replies
2.2k
views
Comment:
Comment: Error getting the genome on clinvaR
22 months ago by
camillab.
▴ 160
1
vote
10
replies
2.2k
views
Error getting the genome on clinvaR
genome
r
clinvaR
22 months ago by
camillab.
▴ 160
1
vote
2
replies
1.1k
views
How to identify the nearest gene associated with a specific SNPs?
RSID
GWAS
updated 23 months ago by
Jeremy
▴ 930 • written 23 months ago by
camillab.
▴ 160
2
votes
4
replies
2.8k
views
How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a specific way
R
FeaturePlot
Umap
Seurat
updated 2.0 years ago by
LauferVA
4.8k • written 2.0 years ago by
camillab.
▴ 160
0
votes
0
replies
2.8k
views
Comment:
Comment: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
2.0 years ago by
camillab.
▴ 160
0
votes
0
replies
3.6k
views
Comment:
Comment: How to remove the default title to a DimPlot() splitted into two by group.by ?
2.0 years ago by
camillab.
▴ 160
2
votes
2
replies
3.6k
views
How to remove the default title to a DimPlot() splitted into two by group.by ?
Dimplot
title
Seurat
2.0 years ago by
camillab.
▴ 160
0
votes
0
replies
5.7k
views
Comment:
Comment: Seurat changing order cluster shown in the violin plot
2.1 years ago by
camillab.
▴ 160
1
vote
2
replies
5.7k
views
Seurat changing order cluster shown in the violin plot
R
violin
Seurat
2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
2.1k
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
2.1k
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
2.1k
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
2.1 years ago by
camillab.
▴ 160
3
votes
6
replies
2.1k
views
Exporting DEGs obtained from DESeq2
R
Deseq2
updated 2.1 years ago by
Ram
45k • written 2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
1.9k
views
Comment:
Comment: identify DEGs across all conditions and per specific conditions
2.1 years ago by
camillab.
▴ 160
4
votes
6
replies
1.9k
views
identify DEGs across all conditions and per specific conditions
R
DEseq2
updated 2.1 years ago by
Yogi
▴ 70 • written 2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
1.6k
views
Comment:
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
41k
views
Comment:
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
69k
views
Comment:
Comment: Calculating TPM from featureCounts output
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
1.6k
views
Comment:
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
2.1 years ago by
camillab.
▴ 160
1
vote
5
replies
1.6k
views
CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
R
Picard
CollectRnaSeqMetrics
updated 2.1 years ago by
Ram
45k • written 2.1 years ago by
camillab.
▴ 160
1
vote
1
reply
41k
views
Comment:
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
1.9k
views
Comment:
Comment: identify DEGs across all conditions and per specific conditions
2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
3.1k
views
Comment:
Comment: Integrated Seurat object change name of the two conditions
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
3.1k
views
Comment:
Comment: Integrated Seurat object change name of the two conditions
2.1 years ago by
camillab.
▴ 160
2
votes
4
replies
3.1k
views
Integrated Seurat object change name of the two conditions
R
integrated
Seurat
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
2.1k
views
Comment:
Comment: Salmon index not progressing
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
2.1k
views
Comment:
Comment: Salmon index not progressing
2.1 years ago by
camillab.
▴ 160
5
votes
7
replies
2.1k
views
Salmon index not progressing
salmon
updated 2.1 years ago by
Michael
56k • written 2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
2.7k
views
Comment:
Comment: STAR index not working
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
2.7k
views
Comment:
Comment: STAR index not working
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
2.7k
views
Comment:
Comment: STAR index not working
2.1 years ago by
camillab.
▴ 160
0
votes
2
replies
2.7k
views
Comment:
Comment: STAR index not working
2.1 years ago by
camillab.
▴ 160
3
votes
10
replies
2.7k
views
STAR index not working
STAR
RNA-Seq
2.1 years ago by
camillab.
▴ 160
0
votes
0
replies
1.4k
views
Comment:
Comment: Fastqc loop
2.1 years ago by
camillab.
▴ 160
1
vote
3
replies
1.4k
views
Fastqc loop
fastQC
r
RNA-seq
2.1 years ago by
camillab.
▴ 160
0
votes
1
reply
1.3k
views
Comment:
Comment: Theoretical question about scRNA-seq
2.2 years ago by
camillab.
▴ 160
1
vote
3
replies
1.3k
views
Theoretical question about scRNA-seq
R
scRNA-seq
updated 2.2 years ago by
dsull
★ 7.8k • written 2.2 years ago by
camillab.
▴ 160
0
votes
0
replies
1.2k
views
Comment:
Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
2.2 years ago by
camillab.
▴ 160
1
vote
2
replies
1.2k
views
How ti identify genes per terms in with topGO for scRNAseq dataset
scRNAseq
r
GSEA
topGO
2.2 years ago by
camillab.
▴ 160
0
votes
0
replies
73k
views
Comment:
Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
2.3 years ago by
camillab.
▴ 160
0
votes
1
reply
73k
views
Comment:
Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
2.3 years ago by
camillab.
▴ 160
0
votes
0
replies
676
views
Enrichment analysis on scRNSseq on which genes/clusters perform ReactomeGSA and GSEA?
ReactomeGSA
r
integration
scRNAseq
GSA
2.3 years ago by
camillab.
▴ 160
2
votes
1
reply
1.5k
views
How to specify which resolution I want to be plotted in the UMAP?
resolution
scRNSeq
harmony
R
map
updated 2.3 years ago by
Basti
★ 2.1k • written 2.3 years ago by
camillab.
▴ 160
0
votes
1
reply
3.9k
views
Comment:
Comment: Leiden algorithm not working R studio scRNAseq
2.3 years ago by
camillab.
▴ 160
3
votes
3
replies
3.9k
views
Leiden algorithm not working R studio scRNAseq
scRNAseq
R
leidenAlg
reticulate
updated 2.3 years ago by
jared.andrews07
★ 19k • written 2.3 years ago by
camillab.
▴ 160
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