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How to highlight specific portion of the gene and its isoform using ggbio
ggbio isoform r
17 months ago by camillab. ▴ 160
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Comment: Comment: Error getting the genome on clinvaR
17 months ago by camillab. ▴ 160
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1.9k
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Comment: Comment: Error getting the genome on clinvaR
17 months ago by camillab. ▴ 160
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1.9k
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Comment: Comment: Error getting the genome on clinvaR
17 months ago by camillab. ▴ 160
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1.9k
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Comment: Comment: Error getting the genome on clinvaR
17 months ago by camillab. ▴ 160
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1.9k
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Comment: Comment: Error getting the genome on clinvaR
17 months ago by camillab. ▴ 160
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10
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1.9k
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Error getting the genome on clinvaR
genome r clinvaR
17 months ago by camillab. ▴ 160
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2
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893
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How to identify the nearest gene associated with a specific SNPs?
RSID GWAS
updated 19 months ago by ▴ 930 • written 19 months ago by ▴ 160
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4
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2.3k
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How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a specific way
R FeaturePlot Umap Seurat
updated 19 months ago by 4.7k • written 19 months ago by ▴ 160
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Comment: Comment: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
19 months ago by camillab. ▴ 160
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2.9k
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Comment: Comment: How to remove the default title to a DimPlot() splitted into two by group.by ?
20 months ago by camillab. ▴ 160
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2
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2.9k
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How to remove the default title to a DimPlot() splitted into two by group.by ?
Dimplot title Seurat
20 months ago by camillab. ▴ 160
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4.8k
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Comment: Comment: Seurat changing order cluster shown in the violin plot
20 months ago by camillab. ▴ 160
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2
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4.8k
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Seurat changing order cluster shown in the violin plot
R violin Seurat
20 months ago by camillab. ▴ 160
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1.7k
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Comment: Comment: Exporting DEGs obtained from DESeq2
20 months ago by camillab. ▴ 160
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1.7k
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Comment: Comment: Exporting DEGs obtained from DESeq2
20 months ago by camillab. ▴ 160
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1.7k
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Comment: Comment: Exporting DEGs obtained from DESeq2
20 months ago by camillab. ▴ 160
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6
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1.7k
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Exporting DEGs obtained from DESeq2
R Deseq2
updated 20 months ago by 45k • written 20 months ago by ▴ 160
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1.6k
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Comment: Comment: identify DEGs across all conditions and per specific conditions
20 months ago by camillab. ▴ 160
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6
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1.6k
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identify DEGs across all conditions and per specific conditions
R DEseq2
updated 20 months ago by ▴ 70 • written 20 months ago by ▴ 160
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1
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1.3k
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
20 months ago by camillab. ▴ 160
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1
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39k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
20 months ago by camillab. ▴ 160
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66k
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Comment: Comment: Calculating TPM from featureCounts output
20 months ago by camillab. ▴ 160
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1
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1.3k
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
20 months ago by camillab. ▴ 160
1
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5
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1.3k
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CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
R Picard CollectRnaSeqMetrics
updated 20 months ago by 45k • written 20 months ago by ▴ 160
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1
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39k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
20 months ago by camillab. ▴ 160
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1
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1.6k
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Comment: Comment: identify DEGs across all conditions and per specific conditions
20 months ago by camillab. ▴ 160
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2.7k
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Comment: Comment: Integrated Seurat object change name of the two conditions
20 months ago by camillab. ▴ 160
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1
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2.7k
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Comment: Comment: Integrated Seurat object change name of the two conditions
20 months ago by camillab. ▴ 160
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4
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2.7k
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Integrated Seurat object change name of the two conditions
R integrated Seurat
20 months ago by camillab. ▴ 160
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1
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1.8k
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Comment: Comment: Salmon index not progressing
21 months ago by camillab. ▴ 160
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1
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1.8k
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Comment: Comment: Salmon index not progressing
21 months ago by camillab. ▴ 160
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7
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1.8k
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Salmon index not progressing
salmon
updated 21 months ago by 55k • written 21 months ago by ▴ 160
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2.2k
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Comment: Comment: STAR index not working
21 months ago by camillab. ▴ 160
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1
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2.2k
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Comment: Comment: STAR index not working
21 months ago by camillab. ▴ 160
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2.2k
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Comment: Comment: STAR index not working
21 months ago by camillab. ▴ 160
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2
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2.2k
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Comment: Comment: STAR index not working
21 months ago by camillab. ▴ 160
3
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10
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2.2k
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STAR index not working
STAR RNA-Seq
21 months ago by camillab. ▴ 160
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1.1k
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Comment: Comment: Fastqc loop
21 months ago by camillab. ▴ 160
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3
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1.1k
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Fastqc loop
fastQC r RNA-seq
21 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Theoretical question about scRNA-seq
22 months ago by camillab. ▴ 160
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3
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1.0k
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Theoretical question about scRNA-seq
R scRNA-seq
updated 22 months ago by ★ 7.6k • written 22 months ago by ▴ 160
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1.1k
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Comment: Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
22 months ago by camillab. ▴ 160
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2
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1.1k
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How ti identify genes per terms in with topGO for scRNAseq dataset
scRNAseq r GSEA topGO
22 months ago by camillab. ▴ 160
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69k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
22 months ago by camillab. ▴ 160
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69k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
22 months ago by camillab. ▴ 160
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580
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Enrichment analysis on scRNSseq on which genes/clusters perform ReactomeGSA and GSEA?
ReactomeGSA r integration scRNAseq GSA
23 months ago by camillab. ▴ 160
2
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1
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1.3k
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How to specify which resolution I want to be plotted in the UMAP?
resolution scRNSeq harmony R map
updated 23 months ago by ★ 2.1k • written 23 months ago by ▴ 160
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1
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3.4k
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Comment: Comment: Leiden algorithm not working R studio scRNAseq
23 months ago by camillab. ▴ 160
3
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3
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3.4k
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Leiden algorithm not working R studio scRNAseq
scRNAseq R leidenAlg reticulate
updated 23 months ago by ★ 19k • written 23 months ago by ▴ 160
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