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233
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How to highlight specific portion of the gene and its isoform using ggbio
ggbio
isoform
r
3 months ago by
camillab.
▴ 160
0
votes
0
replies
962
views
Comment:
Comment: Error getting the genome on clinvaR
3 months ago by
camillab.
▴ 160
0
votes
1
reply
962
views
Comment:
Comment: Error getting the genome on clinvaR
3 months ago by
camillab.
▴ 160
0
votes
1
reply
962
views
Comment:
Comment: Error getting the genome on clinvaR
3 months ago by
camillab.
▴ 160
0
votes
1
reply
962
views
Comment:
Comment: Error getting the genome on clinvaR
4 months ago by
camillab.
▴ 160
0
votes
0
replies
962
views
Comment:
Comment: Error getting the genome on clinvaR
4 months ago by
camillab.
▴ 160
1
vote
10
replies
962
views
Error getting the genome on clinvaR
genome
r
clinvaR
3 months ago by
camillab.
▴ 160
1
vote
2
replies
415
views
How to identify the nearest gene associated with a specific SNPs?
RSID
GWAS
updated 5 months ago by
Jeremy
▴ 910 • written 5 months ago by
camillab.
▴ 160
2
votes
4
replies
877
views
How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a specific way
R
FeaturePlot
Umap
Seurat
updated 6 months ago by
LauferVA
4.2k • written 6 months ago by
camillab.
▴ 160
0
votes
0
replies
877
views
Comment:
Comment: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
6 months ago by
camillab.
▴ 160
0
votes
0
replies
943
views
Comment:
Comment: How to remove the default title to a DimPlot() splitted into two by group.by ?
6 months ago by
camillab.
▴ 160
1
vote
2
replies
943
views
How to remove the default title to a DimPlot() splitted into two by group.by ?
Dimplot
title
Seurat
6 months ago by
camillab.
▴ 160
0
votes
0
replies
1.4k
views
Comment:
Comment: Seurat changing order cluster shown in the violin plot
6 months ago by
camillab.
▴ 160
1
vote
2
replies
1.4k
views
Seurat changing order cluster shown in the violin plot
R
violin
Seurat
6 months ago by
camillab.
▴ 160
0
votes
0
replies
788
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
7 months ago by
camillab.
▴ 160
0
votes
1
reply
788
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
7 months ago by
camillab.
▴ 160
0
votes
0
replies
788
views
Comment:
Comment: Exporting DEGs obtained from DESeq2
7 months ago by
camillab.
▴ 160
3
votes
6
replies
788
views
Exporting DEGs obtained from DESeq2
R
Deseq2
updated 7 months ago by
Ram
43k • written 7 months ago by
camillab.
▴ 160
0
votes
0
replies
843
views
Comment:
Comment: identify DEGs across all conditions and per specific conditions
7 months ago by
camillab.
▴ 160
4
votes
6
replies
843
views
identify DEGs across all conditions and per specific conditions
R
DEseq2
updated 7 months ago by
Yogi
▴ 70 • written 7 months ago by
camillab.
▴ 160
0
votes
1
reply
738
views
Comment:
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
7 months ago by
camillab.
▴ 160
0
votes
1
reply
33k
views
Comment:
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
7 months ago by
camillab.
▴ 160
0
votes
0
replies
57k
views
Comment:
Comment: Calculating TPM from featureCounts output
7 months ago by
camillab.
▴ 160
0
votes
1
reply
738
views
Comment:
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
7 months ago by
camillab.
▴ 160
1
vote
5
replies
738
views
CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
R
Picard
CollectRnaSeqMetrics
updated 7 months ago by
Ram
43k • written 7 months ago by
camillab.
▴ 160
1
vote
1
reply
33k
views
Comment:
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
7 months ago by
camillab.
▴ 160
0
votes
1
reply
843
views
Comment:
Comment: identify DEGs across all conditions and per specific conditions
7 months ago by
camillab.
▴ 160
0
votes
0
replies
1.1k
views
Comment:
Comment: Integrated Seurat object change name of the two conditions
7 months ago by
camillab.
▴ 160
0
votes
1
reply
1.1k
views
Comment:
Comment: Integrated Seurat object change name of the two conditions
7 months ago by
camillab.
▴ 160
2
votes
4
replies
1.1k
views
Integrated Seurat object change name of the two conditions
R
integrated
Seurat
7 months ago by
camillab.
▴ 160
0
votes
1
reply
956
views
Comment:
Comment: Salmon index not progressing
7 months ago by
camillab.
▴ 160
0
votes
1
reply
956
views
Comment:
Comment: Salmon index not progressing
7 months ago by
camillab.
▴ 160
5
votes
7
replies
956
views
Salmon index not progressing
salmon
updated 7 months ago by
Michael
54k • written 7 months ago by
camillab.
▴ 160
0
votes
0
replies
1.2k
views
Comment:
Comment: STAR index not working
7 months ago by
camillab.
▴ 160
0
votes
1
reply
1.2k
views
Comment:
Comment: STAR index not working
7 months ago by
camillab.
▴ 160
0
votes
1
reply
1.2k
views
Comment:
Comment: STAR index not working
7 months ago by
camillab.
▴ 160
0
votes
2
replies
1.2k
views
Comment:
Comment: STAR index not working
7 months ago by
camillab.
▴ 160
3
votes
10
replies
1.2k
views
STAR index not working
STAR
RNA-Seq
7 months ago by
camillab.
▴ 160
0
votes
0
replies
600
views
Comment:
Comment: Fastqc loop
7 months ago by
camillab.
▴ 160
1
vote
3
replies
600
views
Fastqc loop
fastQC
r
RNA-seq
7 months ago by
camillab.
▴ 160
0
votes
1
reply
601
views
Comment:
Comment: Theoretical question about scRNA-seq
8 months ago by
camillab.
▴ 160
1
vote
3
replies
601
views
Theoretical question about scRNA-seq
R
scRNA-seq
updated 8 months ago by
dsull
★ 5.9k • written 8 months ago by
camillab.
▴ 160
0
votes
0
replies
557
views
Comment:
Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
8 months ago by
camillab.
▴ 160
1
vote
2
replies
557
views
How ti identify genes per terms in with topGO for scRNAseq dataset
scRNAseq
r
GSEA
topGO
8 months ago by
camillab.
▴ 160
0
votes
0
replies
58k
views
Comment:
Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
9 months ago by
camillab.
▴ 160
0
votes
1
reply
58k
views
Comment:
Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
9 months ago by
camillab.
▴ 160
0
votes
0
replies
339
views
Enrichment analysis on scRNSseq on which genes/clusters perform ReactomeGSA and GSEA?
ReactomeGSA
r
integration
scRNAseq
GSA
9 months ago by
camillab.
▴ 160
2
votes
1
reply
812
views
How to specify which resolution I want to be plotted in the UMAP?
resolution
scRNSeq
harmony
R
map
updated 9 months ago by
Basti
★ 2.0k • written 9 months ago by
camillab.
▴ 160
0
votes
1
reply
1.5k
views
Comment:
Comment: Leiden algorithm not working R studio scRNAseq
9 months ago by
camillab.
▴ 160
3
votes
3
replies
1.5k
views
Leiden algorithm not working R studio scRNAseq
scRNAseq
R
leidenAlg
reticulate
updated 9 months ago by
jared.andrews07
★ 16k • written 9 months ago by
camillab.
▴ 160
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