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How to highlight specific portion of the gene and its isoform using ggbio
ggbio isoform r
12 months ago by camillab. ▴ 160
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Comment: Comment: Error getting the genome on clinvaR
12 months ago by camillab. ▴ 160
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1.4k
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Comment: Comment: Error getting the genome on clinvaR
12 months ago by camillab. ▴ 160
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1.4k
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Comment: Comment: Error getting the genome on clinvaR
12 months ago by camillab. ▴ 160
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1.4k
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Comment: Comment: Error getting the genome on clinvaR
12 months ago by camillab. ▴ 160
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1.4k
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Comment: Comment: Error getting the genome on clinvaR
12 months ago by camillab. ▴ 160
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10
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1.4k
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Error getting the genome on clinvaR
genome r clinvaR
12 months ago by camillab. ▴ 160
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2
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698
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How to identify the nearest gene associated with a specific SNPs?
RSID GWAS
updated 14 months ago by ▴ 930 • written 14 months ago by ▴ 160
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4
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1.6k
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How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a specific way
R FeaturePlot Umap Seurat
updated 15 months ago by 4.5k • written 15 months ago by ▴ 160
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1.6k
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Comment: Comment: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
15 months ago by camillab. ▴ 160
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2.2k
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Comment: Comment: How to remove the default title to a DimPlot() splitted into two by group.by ?
15 months ago by camillab. ▴ 160
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2
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2.2k
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How to remove the default title to a DimPlot() splitted into two by group.by ?
Dimplot title Seurat
15 months ago by camillab. ▴ 160
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3.4k
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Comment: Comment: Seurat changing order cluster shown in the violin plot
15 months ago by camillab. ▴ 160
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2
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3.4k
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Seurat changing order cluster shown in the violin plot
R violin Seurat
15 months ago by camillab. ▴ 160
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1.2k
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Comment: Comment: Exporting DEGs obtained from DESeq2
15 months ago by camillab. ▴ 160
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1
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1.2k
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Comment: Comment: Exporting DEGs obtained from DESeq2
15 months ago by camillab. ▴ 160
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1.2k
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Comment: Comment: Exporting DEGs obtained from DESeq2
15 months ago by camillab. ▴ 160
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6
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1.2k
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Exporting DEGs obtained from DESeq2
R Deseq2
updated 15 months ago by 44k • written 15 months ago by ▴ 160
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1.2k
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Comment: Comment: identify DEGs across all conditions and per specific conditions
16 months ago by camillab. ▴ 160
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6
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1.2k
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identify DEGs across all conditions and per specific conditions
R DEseq2
updated 15 months ago by ▴ 70 • written 16 months ago by ▴ 160
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1.0k
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
16 months ago by camillab. ▴ 160
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1
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36k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
16 months ago by camillab. ▴ 160
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62k
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Comment: Comment: Calculating TPM from featureCounts output
16 months ago by camillab. ▴ 160
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1
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1.0k
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
16 months ago by camillab. ▴ 160
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5
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1.0k
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CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
R Picard CollectRnaSeqMetrics
updated 16 months ago by 44k • written 16 months ago by ▴ 160
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1
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36k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
16 months ago by camillab. ▴ 160
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1
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1.2k
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Comment: Comment: identify DEGs across all conditions and per specific conditions
16 months ago by camillab. ▴ 160
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2.0k
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Comment: Comment: Integrated Seurat object change name of the two conditions
16 months ago by camillab. ▴ 160
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1
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2.0k
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Comment: Comment: Integrated Seurat object change name of the two conditions
16 months ago by camillab. ▴ 160
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4
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2.0k
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Integrated Seurat object change name of the two conditions
R integrated Seurat
16 months ago by camillab. ▴ 160
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1
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1.4k
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Comment: Comment: Salmon index not progressing
16 months ago by camillab. ▴ 160
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1
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1.4k
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Comment: Comment: Salmon index not progressing
16 months ago by camillab. ▴ 160
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7
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1.4k
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Salmon index not progressing
salmon
updated 16 months ago by 55k • written 16 months ago by ▴ 160
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1.8k
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Comment: Comment: STAR index not working
16 months ago by camillab. ▴ 160
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1
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1.8k
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Comment: Comment: STAR index not working
16 months ago by camillab. ▴ 160
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1.8k
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Comment: Comment: STAR index not working
16 months ago by camillab. ▴ 160
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2
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1.8k
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Comment: Comment: STAR index not working
16 months ago by camillab. ▴ 160
3
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10
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1.8k
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STAR index not working
STAR RNA-Seq
16 months ago by camillab. ▴ 160
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0
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861
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Comment: Comment: Fastqc loop
16 months ago by camillab. ▴ 160
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3
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861
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Fastqc loop
fastQC r RNA-seq
16 months ago by camillab. ▴ 160
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1
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798
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Comment: Comment: Theoretical question about scRNA-seq
17 months ago by camillab. ▴ 160
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3
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798
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Theoretical question about scRNA-seq
R scRNA-seq
updated 17 months ago by ★ 7.2k • written 17 months ago by ▴ 160
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784
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Comment: Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
17 months ago by camillab. ▴ 160
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2
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784
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How ti identify genes per terms in with topGO for scRNAseq dataset
scRNAseq r GSEA topGO
17 months ago by camillab. ▴ 160
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65k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
17 months ago by camillab. ▴ 160
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1
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65k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
17 months ago by camillab. ▴ 160
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467
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Enrichment analysis on scRNSseq on which genes/clusters perform ReactomeGSA and GSEA?
ReactomeGSA r integration scRNAseq GSA
18 months ago by camillab. ▴ 160
2
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1
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1.1k
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How to specify which resolution I want to be plotted in the UMAP?
resolution scRNSeq harmony R map
updated 18 months ago by ★ 2.0k • written 18 months ago by ▴ 160
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1
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2.7k
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Comment: Comment: Leiden algorithm not working R studio scRNAseq
18 months ago by camillab. ▴ 160
3
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3
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2.7k
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Leiden algorithm not working R studio scRNAseq
scRNAseq R leidenAlg reticulate
updated 18 months ago by ★ 18k • written 18 months ago by ▴ 160
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