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How to highlight specific portion of the gene and its isoform using ggbio
ggbio isoform r
4 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Error getting the genome on clinvaR
4 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Error getting the genome on clinvaR
4 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Error getting the genome on clinvaR
4 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Error getting the genome on clinvaR
4 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: Error getting the genome on clinvaR
4 months ago by camillab. ▴ 160
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10
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1.0k
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Error getting the genome on clinvaR
genome r clinvaR
4 months ago by camillab. ▴ 160
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2
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433
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How to identify the nearest gene associated with a specific SNPs?
RSID GWAS
updated 6 months ago by ▴ 910 • written 6 months ago by ▴ 160
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4
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948
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How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a specific way
R FeaturePlot Umap Seurat
updated 6 months ago by 4.2k • written 6 months ago by ▴ 160
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948
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Comment: Comment: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
6 months ago by camillab. ▴ 160
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1.0k
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Comment: Comment: How to remove the default title to a DimPlot() splitted into two by group.by ?
6 months ago by camillab. ▴ 160
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1.0k
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How to remove the default title to a DimPlot() splitted into two by group.by ?
Dimplot title Seurat
6 months ago by camillab. ▴ 160
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1.5k
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Comment: Comment: Seurat changing order cluster shown in the violin plot
7 months ago by camillab. ▴ 160
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2
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1.5k
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Seurat changing order cluster shown in the violin plot
R violin Seurat
7 months ago by camillab. ▴ 160
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831
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Comment: Comment: Exporting DEGs obtained from DESeq2
7 months ago by camillab. ▴ 160
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1
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831
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Comment: Comment: Exporting DEGs obtained from DESeq2
7 months ago by camillab. ▴ 160
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0
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831
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Comment: Comment: Exporting DEGs obtained from DESeq2
7 months ago by camillab. ▴ 160
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6
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831
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Exporting DEGs obtained from DESeq2
R Deseq2
updated 7 months ago by 44k • written 7 months ago by ▴ 160
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875
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Comment: Comment: identify DEGs across all conditions and per specific conditions
7 months ago by camillab. ▴ 160
4
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6
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875
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identify DEGs across all conditions and per specific conditions
R DEseq2
updated 7 months ago by ▴ 70 • written 7 months ago by ▴ 160
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1
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769
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
7 months ago by camillab. ▴ 160
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1
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34k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
7 months ago by camillab. ▴ 160
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0
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57k
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Comment: Comment: Calculating TPM from featureCounts output
7 months ago by camillab. ▴ 160
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1
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769
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Comment: Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
7 months ago by camillab. ▴ 160
1
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5
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769
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CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
R Picard CollectRnaSeqMetrics
updated 7 months ago by 44k • written 7 months ago by ▴ 160
1
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1
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34k
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Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
7 months ago by camillab. ▴ 160
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1
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875
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Comment: Comment: identify DEGs across all conditions and per specific conditions
7 months ago by camillab. ▴ 160
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0
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1.2k
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Comment: Comment: Integrated Seurat object change name of the two conditions
7 months ago by camillab. ▴ 160
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1
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1.2k
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Comment: Comment: Integrated Seurat object change name of the two conditions
7 months ago by camillab. ▴ 160
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4
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1.2k
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Integrated Seurat object change name of the two conditions
R integrated Seurat
7 months ago by camillab. ▴ 160
0
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1
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993
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Comment: Comment: Salmon index not progressing
8 months ago by camillab. ▴ 160
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1
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993
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Comment: Comment: Salmon index not progressing
8 months ago by camillab. ▴ 160
5
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7
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993
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Salmon index not progressing
salmon
updated 8 months ago by 54k • written 8 months ago by ▴ 160
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0
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1.3k
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Comment: Comment: STAR index not working
8 months ago by camillab. ▴ 160
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1
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1.3k
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Comment: Comment: STAR index not working
8 months ago by camillab. ▴ 160
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1
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1.3k
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Comment: Comment: STAR index not working
8 months ago by camillab. ▴ 160
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2
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1.3k
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Comment: Comment: STAR index not working
8 months ago by camillab. ▴ 160
3
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10
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1.3k
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STAR index not working
STAR RNA-Seq
8 months ago by camillab. ▴ 160
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0
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624
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Comment: Comment: Fastqc loop
8 months ago by camillab. ▴ 160
1
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3
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624
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Fastqc loop
fastQC r RNA-seq
8 months ago by camillab. ▴ 160
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1
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613
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Comment: Comment: Theoretical question about scRNA-seq
9 months ago by camillab. ▴ 160
1
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3
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613
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Theoretical question about scRNA-seq
R scRNA-seq
updated 9 months ago by ★ 6.0k • written 9 months ago by ▴ 160
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0
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572
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Comment: Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
9 months ago by camillab. ▴ 160
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2
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572
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How ti identify genes per terms in with topGO for scRNAseq dataset
scRNAseq r GSEA topGO
9 months ago by camillab. ▴ 160
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0
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59k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
9 months ago by camillab. ▴ 160
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1
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59k
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Comment: Comment: FindConservedMarkers vs FindMarkers vs FindAllMarkers Seurat
9 months ago by camillab. ▴ 160
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0
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345
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Enrichment analysis on scRNSseq on which genes/clusters perform ReactomeGSA and GSEA?
ReactomeGSA r integration scRNAseq GSA
10 months ago by camillab. ▴ 160
2
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1
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839
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How to specify which resolution I want to be plotted in the UMAP?
resolution scRNSeq harmony R map
updated 10 months ago by ★ 2.0k • written 10 months ago by ▴ 160
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1
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1.6k
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Comment: Comment: Leiden algorithm not working R studio scRNAseq
10 months ago by camillab. ▴ 160
3
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3
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1.6k
views
Leiden algorithm not working R studio scRNAseq
scRNAseq R leidenAlg reticulate
updated 10 months ago by ★ 17k • written 10 months ago by ▴ 160
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