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Answer: Answer: Clair3 very low F1 INDEL score
18 months ago by yussab ▴ 100
1
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7
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2.3k
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Problem with DRAGEN RNAseq hashtable directory
dragen hashtable llumina RNA-seq
updated 20 months ago by ▴ 530 • written 20 months ago by ▴ 100
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1
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2.3k
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
updated 20 months ago by 154k • written 20 months ago by ▴ 100
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2.3k
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
20 months ago by yussab ▴ 100
0
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2.3k
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
20 months ago by yussab ▴ 100
0
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0
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959
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Answer: Answer: tumor fraction estimation and fragment size plot using sWGS data
23 months ago by yussab ▴ 100
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2.3k
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Comment: Comment: RNA-seq pipeline for degraded RNA
2.6 years ago by yussab ▴ 100
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3.8k
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Comment: Comment: VEP annotated VCF conversion into TSV/Text
2.8 years ago by yussab ▴ 100
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3.8k
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Comment: Comment: VEP annotated VCF conversion into TSV/Text
2.9 years ago by yussab ▴ 100
0
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1
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3.8k
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Answer: Answer: VEP annotated VCF conversion into TSV/Text
updated 2.9 years ago by 3.3k • written 2.9 years ago by ▴ 100
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1.5k
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Comment: Comment: How to select isoform which shows the highest expression within a gene?
3.2 years ago by yussab ▴ 100
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1.5k
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Comment: Comment: How to select isoform which shows the highest expression within a gene?
3.2 years ago by yussab ▴ 100
3
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4
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1.5k
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How to select isoform which shows the highest expression within a gene?
Stringtie Cufflinks STAR RNA-seq isoform
3.2 years ago by yussab ▴ 100
0
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1
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2.3k
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Comment: Comment: RNA-seq pipeline for degraded RNA
3.3 years ago by yussab ▴ 100
0
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0
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1.4k
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Answer: Answer: By what criteria I can filter the somatic variants after annotation?
3.3 years ago by yussab ▴ 100
0
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1
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2.3k
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Comment: Comment: RNA-seq pipeline for degraded RNA
3.3 years ago by yussab ▴ 100
5
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6
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7.1k
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VEP for cancer annotation using COSMIC
COSMIC Cancer VEP
updated 20 months ago by 45k • written 4.7 years ago by ▴ 100
16
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12
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6.5k
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Reproduce Genome in a Bottle analysis from NA12878 fastq?
genome in a bottle NA12878
updated 10 months ago by ▴ 220 • written 5.0 years ago by ▴ 100
1
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1
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3.3k
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Comment: C: Read VEP output from command line in R
4.6 years ago by yussab ▴ 100
2
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4
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3.3k
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Read VEP output from command line in R
vep ensembl R Bash
updated 15 months ago by • 0 • written 4.6 years ago by ▴ 100
0
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0
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7.1k
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Comment: C: VEP for cancer annotation using COSMIC
4.7 years ago by yussab ▴ 100
0
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0
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7.1k
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Comment: C: VEP for cancer annotation using COSMIC
4.7 years ago by yussab ▴ 100
0
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0
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751
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VCF files unannotated files from The Cancer Genome Atlas
tcga vcf
4.7 years ago by yussab ▴ 100
0
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0
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1.0k
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GATK GenomicDBImport missing argument --intervals for Illumina HiSeq Exome??
gatk exome GenomicDBImport illumina
4.9 years ago by yussab ▴ 100
0
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1
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6.5k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
4.9 years ago by yussab ▴ 100
1
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0
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4.5k
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Answer: A: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
8
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14
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4.5k
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There is a convenient way to use not up-to-date packages in R?
R Packages installation
5.0 years ago by yussab ▴ 100
0
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1
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4.5k
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Comment: C: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
0
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1
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4.5k
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Comment: C: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
0
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1
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4.5k
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Comment: C: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
0
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1
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4.5k
views
Comment: C: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
0
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1
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4.5k
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Comment: C: There is a convenient way to use not up-to-date packages in R?
5.0 years ago by yussab ▴ 100
1
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0
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6.2k
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Answer: A: Error in GATK GenomicsDBImport
5.0 years ago by yussab ▴ 100
0
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0
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6.5k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
5.0 years ago by yussab ▴ 100
0
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0
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6.5k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
5.0 years ago by yussab ▴ 100
0
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0
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2.5k
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Comment: C: Does GATK provide datasets to test their pipelines? (Learning purpose)
5.1 years ago by yussab ▴ 100
7
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7
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2.5k
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Does GATK provide datasets to test their pipelines? (Learning purpose)
GATK Data Oncology
updated 5.1 years ago by 154k • written 5.1 years ago by ▴ 100
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