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506
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Answer: Answer: Clair3 very low F1 INDEL score
15 days ago by yussab ▴ 90
1
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7
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689
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Problem with DRAGEN RNAseq hashtable directory
dragen hashtable llumina RNA-seq
updated 3 months ago by ▴ 300 • written 3 months ago by ▴ 90
0
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1
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689
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
updated 3 months ago by 141k • written 3 months ago by ▴ 90
0
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1
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689
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
3 months ago by yussab ▴ 90
0
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1
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689
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
3 months ago by yussab ▴ 90
0
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0
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501
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Answer: Answer: tumor fraction estimation and fragment size plot using sWGS data
5 months ago by yussab ▴ 90
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0
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1.4k
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Comment: Comment: RNA-seq pipeline for degraded RNA
13 months ago by yussab ▴ 90
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0
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2.2k
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Comment: Comment: VEP annotated VCF conversion into TSV/Text
16 months ago by yussab ▴ 90
1
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0
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2.2k
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Comment: Comment: VEP annotated VCF conversion into TSV/Text
17 months ago by yussab ▴ 90
0
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1
reply
2.2k
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Answer: Answer: VEP annotated VCF conversion into TSV/Text
updated 17 months ago by 3.2k • written 17 months ago by ▴ 90
0
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0
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909
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Comment: Comment: How to select isoform which shows the highest expression within a gene?
21 months ago by yussab ▴ 90
0
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0
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909
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Comment: Comment: How to select isoform which shows the highest expression within a gene?
21 months ago by yussab ▴ 90
3
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4
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909
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How to select isoform which shows the highest expression within a gene?
Stringtie Cufflinks STAR RNA-seq isoform
21 months ago by yussab ▴ 90
0
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1
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1.4k
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Comment: Comment: RNA-seq pipeline for degraded RNA
22 months ago by yussab ▴ 90
0
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0
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767
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Answer: Answer: By what criteria I can filter the somatic variants after annotation?
22 months ago by yussab ▴ 90
0
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1
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1.4k
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Comment: Comment: RNA-seq pipeline for degraded RNA
22 months ago by yussab ▴ 90
5
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6
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4.4k
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VEP for cancer annotation using COSMIC
COSMIC Cancer VEP
updated 11 weeks ago by 43k • written 3.2 years ago by ▴ 90
15
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12
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3.6k
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Reproduce Genome in a Bottle analysis from NA12878 fastq?
genome in a bottle NA12878
updated 2.9 years ago by ▴ 240 • written 3.6 years ago by ▴ 90
0
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0
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2.0k
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Comment: C: Read VEP output from command line in R
3.1 years ago by yussab ▴ 90
0
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3
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2.0k
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Read VEP output from command line in R
vep ensembl R Bash
updated 3.1 years ago by ▴ 660 • written 3.1 years ago by ▴ 90
0
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0
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4.4k
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Comment: C: VEP for cancer annotation using COSMIC
3.2 years ago by yussab ▴ 90
0
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0
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4.4k
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Comment: C: VEP for cancer annotation using COSMIC
3.2 years ago by yussab ▴ 90
0
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0
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529
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VCF files unannotated files from The Cancer Genome Atlas
tcga vcf
3.2 years ago by yussab ▴ 90
0
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0
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799
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GATK GenomicDBImport missing argument --intervals for Illumina HiSeq Exome??
gatk exome GenomicDBImport illumina
3.5 years ago by yussab ▴ 90
0
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1
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3.6k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
3.5 years ago by yussab ▴ 90
1
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0
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2.9k
views
Answer: A: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
8
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14
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2.9k
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There is a convenient way to use not up-to-date packages in R?
R Packages installation
3.5 years ago by yussab ▴ 90
0
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1
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2.9k
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Comment: C: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
0
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1
reply
2.9k
views
Comment: C: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
0
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1
reply
2.9k
views
Comment: C: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
0
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1
reply
2.9k
views
Comment: C: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
0
votes
1
reply
2.9k
views
Comment: C: There is a convenient way to use not up-to-date packages in R?
3.5 years ago by yussab ▴ 90
1
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0
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4.7k
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Answer: A: Error in GATK GenomicsDBImport
3.5 years ago by yussab ▴ 90
0
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0
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3.6k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
3.5 years ago by yussab ▴ 90
0
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0
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3.6k
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Comment: C: Reproduce Genome in a Bottle analysis from NA12878 fastq?
3.5 years ago by yussab ▴ 90
0
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0
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1.8k
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Comment: C: Does GATK provide datasets to test their pipelines? (Learning purpose)
3.6 years ago by yussab ▴ 90
7
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7
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1.8k
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Does GATK provide datasets to test their pipelines? (Learning purpose)
GATK Data Oncology
updated 3.6 years ago by 141k • written 3.6 years ago by ▴ 90
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