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Comment: Comment: Porechop output?
8 weeks ago by giulia.trauzzi ▴ 10
0
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0
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758
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Comment: Comment: Porechop output?
8 weeks ago by giulia.trauzzi ▴ 10
5
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9
replies
758
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Porechop output?
porechop Nanopore
updated 8 weeks ago by 141k • written 8 weeks ago by ▴ 10
0
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1
reply
758
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Comment: Comment: Porechop output?
8 weeks ago by giulia.trauzzi ▴ 10
0
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0
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59k
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Comment: Comment: Subsampling Bam File With Samtools
3 months ago by giulia.trauzzi ▴ 10
0
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1
reply
59k
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Comment: Comment: Subsampling Bam File With Samtools
4 months ago by giulia.trauzzi ▴ 10
0
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0
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1.2k
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Comment: Comment: Ipyrad de novo for variant calling
4 months ago by giulia.trauzzi ▴ 10
0
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0
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506
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Comment: Comment: Run metrics of Oxford Nanopore reads and visualisation of alignment
4 months ago by giulia.trauzzi ▴ 10
2
votes
2
replies
506
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Run metrics of Oxford Nanopore reads and visualisation of alignment
Nanopore alignment sequencing
4 months ago by giulia.trauzzi ▴ 10
1
vote
7
replies
4.3k
views
Plink1.9 error -chr not recognised
unix plink
updated 17 months ago by • 0 • written 2.9 years ago by ▴ 10
0
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3
replies
1.2k
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Ipyrad de novo for variant calling
snps
4 months ago by giulia.trauzzi ▴ 10
0
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1
reply
4.3k
views
Comment: Comment: Plink1.9 error -chr not recognised
2.4 years ago by giulia.trauzzi ▴ 10
0
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1
reply
2.1k
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Comment: Comment: Tajima'D and low-density SNP data
2.6 years ago by giulia.trauzzi ▴ 10
1
vote
0
replies
625
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Why does STRUCTURE v2.3.4 (command line) does not work?
STRUCTURE SNPs bash
2.7 years ago by giulia.trauzzi ▴ 10
0
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4
replies
1.3k
views
Genepop for LD testing SNPs dataset
linkage genepop SNPs
updated 2.9 years ago by 11k • written 2.9 years ago by ▴ 10
0
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2
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1.3k
views
Comment: Comment: Genepop for LD testing SNPs dataset
2.9 years ago by giulia.trauzzi ▴ 10
0
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1
reply
4.3k
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Comment: Comment: Plink1.9 error -chr not recognised
2.9 years ago by giulia.trauzzi ▴ 10
0
votes
2
replies
1.7k
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Running STRUCTURE from command line
command STRUCTURE unix
3.0 years ago by giulia.trauzzi ▴ 10
0
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1
reply
8.2k
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Comment: C: Extremely low mapping rates with bowtie2
3.1 years ago by giulia.trauzzi ▴ 10
0
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0
replies
598
views
How many GBS derived reads pass filters after demultiplexing, adapter removal, trimming and filtering?
GBS SNP Stacks Cutadapt
3.1 years ago by giulia.trauzzi ▴ 10
0
votes
0
replies
595
views
Can I use FLEXBAR to detect and remove barcodes out of my short reads without demultiplexing ?
short reads Illumina barcodes removal FLEXBAR
3.2 years ago by giulia.trauzzi ▴ 10
0
votes
1
reply
816
views
Trimming Illumina Seq with TRIMMOMATIC
trimmomatic GBS Illumina
3.2 years ago by giulia.trauzzi ▴ 10
0
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0
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1.1k
views
Comment: C: Merging .fq files per sample using a big loop - BASH?
3.2 years ago by giulia.trauzzi ▴ 10
3
votes
8
replies
1.1k
views
Merging .fq files per sample using a big loop - BASH?
fastq bash genomics
updated 13 months ago by 43k • written 3.2 years ago by ▴ 10
1
vote
2
replies
594
views
Mean sample depth?
depth SNP
3.2 years ago by giulia.trauzzi ▴ 10
0
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0
replies
1.1k
views
Pairwise Fst values derived from different algorithms?
Fst pairwise Fst population genetics statistics
3.3 years ago by giulia.trauzzi ▴ 10
0
votes
0
replies
893
views
csv file format conversion to arp bash command line
bash population-genetics
updated 13 months ago by 43k • written 3.4 years ago by ▴ 10
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