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4
votes
2
replies
2.5k
views
Calculating minor allele frequency for GnomAD VCF file
gnomAD genome
updated 4.1 years ago by ▴ 50 • written 4.8 years ago by ▴ 10
0
votes
0
replies
656
views
Finding mutational burden in TCGA dataset
genome python UTR tcga cancer
4.5 years ago by Jamie Watson ▴ 10
0
votes
0
replies
524
views
Converting VCF file to ms-style output
SNP genome sequence
4.6 years ago by Jamie Watson ▴ 10
0
votes
0
replies
863
views
Calling UTRs in TCGA dataset
TCGA cancer UTR ORF
4.6 years ago by Jamie Watson ▴ 10
0
votes
3
replies
824
views
Extracting positions that are upstream to start site positions
genome
4.6 years ago by Jamie Watson ▴ 10
0
votes
0
replies
1.6k
views
Comment: C: Downloading CADD scores
4.7 years ago by Jamie Watson ▴ 10
2
votes
3
replies
1.4k
views
difference in the content of a tsv and bigwig file
bigwig
4.7 years ago by Jamie Watson ▴ 10
3
votes
4
replies
1.6k
views
Downloading CADD scores
CADD SNP
updated 4.7 years ago by 166k • written 4.7 years ago by ▴ 10
2
votes
1
reply
1.5k
views
Lifting over from Hg37 to Hg38 coordinates doesn't work
liftover genome
updated 4.8 years ago by ▴ 180 • written 4.8 years ago by ▴ 10
0
votes
0
replies
601
views
Counting proportion of promoters with polymorphism in Gnomad dataset
genome
4.8 years ago by Jamie Watson ▴ 10
1
vote
1
reply
1.2k
views
Downloading promoter sequences from UCSC in bed format
genomics gene Assembly
updated 2.3 years ago by 45k • written 4.9 years ago by ▴ 10
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