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3
votes
2
replies
1.1k
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Calculating minor allele frequency for GnomAD VCF file
gnomAD genome
updated 18 months ago by ▴ 30 • written 2.2 years ago by ▴ 10
0
votes
0
replies
332
views
Finding mutational burden in TCGA dataset
genome python UTR tcga cancer
23 months ago by Jamie Watson ▴ 10
0
votes
0
replies
286
views
Converting VCF file to ms-style output
SNP genome sequence
24 months ago by Jamie Watson ▴ 10
0
votes
0
replies
419
views
Calling UTRs in TCGA dataset
TCGA cancer UTR ORF
2.0 years ago by Jamie Watson ▴ 10
0
votes
3
replies
381
views
Extracting positions that are upstream to start site positions
genome
2.0 years ago by Jamie Watson ▴ 10
0
votes
0
replies
691
views
Comment: C: Downloading CADD scores
2.1 years ago by Jamie Watson ▴ 10
2
votes
3
replies
780
views
difference in the content of a tsv and bigwig file
bigwig
2.1 years ago by Jamie Watson ▴ 10
2
votes
4
replies
691
views
Downloading CADD scores
CADD SNP
updated 2.1 years ago by 152k • written 2.1 years ago by ▴ 10
2
votes
1
reply
846
views
Lifting over from Hg37 to Hg38 coordinates doesn't work
liftover genome
updated 2.2 years ago by ▴ 150 • written 2.2 years ago by ▴ 10
0
votes
0
replies
346
views
Counting proportion of promoters with polymorphism in Gnomad dataset
genome
2.2 years ago by Jamie Watson ▴ 10
1
vote
1
reply
663
views
Downloading promoter sequences from UCSC in bed format
bioinformatics genomics Assembly gene
2.3 years ago by Jamie Watson ▴ 10
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