Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
621
views
Comment: Comment: How to plot VDJ clonotyping data in UMAP of Seurat object using Immunarch
9 months ago by Ming Tommy Tang ★ 3.9k
3
votes
0
replies
1.1k
views
Comment: Comment: interpreting results from pathway analysis
9 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.1k
views
Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
9 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
544
views
Comment: Comment: Make rownames more legible in R Heatmap
9 months ago by Ming Tommy Tang ★ 3.9k
2
votes
0
replies
473
views
Tutorial: Understanding Hierarchical Clustering in R, Distance Measures, and Linkage Methods
clustering gene-expression rstats
updated 9 months ago by 43k • written 9 months ago by ★ 3.9k
0
votes
1
reply
852
views
Answer: Answer: scRNA-seq subclustering
9 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
741
views
Comment: Comment: How to interpret RNAseq output?
9 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
570
views
Comment: Comment: change gene id to gene name
9 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.1k
views
Comment: Comment: After R studio update, restrict view of columns in dataframe.
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
950
views
Answer: Answer: clustering changes in complex heatmap everytime
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
1.8k
views
Comment: Comment: SRA-toolkit installation: "fastq-dump not found"
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
1
reply
675
views
Comment: Comment: how to tell if the JackStrawPlot is good
10 months ago by Ming Tommy Tang ★ 3.9k
2
votes
1
reply
1.1k
views
Comment: Comment: After R studio update, restrict view of columns in dataframe.
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
2.5k
views
Comment: Comment: SEACR and MACS2
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.2k
views
Comment: Comment: Is there any way to access gnomAD data from R?
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
1
reply
675
views
Comment: Comment: how to tell if the JackStrawPlot is good
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
454
views
Answer: Answer: ANNOVAR Annotation of multiple VCF files error because of the absence of hg38_gn
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
1.0k
views
Comment: Comment: GSEA documentation
10 months ago by Ming Tommy Tang ★ 3.9k
4
votes
0
replies
773
views
Tutorial: How to do GSEA in R for RNAseq data
gsea RNAseq rstats
10 months ago by Ming Tommy Tang ★ 3.9k
5
votes
1
reply
5.3k
views
Answer: Answer: Convert Human to Mouse Symbols
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
780
views
Comment: Comment: complex heatmap
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
1
reply
1.7k
views
Comment: Comment: How to add VDJ clonotyping data to Seurat object of scRNA-seq
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
1
reply
1.7k
views
Answer: Answer: How to add VDJ clonotyping data to Seurat object of scRNA-seq
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
577
views
Comment: Comment: GSEA vs Functional Annotation
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
664
views
Tutorial: How to read all files into a single dataframe (merge all RNAseq count table)
RNA-seq rstats
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
1
vote
0
replies
399
views
Answer: Answer: How to remove batch effect from TCGA RNA-seq data?
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
1
reply
967
views
Comment: Comment: Annotation of spatial data
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
1.0k
views
Comment: Comment: Seurat: Log fold change and p value when control expression is 0
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
972
views
Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
967
views
Answer: Answer: Annotation of spatial data
10 months ago by Ming Tommy Tang ★ 3.9k
2
votes
1
reply
2.7k
views
Comment: Comment: Merge really large amount of Seurat objects
updated 10 months ago by 141k • written 10 months ago by ★ 3.9k
0
votes
0
replies
832
views
Comment: Comment: complex heatmap with CPM
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
972
views
Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
972
views
Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
878
views
Comment: Comment: How to ask computational biology questions
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
972
views
Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
2
replies
878
views
Tutorial: How to ask computational biology questions
computational-biology
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
0
votes
0
replies
1.5k
views
Comment: Comment: Calculating Average Coverage or Read Depth for a Sequence (WES)
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
1.6k
views
Comment: Comment: bar chart to show a p value of 0
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
684
views
Tutorial: How to pre-process scRNAseq data from fastq to count matrix with two lines of code
unix scRNA-seq single-cell rstats
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
1
vote
0
replies
813
views
Comment: Comment: How to interpret chipseq profile plot
10 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
813
views
Answer: Answer: How to interpret chipseq profile plot
10 months ago by Ming Tommy Tang ★ 3.9k
3
votes
0
replies
737
views
Tutorial: best practices for single-cell RNAseq analysis
cell single scRNAseq
10 months ago by Ming Tommy Tang ★ 3.9k
1
vote
0
replies
607
views
Tutorial: How to make a perfect heatmap using RNAseq data
heatmap RNAseq rstats
10 months ago by Ming Tommy Tang ★ 3.9k
4
votes
0
replies
953
views
Tutorial: How to make a heatmap in R and deep understand it
heatmap r
11 months ago by Ming Tommy Tang ★ 3.9k
0
votes
1
reply
1.9k
views
Comment: Comment: Align miRNA library (small RNA-seq) without trimming
13 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.5k
views
Answer: Answer: Adding median value to VlnPlot in Seurat
13 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.9k
views
Answer: Answer: how to know what adapter sequences to trim for RNA-seq?
13 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
1.4k
views
Answer: Answer: Variant Calling with Multiple Individuals in Freebayes
13 months ago by Ming Tommy Tang ★ 3.9k
0
votes
2
replies
1.7k
views
Answer: Answer: Log2 FC Threshold
13 months ago by Ming Tommy Tang ★ 3.9k
424 results • Page 2 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6