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1
vote
6
replies
4.5k
views
Mouse to Human Protein Alignment Maps
alignment sequence mouse
updated 8 weeks ago by ▴ 20 • written 7.6 years ago by ▴ 600
0
votes
0
replies
259
views
Reference Panel for Copy Number Analysis Based on Clinical Target Capture Sequencing
copynumber target-capture
10 months ago by Noushin N ▴ 600
1
vote
0
replies
2.2k
views
Comment: C: Ensembl REST API Optional Parameters
4.3 years ago by Noushin N ▴ 600
0
votes
0
replies
2.1k
views
Comment: C: Calling CNA from aCGH: Thresholding?
updated 4.3 years ago by 43k • written 8.2 years ago by ▴ 600
6
votes
6
replies
2.2k
views
Ensembl REST API Optional Parameters
ensembl VEP
updated 21 months ago by ★ 2.4k • written 4.3 years ago by ▴ 600
0
votes
0
replies
2.2k
views
Comment: C: Ensembl REST API Optional Parameters
4.3 years ago by Noushin N ▴ 600
0
votes
0
replies
1.1k
views
Comment: C: Rsamtools mpileup discrepancy
4.3 years ago by Noushin N ▴ 600
0
votes
2
replies
1.1k
views
Rsamtools mpileup discrepancy
samtools R
4.3 years ago by Noushin N ▴ 600
0
votes
0
replies
973
views
Comment: C: Annotation with Ensembl REST API
4.4 years ago by Noushin N ▴ 600
0
votes
3
replies
973
views
Annotation with Ensembl REST API
ensembl R API
updated 4.4 years ago by 23k • written 4.4 years ago by ▴ 600
0
votes
0
replies
973
views
Comment: C: Annotation with Ensembl REST API
4.4 years ago by Noushin N ▴ 600
0
votes
1
reply
10k
views
Comment: C: Samtools Index Segmentation Fault
updated 4.5 years ago by 43k • written 10.1 years ago by ▴ 600
0
votes
0
replies
775
views
Intra-tumor Heterogeneity / Mutation Cellular Fraction in TCGA Data
TCGA Heterogeneity
5.3 years ago by Noushin N ▴ 600
0
votes
1
reply
1.6k
views
Array CGH quality control
array-cgh
updated 5.6 years ago by 87k • written 8.2 years ago by ▴ 600
2
votes
0
replies
2.0k
views
Answer: A: Mapability index (track) from UCSC
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 600
1
vote
1
reply
2.9k
views
Answer: A: using vcftools to add gene name to vcf file
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 600
0
votes
0
replies
1.7k
views
Comment: A: How to find patient sample.type in TCGA-PRAD ?
5.8 years ago by Noushin N ▴ 600
1
vote
0
replies
1.9k
views
Answer: A: Inconsistency of allele depth in BAM and VCF
6.0 years ago by Noushin N ▴ 600
0
votes
0
replies
1.4k
views
Comment: C: Why GWASs cannot speculate what kind of mutation the SNP would cause?
6.2 years ago by Noushin N ▴ 600
5
votes
0
replies
1.5k
views
Answer: A: identifying TP53 germline mutations which are also in tumor cells.
6.2 years ago by Noushin N ▴ 600
2
votes
0
replies
1.1k
views
Answer: A: Is it possible to check whether a sample is progeny of the other two samples fro
6.2 years ago by Noushin N ▴ 600
2
votes
1
reply
1.4k
views
Answer: A: Why GWASs cannot speculate what kind of mutation the SNP would cause?
6.2 years ago by Noushin N ▴ 600
1
vote
0
replies
1.7k
views
Answer: A: Changing Chromosome Notation in Bam Files to Include Sample ID
6.2 years ago by Noushin N ▴ 600
1
vote
1
reply
40k
views
Answer: A: Remove columns and rows which have only NAs without deleting all the data
6.8 years ago by Noushin N ▴ 600
0
votes
0
replies
2.3k
views
Answer: A: retrieve genomic coordinate on mRNA
6.8 years ago by Noushin N ▴ 600
0
votes
0
replies
4.3k
views
Comment: C: B Allele Frequency (VAF) Segmentation Analysis
7.1 years ago by Noushin N ▴ 600
1
vote
1
reply
1.8k
views
Comment: C: Where is the BigWig Supplementary Information?
7.2 years ago by Noushin N ▴ 600
0
votes
1
reply
2.2k
views
Comment: C: Understanding coverage command
7.2 years ago by Noushin N ▴ 600
0
votes
0
replies
1.6k
views
Answer: A: is there any R package to measure the efficiency of different exome capture kits
7.3 years ago by Noushin N ▴ 600
0
votes
2
replies
4.6k
views
Comment: C: How to extract FORMAT information (GT, PG, PI, etc) from each SAMPLE in a vcf fi
7.3 years ago by Noushin N ▴ 600
0
votes
1
reply
4.6k
views
Comment: C: How to extract FORMAT information (GT, PG, PI, etc) from each SAMPLE in a vcf fi
7.3 years ago by Noushin N ▴ 600
1
vote
2
replies
4.6k
views
Answer: A: How to extract FORMAT information (GT, PG, PI, etc) from each SAMPLE in a vcf fi
7.3 years ago by Noushin N ▴ 600
2
votes
0
replies
7.2k
views
Answer: A: Benjamin Hochberg adjust P-values
7.4 years ago by Noushin N ▴ 600
1
vote
1
reply
22k
views
Comment: C: Calculating Variant Allele Frequency
7.4 years ago by Noushin N ▴ 600
2
votes
1
reply
22k
views
Comment: C: Calculating Variant Allele Frequency
7.4 years ago by Noushin N ▴ 600
4
votes
1
reply
22k
views
Answer: A: Calculating Variant Allele Frequency
7.4 years ago by Noushin N ▴ 600
0
votes
1
reply
1.9k
views
Answer: A: Does ADTEx use CBS for segmentation?
7.5 years ago by Noushin N ▴ 600
0
votes
1
reply
3.1k
views
Answer: A: What the x-axis of this box plot is measuring?
7.5 years ago by Noushin N ▴ 600
1
vote
1
reply
2.6k
views
Comment: C: how to extract some probes from a file contains duplicated row names
7.5 years ago by Noushin N ▴ 600
1
vote
1
reply
2.6k
views
Answer: A: how to extract some probes from a file contains duplicated row names
7.5 years ago by Noushin N ▴ 600
0
votes
1
reply
4.5k
views
Comment: C: Mouse to Human Protein Alignment Maps
7.6 years ago by Noushin N ▴ 600
3
votes
1
reply
3.4k
views
Answer: A: Extract allele frequencies from VCF
7.6 years ago by Noushin N ▴ 600
1
vote
0
replies
1.6k
views
Comment: C: extract a table a subset from table
7.6 years ago by Noushin N ▴ 600
1
vote
0
replies
1.5k
views
Answer: A: Cancer DNA sequences
7.7 years ago by Noushin N ▴ 600
0
votes
1
reply
3.6k
views
Answer: A: SnpEff html result
7.7 years ago by Noushin N ▴ 600
0
votes
0
replies
1.7k
views
Comment: C: R script/package to plot mutation comparision in cancers
7.7 years ago by Noushin N ▴ 600
2
votes
1
reply
9.1k
views
Answer: A: Allele frequency of vcf file
7.7 years ago by Noushin N ▴ 600
6
votes
10
replies
4.3k
views
Somatic Mutation Phasing
cancer somatic haplotype
updated 7.7 years ago by 12k • written 10.2 years ago by ▴ 600
2
votes
1
reply
5.2k
views
Comment: C: Allele count for SNPs
7.7 years ago by Noushin N ▴ 600
7
votes
8
replies
7.2k
views
Parsing Base String From Samtools Mpileup
samtools mpileup
updated 2.4 years ago by 43k • written 10.8 years ago by ▴ 600
95 results • Page 1 of 2
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