Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
5
votes
2
replies
6.3k
views
Answer: A: GATK4 VariantRecalibrator resource error
4.8 years ago by DareDevil ★ 4.4k
1
vote
1
reply
2.1k
views
Comment: C: How to pipe samtools mileup with varscan trio caller?
4.8 years ago by DareDevil ★ 4.4k
0
votes
0
replies
2.1k
views
Comment: C: How to pipe samtools mileup with varscan trio caller?
4.8 years ago by DareDevil ★ 4.4k
1
vote
2
replies
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.8 years ago by DareDevil ★ 4.4k
2
votes
0
replies
3.1k
views
Comment: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
4.8 years ago by DareDevil ★ 4.4k
10
votes
4
replies
2.1k
views
How to pipe samtools mileup with varscan trio caller?
varscan samtools pipe
4.8 years ago by DareDevil ★ 4.4k
0
votes
0
replies
2.5k
views
Comment: C: Is this a good workflow to find denovo mutations in trios?
4.8 years ago by DareDevil ★ 4.4k
0
votes
1
reply
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.8 years ago by DareDevil ★ 4.4k
0
votes
1
reply
3.1k
views
Comment: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
4.8 years ago by DareDevil ★ 4.4k
1
vote
0
replies
35k
views
Comment: C: Star Or Tophat?
4.8 years ago by DareDevil ★ 4.4k
0
votes
0
replies
1.4k
views
Comment: C: Extracting amino acid positions from a fasta sequence
4.8 years ago by DareDevil ★ 4.4k
1
vote
0
replies
9.1k
views
Comment: C: Scaled gene expression data and produced negative value
4.8 years ago by DareDevil ★ 4.4k
3
votes
0
replies
9.1k
views
Comment: C: Scaled gene expression data and produced negative value
4.8 years ago by DareDevil ★ 4.4k
1
vote
0
replies
2.8k
views
Comment: C: Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
4.8 years ago by DareDevil ★ 4.4k
2
votes
0
replies
2.8k
views
Comment: C: Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
4.8 years ago by DareDevil ★ 4.4k
10
votes
4
replies
2.8k
views
Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
GenomicsDBImport GATK trio cohort
4.8 years ago by DareDevil ★ 4.4k
0
votes
1
reply
1.5k
views
Comment: C: How to call denovo variants from multiple trios cohort?
4.8 years ago by DareDevil ★ 4.4k
0
votes
0
replies
1.5k
views
Comment: C: How to call denovo variants from multiple trios cohort?
4.8 years ago by DareDevil ★ 4.4k
2
votes
4
replies
1.5k
views
How to call denovo variants from multiple trios cohort?
trio denovo gatk germline
updated 4.8 years ago by 166k • written 4.8 years ago by ★ 4.4k
2
votes
0
replies
2.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
4.8 years ago by DareDevil ★ 4.4k
1
vote
0
replies
2.4k
views
Comment: C: Access metadata in GEO expression datasets
4.8 years ago by DareDevil ★ 4.4k
2
votes
0
replies
2.4k
views
Comment: C: Access metadata in GEO expression datasets
4.8 years ago by DareDevil ★ 4.4k
3
votes
0
replies
2.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
4.8 years ago by DareDevil ★ 4.4k
0
votes
1
reply
2.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
4.8 years ago by DareDevil ★ 4.4k
4
votes
0
replies
1.1k
views
How to filter miRNAs from `NanoString nCounter` assay?
NanoString mRNA miRNA nCounter filter
4.8 years ago by DareDevil ★ 4.4k
2
votes
0
replies
1.6k
views
Comment: C: Tumor-Normal Matched Pairwise DE using DEseq2
4.8 years ago by DareDevil ★ 4.4k
2
votes
1
reply
2.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
4.8 years ago by DareDevil ★ 4.4k
2
votes
1
reply
1.6k
views
Comment: C: Tumor-Normal Matched Pairwise DE using DEseq2
4.9 years ago by DareDevil ★ 4.4k
2
votes
1
reply
2.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
4.9 years ago by DareDevil ★ 4.4k
3
votes
1
reply
1.4k
views
Comment: C: Correlation network analysis
4.9 years ago by DareDevil ★ 4.4k
6
votes
1
reply
3.0k
views
Answer: A: different IDs conversion to Gene ID/symbol
4.9 years ago by DareDevil ★ 4.4k
2
votes
0
replies
5.6k
views
Comment: C: Cutoff for TPM value
4.9 years ago by DareDevil ★ 4.4k
3
votes
1
reply
1.4k
views
Comment: C: Correlation network analysis
4.9 years ago by DareDevil ★ 4.4k
2
votes
0
replies
3.7k
views
Comment: C: RNA Seq Analysis in R
4.9 years ago by DareDevil ★ 4.4k
2
votes
1
reply
1.5k
views
Comment: C: About HaplotypeCaller (GATK) and using gatk4-rnaseq-germline-snps-indels workflo
4.9 years ago by DareDevil ★ 4.4k
2
votes
1
reply
1.5k
views
Comment: C: About HaplotypeCaller (GATK) and using gatk4-rnaseq-germline-snps-indels workflo
4.9 years ago by DareDevil ★ 4.4k
0
votes
1
reply
3.0k
views
Comment: C: different IDs conversion to Gene ID/symbol
4.9 years ago by DareDevil ★ 4.4k
0
votes
0
replies
5.4k
views
Comment: C: Adapter trimming tool for Windows?
4.9 years ago by DareDevil ★ 4.4k
2
votes
2
replies
3.7k
views
Comment: C: RNA Seq Analysis in R
4.9 years ago by DareDevil ★ 4.4k
3
votes
1
reply
3.7k
views
Answer: A: RNA Seq Analysis in R
4.9 years ago by DareDevil ★ 4.4k
4
votes
9
replies
1.6k
views
Issues with adapter trimming when there are no adapters?
fastqc cutadapt adapters illumina trimgalore
4.9 years ago by DareDevil ★ 4.4k
0
votes
2
replies
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.9 years ago by DareDevil ★ 4.4k
0
votes
1
reply
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.9 years ago by DareDevil ★ 4.4k
1
vote
1
reply
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.9 years ago by DareDevil ★ 4.4k
0
votes
0
replies
8.0k
views
Answer: A: SIGNATURE MATRIX IN CIBERSORT
4.9 years ago by DareDevil ★ 4.4k
0
votes
1
reply
4.3k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
4.9 years ago by DareDevil ★ 4.4k
16
votes
15
replies
4.3k
views
How to call denovo and rare variants from a trios cohort?
gatk gvcf trio denovo variants
updated 4.9 years ago by 23k • written 4.9 years ago by ★ 4.4k
0
votes
0
replies
2.2k
views
Answer: A: How do I download CRAM/BAM data from EGA using HTSGET
4.9 years ago by DareDevil ★ 4.4k
248 results • Page 5 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6