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4
votes
1
reply
6.0k
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DESeq2 time-series - full model matrix is less than full rank
full-rank design DESeq2 time-series
updated 9 weeks ago by 15k • written 9 weeks ago by ▴ 80
7
votes
6
replies
961
views
6 follow
How do I interpert PCA before differential expression analysis
EDA DESeq2 PCA QC
updated 3 months ago by ★ 30k • written 3 months ago by ▴ 80
1
vote
2
replies
1.0k
views
Running trajectory and velocity analysis with multiple samples
seurat velocity loom trajectory
written 19 months ago by ▴ 80
0
votes
0
replies
484
views
I woudl ike to understnad how to set the aucMaxRank value for my data set
AUCell aucMaxRank
5 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by gogeni5529 ▴ 80
9
votes
10
replies
1.5k
views
STAR vs. Kallisto
STAR kallisto alignment RNA-Seq mapping
updated 6 months ago by ★ 7.8k • written 6 months ago by ▴ 80
0
votes
2
replies
1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by gogeni5529 ▴ 80
3
votes
2
replies
694
views
ggplot of two data set with different colors
geom_line scale_colour_manual ggplot2
updated 8 months ago by ▴ 20 • written 8 months ago by ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
9 months ago by gogeni5529 ▴ 80
7
votes
8
replies
1.7k
views
How well was the rRNA depletion for RNA-Seq experiments
contamination star rrna bbduk ribodetector
updated 9 months ago by 154k • written 9 months ago by ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
9 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.7k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
9 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.8k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
11 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.8k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
11 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.8k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
11 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.8k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
11 months ago by gogeni5529 ▴ 80
4
votes
10
replies
1.8k
views
Batch correction of two RNA-Seq data sets
DESeq2 batch-correction
11 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.8k
views
Answer: Answer: Batch correction of two RNA-Seq data sets
11 months ago by gogeni5529 ▴ 80
2
votes
2
replies
902
views
kb count -x parameter - what are the three parts?
kb_python umi cell-barcodes kallisto
updated 16 months ago by ★ 1.9k • written 16 months ago by ▴ 80
2
votes
4
replies
1.1k
views
indexing the drosophila genome for kallisto
index kallisto
16 months ago by gogeni5529 ▴ 80
1
vote
0
replies
1.1k
views
Answer: Answer: indexing the drosophila genome for kallisto
16 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.1k
views
Comment: Comment: indexing the drosophila genome for kallisto
16 months ago by gogeni5529 ▴ 80
0
votes
0
replies
583
views
Setting the size for finding motifs using homer
motif homer
17 months ago by gogeni5529 ▴ 80
0
votes
0
replies
850
views
Comment: Comment: cluster annotation in single-cell (-nuclei) RNA-Seq or multiome experiments
17 months ago by gogeni5529 ▴ 80
1
vote
2
replies
850
views
cluster annotation in single-cell (-nuclei) RNA-Seq or multiome experiments
celldex annotation singler scRNAseq clustering
17 months ago by gogeni5529 ▴ 80
0
votes
0
replies
3.6k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.6 years ago by gogeni5529 ▴ 80
0
votes
0
replies
3.6k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.6 years ago by gogeni5529 ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.6 years ago by gogeni5529 ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.6 years ago by gogeni5529 ▴ 80
0
votes
0
replies
3.6k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.6 years ago by gogeni5529 ▴ 80
8
votes
10
replies
3.6k
views
How to run STARsolo run over multiple samples like cellranger
cellranger starsolo
updated 2.6 years ago by 13k • written 2.6 years ago by ▴ 80
0
votes
1
reply
1.8k
views
Comment: Comment: Which side do I need to trim when having adapter residues in my reads?
3.8 years ago by gogeni5529 ▴ 80
0
votes
1
reply
1.8k
views
Comment: Comment: Which side do I need to trim when having adapter residues in my reads?
3.8 years ago by gogeni5529 ▴ 80
3
votes
5
replies
1.8k
views
Which side do I need to trim when having adapter residues in my reads?
trimmomatic adapters fastqc cutadapt
updated 3.8 years ago by 154k • written 3.8 years ago by ▴ 80
4
votes
1
reply
2.1k
views
proteomics data analysis and non-normality distribution
limma proteomics
updated 4.1 years ago by ★ 3.1k • written 4.1 years ago by ▴ 80
35 results • Page 1 of 1
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