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4
votes
1
reply
5.8k
views
DESeq2 time-series - full model matrix is less than full rank
full-rank design DESeq2 time-series
updated 17 days ago by 15k • written 17 days ago by ▴ 80
7
votes
6
replies
837
views
6 follow
How do I interpert PCA before differential expression analysis
EDA DESeq2 PCA QC
updated 9 weeks ago by ★ 30k • written 9 weeks ago by ▴ 80
1
vote
2
replies
965
views
Running trajectory and velocity analysis with multiple samples
seurat velocity loom trajectory
written 17 months ago by ▴ 80
0
votes
0
replies
388
views
I woudl ike to understnad how to set the aucMaxRank value for my data set
AUCell aucMaxRank
3 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.3k
views
Comment: Comment: STAR vs. Kallisto
5 months ago by gogeni5529 ▴ 80
9
votes
10
replies
1.3k
views
STAR vs. Kallisto
STAR kallisto alignment RNA-Seq mapping
updated 4 months ago by ★ 7.7k • written 5 months ago by ▴ 80
0
votes
2
replies
1.3k
views
Comment: Comment: STAR vs. Kallisto
5 months ago by gogeni5529 ▴ 80
3
votes
2
replies
573
views
ggplot of two data set with different colors
geom_line scale_colour_manual ggplot2
updated 6 months ago by ▴ 20 • written 6 months ago by ▴ 80
0
votes
1
reply
1.5k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
7 months ago by gogeni5529 ▴ 80
7
votes
8
replies
1.5k
views
How well was the rRNA depletion for RNA-Seq experiments
contamination star rrna bbduk ribodetector
updated 7 months ago by 153k • written 7 months ago by ▴ 80
0
votes
1
reply
1.5k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
7 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.5k
views
Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
7 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.6k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
9 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.6k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
9 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.6k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
9 months ago by gogeni5529 ▴ 80
0
votes
0
replies
1.6k
views
Comment: Comment: Batch correction of two RNA-Seq data sets
9 months ago by gogeni5529 ▴ 80
4
votes
10
replies
1.6k
views
Batch correction of two RNA-Seq data sets
DESeq2 batch-correction
9 months ago by gogeni5529 ▴ 80
0
votes
1
reply
1.6k
views
Answer: Answer: Batch correction of two RNA-Seq data sets
9 months ago by gogeni5529 ▴ 80
2
votes
2
replies
817
views
kb count -x parameter - what are the three parts?
kb_python umi cell-barcodes kallisto
updated 14 months ago by ★ 1.9k • written 14 months ago by ▴ 80
2
votes
4
replies
996
views
indexing the drosophila genome for kallisto
index kallisto
14 months ago by gogeni5529 ▴ 80
1
vote
0
replies
996
views
Answer: Answer: indexing the drosophila genome for kallisto
14 months ago by gogeni5529 ▴ 80
0
votes
1
reply
996
views
Comment: Comment: indexing the drosophila genome for kallisto
14 months ago by gogeni5529 ▴ 80
0
votes
0
replies
503
views
Setting the size for finding motifs using homer
motif homer
15 months ago by gogeni5529 ▴ 80
0
votes
0
replies
747
views
Comment: Comment: cluster annotation in single-cell (-nuclei) RNA-Seq or multiome experiments
15 months ago by gogeni5529 ▴ 80
1
vote
2
replies
747
views
cluster annotation in single-cell (-nuclei) RNA-Seq or multiome experiments
celldex annotation singler scRNAseq clustering
15 months ago by gogeni5529 ▴ 80
0
votes
0
replies
3.4k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.4 years ago by gogeni5529 ▴ 80
0
votes
0
replies
3.4k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.4 years ago by gogeni5529 ▴ 80
0
votes
1
reply
3.4k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.4 years ago by gogeni5529 ▴ 80
0
votes
1
reply
3.4k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.4 years ago by gogeni5529 ▴ 80
0
votes
0
replies
3.4k
views
Comment: Comment: How to run STARsolo run over multiple samples like cellranger
2.4 years ago by gogeni5529 ▴ 80
8
votes
10
replies
3.4k
views
How to run STARsolo run over multiple samples like cellranger
cellranger starsolo
updated 2.4 years ago by 13k • written 2.4 years ago by ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: Which side do I need to trim when having adapter residues in my reads?
3.7 years ago by gogeni5529 ▴ 80
0
votes
1
reply
1.7k
views
Comment: Comment: Which side do I need to trim when having adapter residues in my reads?
3.7 years ago by gogeni5529 ▴ 80
3
votes
5
replies
1.7k
views
Which side do I need to trim when having adapter residues in my reads?
trimmomatic adapters fastqc cutadapt
updated 3.7 years ago by 153k • written 3.7 years ago by ▴ 80
4
votes
1
reply
2.0k
views
proteomics data analysis and non-normality distribution
limma proteomics
updated 4.0 years ago by ★ 3.1k • written 4.0 years ago by ▴ 80
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