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Comment: Comment: How to extract reads that support the structural variants using the vcf file and
2.4 years ago by Medhat 9.7k
76
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14
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16k
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15 follow
Tutorial: List Of Bioinformatics Books
books
updated 16 months ago by 44k • written 11.1 years ago by 9.7k
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Comment: Comment: Select variants that exist in all samples from a merged VCF file using bcftools
2.4 years ago by Medhat 9.7k
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1.7k
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Comment: Comment: Select variants that exist in all samples from a merged VCF file using bcftools
2.4 years ago by Medhat 9.7k
1
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4
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1.7k
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Select variants that exist in all samples from a merged VCF file using bcftools
SNVs bcftools
2.4 years ago by Medhat 9.7k
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1
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824
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Comment: Comment: Tool that finds direct DNA repeats with mismatches
2.8 years ago by Medhat 9.7k
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1.2k
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Comment: Comment: Pipeline version control system, pipeline storage
2.8 years ago by Medhat 9.7k
2
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3
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2.9k
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error while using plant ensembl biomart
software error gene ensembl biomart
updated 2.8 years ago by • 0 • written 6.6 years ago by 9.7k
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0
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599
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Answer: Answer: Retrieve reads overlapping indels
2.9 years ago by Medhat 9.7k
20
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12
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39k
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7 follow
Forum: When To Use Sed Awk Over Perl Or Python
perl python awk
updated 15 months ago by 44k • written 10.5 years ago by 9.7k
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2.2k
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Comment: Comment: install R package
3.0 years ago by Medhat 9.7k
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1.6k
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Comment: Comment: error on extracting a snp from vcf file using bcftools
3.0 years ago by Medhat 9.7k
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1
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1.6k
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Comment: Comment: error on extracting a snp from vcf file using bcftools
3.0 years ago by Medhat 9.7k
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1.6k
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Answer: Answer: error on extracting a snp from vcf file using bcftools
3.0 years ago by Medhat 9.7k
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752
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Job: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
TGS NGS
updated 3.0 years ago by 44k • written 3.1 years ago by 9.7k
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1.0k
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Comment: Comment: Bioinformatician
3.1 years ago by Medhat 9.7k
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1
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1.9k
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Comment: Comment: HISAT2 Genome indexing
3.1 years ago by Medhat 9.7k
2
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1
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1.6k
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Samtools reheader Numerical result out of range
samtools header bam
3.1 years ago by Medhat 9.7k
2
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0
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1.6k
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Answer: Answer: Samtools reheader Numerical result out of range
3.1 years ago by Medhat 9.7k
0
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0
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982
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Comment: Comment: Why we have exons that start and end at the same coordinate?!
3.2 years ago by Medhat 9.7k
2
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2
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982
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Why we have exons that start and end at the same coordinate?!
gtf exon GRCh38
updated 3.2 years ago by 47k • written 3.2 years ago by 9.7k
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1.4k
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Comment: Comment: Gene Labels (ggplot2)
3.2 years ago by Medhat 9.7k
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1
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1.7k
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Answer: Comment: Select one variant from multiple in ALT in VCF file
3.2 years ago by Medhat 9.7k
0
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1
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946
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Comment: C: how to use unix tools to convert VCF genotypes like '1|1' to this '2'
3.3 years ago by Medhat 9.7k
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0
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949
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Comment: C: Structural variations intersection
3.3 years ago by Medhat 9.7k
1
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1
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2.9k
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Comment: C: Problem using PicardTools MarkDuplicates: SortingCollection: There is not enough
3.3 years ago by Medhat 9.7k
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1
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1.3k
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Comment: C: Extracting the Best sequence per genomic region in a genome based on the Best e-
3.3 years ago by Medhat 9.7k
2
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0
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1.3k
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Answer: C: Extracting the Best sequence per genomic region in a genome based on the Best e-
3.3 years ago by Medhat 9.7k
0
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0
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1.0k
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Comment: C: fastqc report and quality check
3.3 years ago by Medhat 9.7k
1
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0
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1.8k
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Comment: C: Pacific Bio Long Reads vs Illumina Short Reads
3.3 years ago by Medhat 9.7k
2
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0
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1.8k
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Comment: C: Pacific Bio Long Reads vs Illumina Short Reads
3.3 years ago by Medhat 9.7k
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0
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3.3k
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Comment: C: Mappability file for hg38
3.4 years ago by Medhat 9.7k
2
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2
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3.3k
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Mappability file for hg38
sequence mappabilit
3.4 years ago by Medhat 9.7k
1
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2
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3.7k
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What do you use to generates summary statistics of sequence and quality data for PacBio?
genome sequence Assembly pacbio next-gen
updated 2.5 years ago by 44k • written 9.9 years ago by 9.7k
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0
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1.8k
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Comment: C: how to change header of fasta file
3.7 years ago by Medhat 9.7k
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0
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4.4k
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Comment: C: Kraken2 Error in buildind NCBI bacterial database
3.7 years ago by Medhat 9.7k
1
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2
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4.4k
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Answer: C: Kraken2 Error in buildind NCBI bacterial database
3.7 years ago by Medhat 9.7k
2
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1
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3.6k
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Answer: A: bcftools error duplicate samples
3.7 years ago by Medhat 9.7k
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0
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4.4k
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Comment: C: Things you wish you knew when entering the bioinformatics field
3.7 years ago by Medhat 9.7k
2
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1
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4.4k
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Comment: C: Things you wish you knew when entering the bioinformatics field
3.7 years ago by Medhat 9.7k
1
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0
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944
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Job: PostDoc position at Human Genome Sequencing Center @ Baylor College of Medicine, Houston, TX, USA
postdoc metagenomics
updated 12 months ago by 44k • written 3.8 years ago by 9.7k
4
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0
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4.3k
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Comment: C: Converting MAF to Fasta
3.8 years ago by Medhat 9.7k
0
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10
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3.9k
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Tools for metagenomics classification using long reads
metagenomics sequen alignment
updated 3.8 years ago by ▴ 30 • written 6.2 years ago by 9.7k
0
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0
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1.3k
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Comment: C: Understanding VCF : 0/0 v 0/1 v 1/0 v 1/1 etc
3.8 years ago by Medhat 9.7k
0
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0
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1.8k
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Comment: C: Convert fastqc.gz file to BED file format
3.8 years ago by Medhat 9.7k
7
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10
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6.9k
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How to filter unique reads from sam file?
bowtie2 sequencing alignment next-gen
updated 2.1 years ago by 44k • written 9.3 years ago by 9.7k
1
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0
replies
1.3k
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News: Pan-Structural Variation hackathon in the Cloud (Remote hackathon)
structural-variants sequencing
updated 12 months ago by 44k • written 3.8 years ago by 9.7k
1
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0
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18k
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Comment: C: python: find percentage of match between two sequences
3.8 years ago by Medhat 9.7k
10
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16
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2.3k
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Forum: Guide for posting better questions
meta
updated 14 months ago by 44k • written 7.8 years ago by 9.7k
0
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0
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1.2k
views
Comment: C: ORFs finding tools
4.0 years ago by Medhat 9.7k
1,009 results • Page 2 of 21
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