Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: 1000genomes • reset
or   Classic search
<prev • 120 results • page 1 of 4 • next >
9
votes
1
answer
4.6k
views
10 follow
1
answer
Annovar Annotation With 1000G
annovar 1000genomes written 6.6 years ago by daphnarisseeuw • 30 • updated 15 days ago by biotefarosero • 0
2
votes
1
answer
140
views
1
answer
Access 1000 Genomes non-imputed data set
vcf 1000genomes written 7 weeks ago by aadhirareddy1323 • 30
2
votes
1
answer
98
views
1
answer
Missing variants in hg38 lift-over of 1000-genomes data
vcf 1000genomes written 8 weeks ago by gokberk • 60
4
votes
0
answers
126
views
0
answers
Extracting super-population allele frequencies from 1000 genomes (phase 3) data
vcf 1000genomes written 8 weeks ago by gokberk • 60
0
votes
0
answers
201
views
0
answers
BCFTools Query: Avoid grouping Alt Alleles
vcf 1000genomes bcftools annotation written 4 months ago by jon.klonowski • 30
0
votes
0
answers
213
views
0
answers
Mate mismatch errors in 1000genomes CRAM files
validatesam 1000genomes fixmate matepairs cram written 7 months ago by Mehulsharma.253 • 10
3
votes
0
answers
1.3k
views
6 follow
0
answers
Extract SNPs and SNP ID's from vcf file
vcf 1000genomes snps extract written 22 months ago by aadhirareddy1323 • 30 • updated 8 months ago by zx8754 ♦ 8.0k
3
votes
1
answer
1.6k
views
1
answer
How to extract SNPs from vcf file based on Population
vcf 1000genomes linux written 19 months ago by aadhirareddy1323 • 30 • updated 8 months ago by zx8754 ♦ 8.0k
3
votes
2
answers
860
views
5 follow
2
answers
Count the number of homozygous and heterozygous variants in VCF file
1000genomes allele awk count written 9 months ago by aadhirareddy1323 • 30
10
votes
2
answers
853
views
7 follow
2
answers
1000Genomes population allele frequencies for list of SNPs
1000genomes snps written 8 months ago by sonia.olaechea • 90 • updated 8 months ago by Pierre Lindenbaum ♦ 122k
6
votes
1
answer
1.6k
views
8 follow
1
answer
Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes vep vcf2maf ensembl written 2.2 years ago by eurioste • 20 • updated 11 months ago by zx8754 ♦ 8.0k
1
vote
0
answers
678
views
0
answers
How to find rs numbers from Coriell ID
1000genomes rs numbers dbsnp coriell id written 14 months ago by kspata • 60
2
votes
1
answer
3.3k
views
1
answer
1000 Genomes and ESP Populations in Exome Aggregation Consortium Data
1000genomes esp exac evs 1000 genomes written 4.8 years ago by Vivek • 2.3k • updated 14 months ago by Biostar ♦♦ 20
4
votes
0
answers
652
views
0
answers
Compare allele frequency of SNPs in my data to their allele frequency in different human populations - ExAC vs 1000 Genomes vs Other?
maf 1000genomes exac snp sequencing written 15 months ago by gaelgarcia05 • 190
1
vote
0
answers
714
views
0
answers
Discrepencies between ANNOVAR and Gencode annotations of 1000 genomes
1000genomes snp annotation written 23 months ago by spiral01 • 80 • updated 21 months ago by Biostar ♦♦ 20
0
votes
0
answers
953
views
0
answers
comparison of exome data to the 1000Genomes WGS data
exome 1000genomes plink snp written 21 months ago by gabili • 0 • updated 21 months ago by trausch • 1.4k
0
votes
1
answer
683
views
1
answer
Finding SNPs in 1000genomes populations
1000genomes gwas written 22 months ago by andrew.ghaiyed • 0
0
votes
0
answers
735
views
0
answers
Error in Adding 1000Genomes Ancestral Allele info: Using VCF tools fill-aa
1000genomes tabix faidx samtools vcftools written 22 months ago by shrutishreyajha • 0
3
votes
1
answer
940
views
1
answer
Slicing a vcf file to just a few thousand SNPs with PyVCF.
vcf python 1000genomes written 2.3 years ago by Pedro Morell • 10 • updated 2.3 years ago by Pierre Lindenbaum ♦ 122k
0
votes
2
answers
704
views
2
answers
POS Length of 1000 genomes VCF
vcf 1000genomes vcftools written 2.4 years ago by sebastianvencken • 0 • updated 2.4 years ago by Mitch Bekritsky • 1.1k
0
votes
1
answer
1.4k
views
1
answer
Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
1000genomes variant snp written 5.4 years ago by Zhenyu Zhang • 260 • updated 2.4 years ago by Biostar ♦♦ 20
2
votes
1
answer
3.2k
views
5 follow
1
answer
Vcf-Consensus For Individuals From 1000 Genomes
1000genomes written 5.8 years ago by sophix • 20 • updated 2.5 years ago by rajesh.msch • 0
0
votes
0
answers
846
views
0
answers
1000 genomes, meaning of the color of pie charts for population genetic
1000genomes snp population genetics written 2.8 years ago by bzhtgb • 10 • updated 2.7 years ago by Biostar ♦♦ 20
1
vote
0
answers
1.2k
views
0
answers
Tool: bed_to_tabix: Download the variants from 1,000 Genomes in the regions defined in one or more BED files.
cli python 1000genomes tool linux written 2.8 years ago by Juan Manuel Berros • 80
0
votes
0
answers
1.2k
views
0
answers
How to use the 1000Genomes data (hapmap data) to select tag-SNPs in HaploView?
hapmap 1000genomes snp written 3.0 years ago by psycolt2011 • 0 • updated 2.9 years ago by Biostar ♦♦ 20
0
votes
0
answers
1.5k
views
0
answers
Changing to ancestral/derived states using vcftools
vcf 1000genomes written 2.9 years ago by GabrielMontenegro • 530
4
votes
1
answer
2.1k
views
1
answer
Filter VCF by sample?
1000genomes vcftools written 3.0 years ago by cmdcolin • 1.2k • updated 3.0 years ago by trausch • 1.4k
2
votes
0
answers
878
views
0
answers
BWA: Importing a third-party indexed genome
1000genomes alignment grch38 bwa written 3.0 years ago by GD • 30
0
votes
0
answers
864
views
0
answers
Difference between evidence only and evidence support?
genome 1000genomes bam alignment sequencing written 3.1 years ago by severalorks • 90
1
vote
1
answer
2.4k
views
1
answer
Using VCFtools to obtain fasta files
genome fasta vcf vcftools 1000genomes written 3.1 years ago by severalorks • 90
<prev • 120 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • Germany, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 802 users visited in the last hour