Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: 1000genomes • reset
or   Classic search
<prev • 118 results • page 1 of 4 • next >
0
votes
0
answers
95
views
0
answers
BCFTools Query: Avoid grouping Alt Alleles
vcf 1000genomes bcftools annotation written 3 days ago by jon.klonowski • 10
0
votes
0
answers
136
views
0
answers
Mate mismatch errors in 1000genomes CRAM files
validatesam 1000genomes fixmate matepairs cram written 3 months ago by Mehulsharma.253 • 10
3
votes
0
answers
1.1k
views
6 follow
0
answers
Extract SNPs and SNP ID's from vcf file
vcf 1000genomes snps extract written 18 months ago by aadhirareddy1323 • 20 • updated 4 months ago by zx8754 ♦ 7.1k
3
votes
1
answer
1.2k
views
1
answer
How to extract SNPs from vcf file based on Population
vcf 1000genomes linux written 15 months ago by aadhirareddy1323 • 20 • updated 4 months ago by zx8754 ♦ 7.1k
3
votes
2
answers
562
views
5 follow
2
answers
Count the number of homozygous and heterozygous variants in VCF file
1000genomes allele awk count written 4 months ago by aadhirareddy1323 • 20
6
votes
2
answers
460
views
5 follow
2
answers
1000Genomes population allele frequencies for list of SNPs
1000genomes snps written 4 months ago by sonia.olaechea • 60 • updated 4 months ago by Pierre Lindenbaum ♦ 119k
6
votes
1
answer
1.4k
views
8 follow
1
answer
Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes vep vcf2maf ensembl written 22 months ago by eurioste • 20 • updated 7 months ago by zx8754 ♦ 7.1k
1
vote
0
answers
521
views
0
answers
How to find rs numbers from Coriell ID
1000genomes rs numbers dbsnp coriell id written 10 months ago by kspata • 40
2
votes
1
answer
3.1k
views
1
answer
1000 Genomes and ESP Populations in Exome Aggregation Consortium Data
1000genomes esp exac evs 1000 genomes written 4.5 years ago by Vivek • 2.2k • updated 10 months ago by Biostar ♦♦ 20
4
votes
0
answers
524
views
0
answers
Compare allele frequency of SNPs in my data to their allele frequency in different human populations - ExAC vs 1000 Genomes vs Other?
maf 1000genomes exac snp sequencing written 10 months ago by gaelgarcia05 • 190
1
vote
0
answers
647
views
0
answers
Discrepencies between ANNOVAR and Gencode annotations of 1000 genomes
1000genomes snp annotation written 18 months ago by spiral01 • 80 • updated 17 months ago by Biostar ♦♦ 20
0
votes
0
answers
827
views
0
answers
comparison of exome data to the 1000Genomes WGS data
exome 1000genomes plink snp written 17 months ago by gabili • 0 • updated 17 months ago by trausch • 1.2k
0
votes
1
answer
607
views
1
answer
Finding SNPs in 1000genomes populations
1000genomes gwas written 18 months ago by andrew.ghaiyed • 0
0
votes
0
answers
628
views
0
answers
Error in Adding 1000Genomes Ancestral Allele info: Using VCF tools fill-aa
1000genomes tabix faidx samtools vcftools written 18 months ago by shrutishreyajha • 0
3
votes
1
answer
839
views
1
answer
Slicing a vcf file to just a few thousand SNPs with PyVCF.
vcf python 1000genomes written 24 months ago by Pedro Morell • 10 • updated 24 months ago by Pierre Lindenbaum ♦ 119k
0
votes
2
answers
628
views
2
answers
POS Length of 1000 genomes VCF
vcf 1000genomes vcftools written 2.1 years ago by sebastianvencken • 0 • updated 2.1 years ago by Mitch Bekritsky • 1.1k
0
votes
1
answer
1.3k
views
1
answer
Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
1000genomes variant snp written 5.1 years ago by Zhenyu Zhang • 240 • updated 2.1 years ago by Biostar ♦♦ 20
2
votes
1
answer
3.1k
views
5 follow
1
answer
Vcf-Consensus For Individuals From 1000 Genomes
1000genomes written 5.5 years ago by sophix • 20 • updated 2.2 years ago by rajesh.msch • 0
0
votes
0
answers
770
views
0
answers
1000 genomes, meaning of the color of pie charts for population genetic
1000genomes snp population genetics written 2.4 years ago by bzhtgb • 10 • updated 2.4 years ago by Biostar ♦♦ 20
1
vote
0
answers
1.1k
views
0
answers
Tool: bed_to_tabix: Download the variants from 1,000 Genomes in the regions defined in one or more BED files.
cli python 1000genomes tool linux written 2.4 years ago by Juan Manuel Berros • 80
0
votes
0
answers
1.1k
views
0
answers
How to use the 1000Genomes data (hapmap data) to select tag-SNPs in HaploView?
hapmap 1000genomes snp written 2.7 years ago by psycolt2011 • 0 • updated 2.6 years ago by Biostar ♦♦ 20
0
votes
0
answers
1.4k
views
0
answers
Changing to ancestral/derived states using vcftools
vcf 1000genomes written 2.6 years ago by GabrielMontenegro • 520
4
votes
1
answer
1.9k
views
1
answer
Filter VCF by sample?
1000genomes vcftools written 2.7 years ago by cmdcolin • 1.2k • updated 2.6 years ago by trausch • 1.2k
2
votes
0
answers
819
views
0
answers
BWA: Importing a third-party indexed genome
1000genomes alignment grch38 bwa written 2.7 years ago by GD • 30
0
votes
0
answers
790
views
0
answers
Difference between evidence only and evidence support?
genome 1000genomes bam alignment sequencing written 2.8 years ago by severalorks • 90
1
vote
1
answer
2.1k
views
1
answer
Using VCFtools to obtain fasta files
genome fasta vcf vcftools 1000genomes written 2.8 years ago by severalorks • 90
2
votes
1
answer
1.3k
views
1
answer
Using VCFtools to find which population codes individuals in a vcf file belong to
vcf 1000genomes vcftools population-code written 2.8 years ago by severalorks • 90 • updated 2.8 years ago by Vincent Laufer • 1.0k
2
votes
1
answer
1.5k
views
1
answer
how to find the haplotype info in population genomic databases
1000genomes haplotype exac written 2.8 years ago by CrazyB • 210 • updated 2.8 years ago by Denise - Open Targets • 4.9k
15
votes
4
answers
6.3k
views
5 follow
4
answers
Retrieve Single Vcf From List Of Snp Rs#
vcf 1000genomes tabix written 6.3 years ago by Peixe • 580 • updated 2.8 years ago by Scott • 80
37
votes
7
answers
10k
views
25 follow
7
answers
Forum: A Database Of Signatures Of Selection In The 1000 Genomes Dataset
1000genomes forum selection human written 5.1 years ago by Giovanni M Dall'Olio ♦ 26k • updated 2.8 years ago by mwhart • 0
<prev • 118 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • United Kingdom, 2 minutes ago
  • United States, 3 minutes ago
  • Singapore, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1033 users visited in the last hour