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<prev • 128 results • page 1 of 5 • next >
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filtered and dropped vcfs empty when filtering 1000 gemomes variants with Annova
annovar germline annotation 1000genomes written 6 weeks ago by ekwame • 60
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BWA: Importing a third-party indexed genome
1000genomes alignment grch38 bwa written 4.1 years ago by GD • 30 • updated 6 weeks ago by Biostar ♦♦ 20
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How Can I Make An Ld Plot Of My Region Of Interest Using 1000 Genomes Data?
1000genomes haplotype ld snp written 8.3 years ago by mdgallagher71 • 20 • updated 3 months ago by Biostar ♦♦ 20
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Reference Data Set Download from 1000 genomes
1000genomes 1kg download written 4 months ago by karthick.n • 10
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113
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1000Genomes exome vcf
vcf 1000genomes exome written 4 months ago by sonia.olaechea • 130
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allele frequencies for GWAS from 1000genomes or HRC
hrc gwas summary data eaf 1000genomes written 4 months ago by mk19726 • 10
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Conversion of the vcf file of structural variants in bed format
vcf bed structural variant 1000genomes written 4 months ago by Myosotis1979 • 10
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1000 genomes, meaning of the color of pie charts for population genetic
1000genomes snp population genetics written 3.8 years ago by bzhtgb • 10 • updated 5 months ago by Biostar ♦♦ 20
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1000Genomes population allele frequencies for list of SNPs
1000genomes snps written 21 months ago by sonia.olaechea • 130 • updated 7 months ago by Biostar ♦♦ 20
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1000 Genomes phase 3 sample numbers do not add up
genome 1000genomes vcf population written 9 months ago by florin.ratajczak • 0
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Any fast way to download 1000 Genome Phase 3?
1000genomes aspera fasp written 10 months ago by b.ambrozio • 20
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Any practical example/tutorial on how to simulate phenotypes from 1000 Genomes?
1000genomes gcta written 10 months ago by b.ambrozio • 20
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Annovar Annotation With 1000G
annovar 1000genomes written 7.7 years ago by daphnarisseeuw • 30 • updated 13 months ago by biotefarosero • 0
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322
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Access 1000 Genomes non-imputed data set
vcf 1000genomes written 14 months ago by aadhirareddy1323 • 30
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Missing variants in hg38 lift-over of 1000-genomes data
vcf 1000genomes written 15 months ago by gokberk • 60
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Extracting super-population allele frequencies from 1000 genomes (phase 3) data
vcf 1000genomes written 15 months ago by gokberk • 60
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BCFTools Query: Avoid grouping Alt Alleles
vcf 1000genomes bcftools annotation written 17 months ago by jon.klonowski • 70
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Mate mismatch errors in 1000genomes CRAM files
validatesam 1000genomes fixmate matepairs cram written 20 months ago by Mehulsharma.253 • 10
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Extract SNPs and SNP ID's from vcf file
vcf 1000genomes snps extract written 2.9 years ago by aadhirareddy1323 • 30 • updated 21 months ago by zx8754 ♦ 9.6k
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How to extract SNPs from vcf file based on Population
vcf 1000genomes linux written 2.7 years ago by aadhirareddy1323 • 30 • updated 21 months ago by zx8754 ♦ 9.6k
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Count the number of homozygous and heterozygous variants in VCF file
1000genomes allele awk count written 22 months ago by aadhirareddy1323 • 30
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8 follow
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Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes vep vcf2maf ensembl written 3.3 years ago by eurioste • 20 • updated 2.0 years ago by zx8754 ♦ 9.6k
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How to find rs numbers from Coriell ID
1000genomes rs numbers dbsnp coriell id written 2.2 years ago by kspata • 70
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1000 Genomes and ESP Populations in Exome Aggregation Consortium Data
1000genomes esp exac evs 1000 genomes written 5.9 years ago by Vivek • 2.4k • updated 2.3 years ago by Biostar ♦♦ 20
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Compare allele frequency of SNPs in my data to their allele frequency in different human populations - ExAC vs 1000 Genomes vs Other?
maf 1000genomes exac snp sequencing written 2.3 years ago by gaelgarcia05 • 210
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Discrepencies between ANNOVAR and Gencode annotations of 1000 genomes
1000genomes snp annotation written 3.0 years ago by spiral01 • 100 • updated 2.8 years ago by Biostar ♦♦ 20
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comparison of exome data to the 1000Genomes WGS data
exome 1000genomes plink snp written 2.8 years ago by gabili • 0 • updated 2.8 years ago by trausch • 1.5k
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Finding SNPs in 1000genomes populations
1000genomes gwas written 2.9 years ago by andrew.ghaiyed • 0
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Error in Adding 1000Genomes Ancestral Allele info: Using VCF tools fill-aa
1000genomes tabix faidx samtools vcftools written 2.9 years ago by shrutishreyajha • 0
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Slicing a vcf file to just a few thousand SNPs with PyVCF.
vcf python 1000genomes written 3.4 years ago by Pedro Morell • 10 • updated 3.4 years ago by Pierre Lindenbaum ♦ 130k
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