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graph dataset, drug prediction
R written 3 hours ago by mailtothirugnanam • 0
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Trouble with Cyclin D3 in the Golub dataset
R gene expression written 4 hours ago by fuellen • 0
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107
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1
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R for loop
R written 14 hours ago by jordi.planells • 10 • updated 10 hours ago by Gautier Richard • 80
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78
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5 follow
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TFBS enrichiment analysis
gene R jaspar arabidopsis tfbstools written 16 hours ago by mannoulag1 • 60 • updated 13 hours ago by Alex Reynolds ♦ 27k
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109
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5 follow
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What are SizeFactors
R rna-seq normalization written 4 days ago by 2405592M • 20
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Extract novel motifs from protein multiple sequence alignment
R alignment motif written 17 hours ago by dim.thebiologist • 0
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GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
genomicdatacommons bioconductor R http written 1 day ago by mk • 70 • updated 18 hours ago by Sean Davis ♦ 25k
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Showing samples in or out of a range central tendencies
R ggplot2 written 23 hours ago by F • 3.2k
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126
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ComBat correction with one batch containing only one sample - keep or remove?
proteome sva combat R written 10 weeks ago by hesse.sebastian • 20 • updated 1 day ago by Biostar ♦♦ 20
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How to generate a short sequence that does not align to the hg38?
R alignment written 2 days ago by r.tor • 40
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Significance of motifs around mutations
assembly R written 2 days ago by banerjeeshayantan • 80
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loop several conditions R
R loop written 2 days ago by julrodr80 • 0 • updated 2 days ago by Michael Dondrup ♦ 45k
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Normalizing using Seurat with large numbers of samples
scrna-seq R single cell written 3 days ago by Kristin Muench • 350
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120
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Phased Genotypes information
R linux written 3 days ago by paolo002 • 100 • updated 3 days ago by RamRS ♦ 20k
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116
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Dotplot for filtered pathways result
pathways ggplot2 clusterprofiler R dotplot written 3 days ago by Leite • 310 • updated 3 days ago by RamRS ♦ 20k
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135
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RNA-Seq with 4 conditions - Analysis design choice with DESeq2
R rna-seq written 3 days ago by lu.ne • 50
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1
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LIMMA analysis with 2 samples in comparison group
proteomics R limma written 3 days ago by hesse.sebastian • 20
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Design matrix for voom: with or without batch blocking?
proteomics R limma voom written 3 days ago by hesse.sebastian • 20 • updated 3 days ago by i.sudbery ♦ 3.2k
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Pick soft threshold for co-expression analysis and filtering step
wgcna network coexpression rna-seq R written 3 days ago by Biologist • 130 • updated 3 days ago by Kevin Blighe ♦ 35k
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Haplotype association in case-control study with R
R haplotype case-control snp beagle written 3 days ago by melania 2282 • 0
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Job: Postdoctoral Fellow - Bioinformatics @ The Beckman Research Institute of City of Hope, Duarte, California, USA
perl R job python written 4 days ago by alung • 0 • updated 4 days ago by RamRS ♦ 20k
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Error when using GOBar, GOBubble, GOChord function from GOplot package
R rna-seq written 4 days ago by gowthamee • 0 • updated 4 days ago by genomax ♦ 60k
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143
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Simulation using sim1000G tool
R snp written 5 months ago by katkota.a • 0 • updated 4 days ago by apdim9 • 0
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Historical list of of Affymetrix arrays
gene R microarray written 4 days ago by andbeonetraveler • 0 • updated 4 days ago by genomax ♦ 60k
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News: Workshop: 16S rRNA gene Metabarcoding (Berlin. 3-7 April 2017)
R news next-gen blast alignment written 23 months ago by carlopecoraro2 • 790
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group samples based on shared mutations in a single multi samples vcf file
vcf R shell python written 5 days ago by ahmedakhokhar • 110 • updated 4 days ago by Pierre Lindenbaum ♦ 116k
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how to combine standard deviations and mean for each group?
R normalization written 5 days ago by mohammadhassanj • 50
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6 follow
1
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Pvclust:Error In Clustering
R clustering written 4.9 years ago by Diana • 750 • updated 5 days ago by dmitry.pesko • 0
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73
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How to map SNP rsids to genes and flanks
gene R sequence snp genome written 5 days ago by robjohn70000 • 120 • updated 5 days ago by Emily_Ensembl ♦ 16k
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109
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How to calculate dinucleotide A/T patterns in a given human reference genome region?
R sequence written 6 days ago by Ashley • 40
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