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my file do not have duplicates, but it still shows duplicate are not allow
R rna-seq written 54 minutes ago by mikysyc2016 • 10
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95
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5 follow
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 19 hours ago by egeulgen • 240
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64
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1
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How tximport work with gencode transcripts?
R rna-seq written 1 day ago by Sharon • 320 • updated 18 hours ago by Kevin Blighe ♦ 21k
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Matched paired DEA analysis of BRCA samples using TCGAbiolinks, works for paired = FALSE but not paired = TRUE
tcgabiolinks R rna-seq written 1 day ago by aluesley1 • 20
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Job: Bioinformatics and computational biology research associate (predoctoral) positions, The University of Alabama at Birmingham, AL, USA
R ngs computational biology biinformatics job written 23 hours ago by malaykbasu • 10 • updated 23 hours ago by genomax ♦ 49k
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Job: Job: Bioinformatics Analyst at the University of Virginia, Charlottesville, VA, USA
R chip-seq job rna-seq written 1 day ago by Stephen ♦ 2.6k • updated 1 day ago by genomax ♦ 49k
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Can genomicranges do bedtools-like intersection operations?
R written 1 day ago by endrebak • 640
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Matched Paired Tumour-Normal DEA of BRCA using data downloaded using TCGAbiolinks
tcgabiolinks R tcga written 3 days ago by aluesley1 • 20 • updated 1 day ago by Kevin Blighe ♦ 21k
6
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128
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1
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Error while executing "estimateSizeFactors" from DESeq2
software error R deseq2 written 3 days ago by vkgaur25 • 20 • updated 1 day ago by zx8754 ♦ 4.5k
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87
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Heatmap Plot in R using plot_ly
R written 2 days ago by bandanaschapagain • 20 • updated 2 days ago by genomax ♦ 49k
4
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1
answer
136
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1
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A function for having a multiway intersection
R venn diagram intersection written 3 days ago by jivarajivaraj • 30
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1
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404
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9 follow
1
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Volcano plot help code
R rna-seq written 9 weeks ago by anasofiamoreira94 • 0 • updated 2 days ago by jordi.planells • 0
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129
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5 follow
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Does FDR value change based Fold change cutoff?
R differential expression rna-seq edger statistics written 2 days ago by ravi • 20
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151
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check relatedness of individuals
R next-gen genetics plink snp written 29 days ago by bha • 60 • updated 2 days ago by Biostar ♦♦ 20
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162
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Help with OrderedList
R written 8 weeks ago by sgujja • 20 • updated 2 days ago by Biostar ♦♦ 20
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1
answer
81
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1
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qPCR Ct value to the genome copy number
R pcr written 2 days ago by lokraj2003 • 0 • updated 2 days ago by Kevin Blighe ♦ 21k
4
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3
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704
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5 follow
3
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BagFoot TF foot printing
R bagfoot bagfootr chip-seq written 8 months ago by rbronste • 160 • updated 2 days ago by ucarduygu • 0
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3
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121
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3
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Intersect counts with fragment regions
bedtools R intersect ranges readcounts written 3 days ago by dzisis1986 • 20 • updated 2 days ago by Alex Reynolds ♦ 24k
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1
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75
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1
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Why different tSNE plot with Seurat and Monocle if they'r using the same R package?
single-cell R monocle tsne seurat written 3 days ago by jgarces • 0 • updated 3 days ago by dppb05 • 50
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97
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Software to calculate frequency of mutation by group
genome R alignment assembly written 3 days ago by williamsbrian5064 • 80 • updated 3 days ago by Pierre Lindenbaum ♦ 108k
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how to make this plot for mutation in paired samples?
R next-gen written 4 days ago by jhamy1605 • 0 • updated 4 days ago by igor ♦ 6.2k
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1
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5 follow
1
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Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 8 months ago by Cyriac Kandoth ♦ 5.0k
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1
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488
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1
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Sleuth PCA plots - how to change axis to percentage?
R sleuth pca kallisto rna-seq written 10 months ago by BioBing • 90 • updated 4 days ago by bruce.moran • 410
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2
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104
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How to get plasmid or costruct sequence from fastq file in c.elegans Whole-genome Sequencing?
R sequence sequencing written 4 days ago by giovannaventola3es9 • 0 • updated 4 days ago by jrj.healey • 4.6k
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60
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Population genetic inference from pooled-DNA microsatellite genotyping
R microsatellites pooled dna written 5 days ago by apaspati • 0 • updated 4 days ago by zx8754 ♦ 4.5k
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96
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1
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the bam file used for Diffbind
R chip-seq sequencing written 4 days ago by mikysyc2016 • 10 • updated 4 days ago by jared.andrews07 • 730
48
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6
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18 follow
6
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How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 6.7 years ago by Hamilton • 260 • updated 5 days ago by har-wradim • 20
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93
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1
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Assembling a sequence from the pairs of letters (X,Y)
R sequence written 5 days ago by Bogdan • 510 • updated 5 days ago by zx8754 ♦ 4.5k
2
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1
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69
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question about DiffBind
R chip-seq written 5 days ago by mikysyc2016 • 10 • updated 5 days ago by zx8754 ♦ 4.5k
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61
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Volcano plot for mean fluorescence intensity (flow cytometry) data
R written 5 days ago by jackarnestad • 0
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