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<prev • 7,733 results • page 1 of 258 • next >
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EdgeR and contrasts: How to compare with a group not in the model
R makecontrasts model.matrix rna-seq edger written 9 hours ago by 13530213 • 10 • updated 1 hour ago by h.mon ♦ 30k
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37
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How to find corresponding nucleotide locations (i.e. 123682765-123683049) from a list of chromosomal regions (i.e. 5p14-15, 5q13-15, 5q31-32, etc)
gene R tutorial sequence genome written 2 hours ago by cuib • 0 • updated 1 hour ago by RamRS ♦ 28k
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40
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Heatmap for gene expression
R rna-seq sequencing written 4 hours ago by akashagri19 • 0 • updated 2 hours ago by jkkbuddika • 30
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1
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29
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1
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Using GOplot with data from Gene Ontology Resource
R rna-seq written 9 hours ago by basch • 0 • updated 6 hours ago by jkkbuddika • 30
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Sample size calculation for GWAS?
genome R genetics snp gwas written 10 hours ago by bha • 60
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R data repository to use in shiny app
R shiny written 11 hours ago by gracie • 20
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45
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Permutation test (randomisation test)
gene R sequence monte-carlo written 12 hours ago by shadboltjessica • 0 • updated 12 hours ago by Nicolas Rosewick ♦ 9.0k
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Meta-Analysis of Microarray data (Afyymetrix)
R meta-analysis affymetrix microarray written 16 hours ago by reza • 230
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Ignore case-sensitive letters in R
R microarray written 19 hours ago by smrutimayipanda • 10 • updated 17 hours ago by cpad0112 ♦ 13k
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How to properly analyze following GEO DataSets
geo R bioconductor rna-seq written 19 hours ago by arjuncsubra • 0
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Calculating K2P Distance in R using BLAST+ output
R alignment written 19 hours ago by galbraithenator • 10
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Combining the original replicates and pseudo-replicates for differential binding analysis?
replicates R diffbind chip-seq written 22 hours ago by maisarasora • 10
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Filter data frame with dplyr
R dplyr filter written 1 day ago by luca • 20 • updated 1 day ago by rpolicastro • 540
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Using Limma in R to get log2 fold change data for GSE series data, want to get rid of iso-form expression value
R limma microarray written 1 day ago by sslimb95 • 0 • updated 1 day ago by Alex Nesmelov • 110
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How to deal with "///" separator in Geo2r when loading data to enrichr
enrichr R geo2r written 1 day ago by vladimir.vinarsky • 0 • updated 1 day ago by dsull • 1.4k
3
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Removing columns from multiple files in R
R microarray written 1 day ago by smrutimayipanda • 10 • updated 1 day ago by genomax ♦ 87k
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Seurat "FindMarkers" and "FindallMarkers" v.s. Scanpy "rank_genes_groups"
single-cell R scrna seurat scanpy written 1 day ago by krorange • 0
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How can I remove the outliers from a boxplot and fill the groups?
R statistics written 2 days ago by dpc • 140 • updated 2 days ago by Alex Reynolds ♦ 30k
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Estimated Number of Cells in 10X vs Cells in Seurat
single-cell R sequencing written 2 days ago by Payal • 90
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107
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Estimating hetero/homogeneity of scRNAseq clusters
scrna-seq R written 6 weeks ago by jrleary • 130 • updated 2 days ago by Biostar ♦♦ 20
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1
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50
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problem installing rtracklayer
software error R written 2 days ago by pegah.taklifi • 0 • updated 2 days ago by h.mon ♦ 30k
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How to choose threshold for filtering low counts before Voom transformation?
R rna-seq written 2 days ago by ihc.europa • 20
3
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1
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129
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1
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Limma: Coefficients not estimable
R limma rna-seq written 4 days ago by Davide • 10 • updated 2 days ago by h.mon ♦ 30k
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1
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80
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Error with gsms
R microarray written 3 days ago by smrutimayipanda • 10 • updated 2 days ago by h.mon ♦ 30k
3
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1
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123
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Add filename as column headers in file
R written 3 days ago by smrutimayipanda • 10 • updated 3 days ago by rpolicastro • 540
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109
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file handling in R
R written 5 days ago by smrutimayipanda • 10 • updated 4 days ago by bioinformatics2020 • 320
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How to extract a peptide sequence (interval) from a FASTA file?
R written 4 days ago by pedro19ms • 20 • updated 4 days ago by bioinformatics2020 • 320
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223
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5 follow
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Loop in R script
software error R assembly genome written 5 days ago by Seq225 • 90 • updated 4 days ago by bioinformatics2020 • 320
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72
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Import Salmon output by tximport
tximport R salmon rna-seq written 4 days ago by koaeb • 0 • updated 4 days ago by RamRS ♦ 28k
5
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1
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125
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1
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For Loop to make new dataframe
R excel written 5 days ago by selplat21 • 10 • updated 5 days ago by rpolicastro • 540
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