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what is * in the NCBI Blosum and PAM matrices
matrix blosum pam written 8 weeks ago by nobu.kim66 • 10
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Calculating Pairwise Alignment Scores
blosum pairwise alignment written 14 months ago by imrbayil • 10 • updated 14 months ago by Benn ♦ 8.0k
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What Blosum matrix to use for ortholog table?
genome phylogeny ortholog blosum written 3.1 years ago by jespinoz • 20
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MODIFYING BLOSUM MATRIX in PSIBLAST/BLAST
blosum psiblast blast written 3.7 years ago by Amita • 0 • updated 3.7 years ago by Santosh Anand ♦ 5.2k
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BLOSUM scores compared to PAM scores
matrix blosum pam scores written 4.3 years ago by Mathis • 0 • updated 4.3 years ago by natasha.sernova • 3.8k
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Peptide Encoding & Feature Extraction
blosum machine learning written 4.4 years ago by carlo.mazzaferro • 20
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BLOSUM80 values differ - but what's the reason?
blosum substitution matrix written 4.7 years ago by _r_am ♦ 32k • updated 4.7 years ago by gearoid • 200
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What does '*' Amino Acid in BLOSUM Matrix of MATLAB mean?
amino acid blosum protein matlab written 4.7 years ago by mithrandir • 40 • updated 4.7 years ago by Michael Dondrup ♦ 48k
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What do the scores in a BLOSUM matrix mean?
score blosum sequence protein alignment written 5.0 years ago by mithrandir • 40 • updated 5.0 years ago by Jean-Karim Heriche ♦ 24k
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Tutorial: A short primer to pairwise alignment
blosum pairwise alignment tutorial blastp pam written 5.5 years ago by Luke Crichton • 370
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Computing PAM and Blosum Substitution Matrices
blosum pam written 6.2 years ago by psetha • 90 • updated 6.2 years ago by Woa • 2.8k
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How to extract the probability of replacing one amino acid by other form BLOSUM matrix?
blosum biopython written 6.6 years ago by shark_1 • 10 • updated 6.6 years ago by Hugues • 250
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