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<prev • 411 results • page 1 of 14 • next >
2
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Open databases for copy number variations similar to TCGA
tcga cnv copy number variation written 1 day ago by akij • 50
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83
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Multiple enteries for a gene in COSMIC variants' browser
gene cosmic cnv mutations sequencing written 3 days ago by marki • 60
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96
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PCA plot for CNV microarray data
microarray cnv pcaplot written 3 days ago by raya.girish • 20
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1
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106
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1
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CNVnator error :Can't determine length for 'chr1'. No reference genome specified.
no reference genome cnvanator cnv written 26 days ago by chevivien • 50 • updated 4 days ago by rbagnall • 1.1k
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126
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Using cnvkit for targeted amplicon sequencing
cnvkit targeted amplicon sequencing reference cnv written 5 days ago by ingrid.schulman • 0
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60
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about using cn.MOPS in detecting CNV in WES of germline-tumor samples
tumor cn.mops cnv written 10 days ago by Bogdan • 250
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172
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Control-FREEC - Segmentation fault (core dumped)
cna cnv freec control-freec written 7 weeks ago by igor • 4.3k • updated 9 days ago by Biostar ♦♦ 20
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92
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What are the best tools/practices for CNV (structural variation) detection/analysis for Illumina family data?
sv wgs snp array wes cnv written 11 days ago by Irina Astrovskaya • 20
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1
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99
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1
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Have the copy numbers (or segment means) in the "minus_germline" TCGA datasets already been compared to normal tissue data?
tcga copy number cnv written 15 days ago by bddesanctis • 0 • updated 12 days ago by Persistent LABS • 710
2
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105
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2
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Detect CNVs from SNP data
genome tool cnv written 16 days ago by misbahabas • 30
10
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6.0k
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3
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TCGA/Broad Institute CNV Files Segment Mean
tcga cnv written 2.8 years ago by dirigible2012 • 300 • updated 16 days ago by kingsire • 0
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76
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Problem in generating GCWinds and MAPPBILITY files for readDepth
genome tool cnv written 17 days ago by misbahabas • 30
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97
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combine CNV calls from different softwares
r-gada quantisnp penncnv cnv merge files written 17 days ago by lilia.romdhane • 10
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2
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158
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5 follow
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Are there NGS-based CNV callers that utilise allele frequency?
cnv written 4 weeks ago by d-cameron • 740 • updated 19 days ago by Eric T. • 1.7k
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103
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1
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CNVKIT scatter --range-list
cnv written 29 days ago by nina.naitatmane • 10 • updated 19 days ago by Eric T. • 1.7k
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81
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How generate mappbility and gcWinds files from Bam files of non human genome
genome cnv written 21 days ago by misbahabas • 30
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67
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Should unplaced scaffolds in reference genome be used to map newly sequenced genome
unplaced scaffolds reference based assembly cnv written 25 days ago by chevivien • 50
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101
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How can I transform CNV output data of Agilent 244K to TCGA/GDC data?
agilent snp tcga cnv affymetrix written 25 days ago by titiro89 • 0
6
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3
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184
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5 follow
3
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Detection of CNVs from vcf file
genome cnv written 4 weeks ago by misbahabas • 30 • updated 4 weeks ago by talalamin • 0
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1
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112
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1
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cnvkit , antitarget , cn , call cnv
cnv written 5 weeks ago by nina.naitatmane • 10 • updated 5 weeks ago by Eric T. • 1.7k
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1
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131
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1
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PSCBS segmentation file header
snp6 parent spcific copy number cnv aroma written 8 weeks ago by vakul.mohanty • 230 • updated 5 weeks ago by Eric T. • 1.7k
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1
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127
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1
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CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 6 weeks ago by nina.naitatmane • 10 • updated 5 weeks ago by Eric T. • 1.7k
4
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1
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115
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1
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Log 2 in CNV
cnv written 6 weeks ago by nina.naitatmane • 10 • updated 5 weeks ago by Eric T. • 1.7k
2
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1
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132
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5 follow
1
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how to determine the controls for cnv
cnv written 5 weeks ago by qyang • 20 • updated 5 weeks ago by Eric T. • 1.7k
2
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2
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916
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2
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EXCAVATOR Not working
excavator tool cnv sequencing written 22 months ago by koenhendriks89 • 40 • updated 6 weeks ago by lm687 • 30
16
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4
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16 follow
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Best Copy Number Variation Tools
cnv written 4.6 years ago by William • 3.9k • updated 7 weeks ago by Paul • 600
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114
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Filter out Non-Diploid segments in FACETS data
R facets cnv sequencing written 7 weeks ago by sviatoslav.kendall • 400
3
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1
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108
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1
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cnv-seq reference hit
cnv-seq readdepth cnv written 8 weeks ago by dovi • 20
2
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158
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0
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Question about CNV analysis on tumors
illumina snp cnv affymetrix written 8 weeks ago by test • 10
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1
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200
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1
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CNVnator Inputs and Outputs
genome cnvnator copy number variation cnv written 10 weeks ago by styer.alex • 0 • updated 8 weeks ago by hunter.call13 • 0
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