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<prev • 757 results • page 1 of 26 • next >
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gender determination and chrX CN calls
cnvkit next-gen cnv sequencing written 1 day ago by erikt • 0
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1
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9 follow
1
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problem in matching the names between file names and patients Id in TCGA
problem in matching tcga cnv written 2.8 years ago by nazaninhoseinkhan • 410 • updated 11 days ago by HB • 0
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76
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List of good CNV detection methods?
algorithm cnv written 14 days ago by 860101959 • 10
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1
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92
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1
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Copy number variations from WES data
wes cnv written 15 days ago by shivangi.agarwal800 • 70 • updated 15 days ago by Rongxin • 30
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Problem using CNVkit with RNA-Seq Data to call CNV with Ensembl GRCh37 v75 annotation file
cnvkit rna-seq cnv written 17 days ago by lumal29 • 80
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how to convert ped files to cnv
convertit cnv ped written 18 days ago by iag.14800108 • 0
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Using ExomeDepth for GRCH38 processed samples to call CNVs
exome exomedepth grch38 cnv written 4 weeks ago by nkausthu • 30
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ExomeDepth negative BF (bayesian factor) values meaning
wes dna-seq cnv written 4 weeks ago by John • 160
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126
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genomewide CNV analysis and plot from low pass WGS data
wgs cnv cnvseq written 5 weeks ago by J.F.Jiang • 860
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17 follow
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How to extract the list of genes from TCGA CNV data
tcga genes cnv written 2.9 years ago by Chaimaa • 250 • updated 10 weeks ago by ycding • 0
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14 follow
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Tool: ClinCNV: CNV detection from short reads
cna variant calling tool cnv written 16 months ago by German.M.Demidov • 1.9k
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135
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Determining breakpoint size in cnvnator-lumpy pipeline
sv cnvnator lumpy cnv written 11 weeks ago by nitinra • 10
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207
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Pipeline for merging vcf files from lumpy and cnvnator and sv filtering
sv wgs cnv written 11 weeks ago by nitinra • 10
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247
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Interpretting cnvkit p-value results
cnvkit cnv written 4 months ago by tjbencomo • 10 • updated 11 weeks ago by Biostar ♦♦ 20
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1
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Does anyone have a list of Copy Number Variation (CNV) Databases? If so please share.
genome gene database cnv written 12 weeks ago by screadore • 10 • updated 12 weeks ago by Pierre Lindenbaum ♦ 134k
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How do I get a vcf file containing germline information paired with tumor and normal
cnvkit cnv written 12 weeks ago by 244349324 • 0 • updated 12 weeks ago by Pierre Lindenbaum ♦ 134k
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2
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170
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2
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A question in terms of definition
genome wgs cnv written 3 months ago by A • 3.9k • updated 3 months ago by Qiongyi • 100
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1
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144
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1
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Explore CNV data from illumina Array
illumina snp cnv written 3 months ago by melania 2282 • 100 • updated 3 months ago by bernatgel • 2.9k
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253
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Help with CNV calling using ExomeDepth
exome exomedepth cnv gcnv R written 3 months ago by luffy • 0
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166
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Download all CNV deletions at specified chromosomal locus
ncbi clinvar variation viewer cnv written 3 months ago by madison.elsaadi • 0
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2
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365
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6 follow
2
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Coverage plot of a complete genome
coverage cnv plot written 3 months ago by frymor2 • 10 • updated 3 months ago by hcinneyjuriya • 0
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120
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Question about Penncnv software
penncnv cnv written 3 months ago by zkafi1370 • 0
3
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149
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CNV data from Illumina OncoArray Cheap analysis
snpchip cnv gwas written 3 months ago by melania 2282 • 100
1
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1
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192
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1
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How to call CNV without normal samples
cnv sequencing written 3 months ago by leovam173 • 10 • updated 3 months ago by abedkurdi10 • 30
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156
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Copy number variation analysis
tcga cnv firebrowse written 3 months ago by anjuraas • 10
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164
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PennCNV Software ; Not reporting CNVs in some samples
snp cnv written 3 months ago by zkafi1370 • 0
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1
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208
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1
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How to merge CNVs of 400 samples?
cnv written 3 months ago by oghzzang • 40 • updated 3 months ago by Pierre Lindenbaum ♦ 134k
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150
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Copy numbers zygosity
zygosity next-gen copynumbers cnv written 3 months ago by jelisavetailic4 • 10
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591
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How to generate the contigs ploidy priors table (yeast) for GATK DetermineGermlineContigPloidy --contig-ploidy-priors option ?
variant-calling gatk cnv gcnv written 7 months ago by mikizu • 0 • updated 3 months ago by xoaib • 0
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best tool to evaluate the CNV status of germline samples using 1x WGS
wgs cnv written 4 months ago by J.F.Jiang • 860
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