Showing: cnvreset
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How to extract the list of genes from TCGA CNV data
tcga genes cnv written 20 hours ago by aouichechaimaa100 • updated 7 hours ago by Kevin Blighe17k
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Understanding cBioPortal data
mrna cna cbioportal cnv data written 15 days ago by 9606300
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Cbioportal/Tcga Cnv Data
copynumber tcga cnv written 4.4 years ago by RoyC120 • updated 17 days ago by Biostar ♦♦ 20
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CNVnator Root File
cnvator cnv written 28 days ago by BAGeno60
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amplicon based germline CNV caller
amplicon cnv germline written 8 months ago by J.F.Jiang690 • updated 29 days ago by Biostar ♦♦ 20
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a realiable algorithm that calls INDELS of length 50bp-300bp in cancer genomes
indel sv snv cnv written 5 weeks ago by Bogdan470 • updated 5 weeks ago by Eric T.2.1k
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CNV detection using BAM file
bam cnv written 5 weeks ago by reza180 • updated 5 weeks ago by Eric T.2.1k
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Detect exon deletion/duplication from NGS amplicon
amplicon ngs cnv written 5 weeks ago by sacha1.1k • updated 5 weeks ago by Eric T.2.1k
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Tools for visualization of CNVs called by XHMM
visualization xhmm cnv written 5 weeks ago by nkausthu20 • updated 5 weeks ago by bernatgel1.1k
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uniqueome mappability file for EXCAVATOR-tool
cnv written 15 months ago by Canh0 • updated 5 weeks ago by xubeisi0
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cnvkit example data
cnvkit bam cnv written 23 months ago by laxvid10 • updated 6 weeks ago by Biostar ♦♦ 20
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benchmarking/validation tools for CNVs
truth set benchmarking cnv validation written 12 months ago by Jackie60 • updated 6 weeks ago by Paul1.0k
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How to use DNAcopy package to analyze Affymetrix SNP array?
R bioconductor copynumber snp cnv written 8 weeks ago by shixiang1994wang0 • updated 7 weeks ago by Eric T.2.1k
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CNVkit segmetrics error
wes cnv germline written 8 weeks ago by SPDouglas0 • updated 7 weeks ago by Eric T.2.1k
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WGS coverage (depth) for CNV detection
wgs cnv written 7 weeks ago by CY100 • updated 7 weeks ago by Eric T.2.1k
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CNV detection for NIPT analysis
cfdna nipt cnv written 4 months ago by martyferr9030 • updated 8 weeks ago by Kritika250
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XHMM and PLINK/Seq problem
plinik/seq xhmm cnv written 23 months ago by martyferr9030 • updated 9 weeks ago by mtkk940
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Recommendations for CNV calling algorithms/programs to benchmark
assembly cnv written 9 weeks ago by seraphya0 • updated 9 weeks ago by Garan360
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Copynumber calculation problem
varscan2 cnv written 10 weeks ago by jinxinhao198840 • updated 10 weeks ago by Kevin Blighe17k
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Merging CNV data with Mutation data and running on MutSigCV
maf merge mutation cnv mutsigcv written 11 weeks ago by sara.younes10 • updated 11 weeks ago by Sean Davis24k
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Clustering of CNV genomic coordinates, take 2
genomic coordinates cluster analysis cnv bed written 12 weeks ago by Sakti340 • updated 12 weeks ago by Sean Davis24k
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visualize CNV data based on WGS
cnv written 3 months ago by Bogdan470 • updated 12 weeks ago by Eric T.2.1k
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