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<prev • 741 results • page 1 of 25 • next >
3
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2
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81
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6 follow
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Coverage plot of a complete genome
coverage cnv plot written 2 days ago by frymor2 • 10 • updated 13 hours ago by hcinneyjuriya • 0
0
votes
0
answers
38
views
0
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Question about Penncnv software
penncnv cnv written 1 day ago by zkafi1370 • 0
2
votes
0
answers
42
views
0
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CNV data from Illumina OncoArray Cheap analysis
snpchip cnv gwas written 3 days ago by melania 2282 • 90
1
vote
1
answer
69
views
1
answer
How to call CNV without normal samples
cnv sequencing written 9 days ago by leovam173 • 0 • updated 8 days ago by abedkurdi10 • 30
0
votes
0
answers
73
views
0
answers
Copy number variation analysis
tcga cnv firebrowse written 10 days ago by anjuraas • 10
0
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0
answers
95
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0
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PennCNV Software ; Not reporting CNVs in some samples
snp cnv written 14 days ago by zkafi1370 • 0
1
vote
1
answer
82
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1
answer
How to merge CNVs of 400 samples?
cnv written 15 days ago by oghzzang • 40 • updated 15 days ago by Pierre Lindenbaum ♦ 131k
1
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0
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59
views
0
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Copy numbers zygosity
zygosity next-gen copynumbers cnv written 17 days ago by jelisavetailic4 • 10
0
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0
answers
357
views
0
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How to generate the contigs ploidy priors table (yeast) for GATK DetermineGermlineContigPloidy --contig-ploidy-priors option ?
variant-calling gatk cnv gcnv written 4 months ago by mikizu • 0 • updated 17 days ago by xoaib • 0
0
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0
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93
views
0
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best tool to evaluate the CNV status of germline samples using 1x WGS
wgs cnv written 26 days ago by J.F.Jiang • 850
1
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0
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113
views
0
answers
Copy Number Variations
gene vcf ngs cnv control-freec written 27 days ago by Nyksubuz • 10
0
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0
answers
115
views
0
answers
GATK somatic CNV results
gatk cnv somatic written 6 weeks ago by cocchi.e89 • 110
0
votes
0
answers
141
views
0
answers
Interpretting cnvkit p-value results
cnvkit cnv written 6 weeks ago by tjbencomo • 10
0
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0
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127
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0
answers
CNVkit 0.9.7: problems with incorrectly filtered bins, batch command outputs
cnvkit targeted amplicon panel cnv written 7 weeks ago by erikt • 0
0
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0
answers
77
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0
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HRD score LST?
cnv written 7 weeks ago by vctrm67 • 20 • updated 7 weeks ago by RamRS ♦ 30k
0
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0
answers
124
views
0
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Using GRIN on WES data and general driver analysis preprocessing
loh cnv sequencing written 8 weeks ago by andrei.rajkovic • 0
1
vote
1
answer
157
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1
answer
Is it possible to compute the Loss of heterocigosity from the Copy number variation (CNV) data file ?
wgs cnv written 9 weeks ago by aliciapm94 • 0 • updated 9 weeks ago by d-cameron • 2.3k
0
votes
0
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98
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0
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Calling copynumbers from Single-end GBS (genome by sequencing) data
cnv single-end control-freec gbs written 9 weeks ago by mikeruigrok • 0
2
votes
1
answer
470
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1
answer
How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr cnv wgs written 7 months ago by Jordan • 1.2k • updated 10 weeks ago by Kevin Blighe ♦ 67k
0
votes
1
answer
118
views
1
answer
Copy number variation data for population structure analysis
cnv written 10 weeks ago by rthapa • 40 • updated 10 weeks ago by khalid.belkhir • 30
1
vote
1
answer
104
views
1
answer
CNV .vcf retrieve involved genes
vcf gatk genes cnv written 10 weeks ago by cocchi.e89 • 110
1
vote
1
answer
145
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1
answer
convert GATK germline CNV .vcf output to .seg/.cns format to plot
vcf gatk seg cnv cns written 10 weeks ago by cocchi.e89 • 110 • updated 10 weeks ago by newbio17 • 290
3
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0
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212
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0
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Somatic SNVs vs. Germline SNPs for allele-specific copy number analysis
cnv written 11 weeks ago by vctrm67 • 20
0
votes
0
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151
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0
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Why is a CNV of -1.8, 0.7 (...) more important than saying 2-fold, 3-fold (...) ?
cnv written 11 weeks ago by Penkster • 0
0
votes
0
answers
262
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0
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GISTIC 2.0 for sequencing data
gistic wgs cna cnv sequencing written 11 weeks ago by vctrm67 • 20
0
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0
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173
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0
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Calling CNVs using a single tumor sample
cnv written 11 weeks ago by vctrm67 • 20
2
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2
answers
2.7k
views
2
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How to convert and annotate apt-probeset-genotype into PLINK format
affymetrix6 snp plink cnv penncnv written 4.8 years ago by Myosotis1979 • 10 • updated 11 weeks ago by gitanjali.tandon • 0
0
votes
0
answers
118
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0
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CNV segmentation purpose
cnv written 12 weeks ago by vctrm67 • 20
0
votes
0
answers
162
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0
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Structural variations (SV calling using Parliament2)
sv software error cnv written 3 months ago by Nitha • 10 • updated 3 months ago by Kevin Blighe ♦ 67k
2
votes
2
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309
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2
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TCGA CNV data 1p/19q codeletion (whole arm deletion)
tcga gbm cnv codeletion lgg written 5 months ago by kwanghoon • 10 • updated 3 months ago by gabriel.rosser • 190
<prev • 741 results • page 1 of 25 • next >
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