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2
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1
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60
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1
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edgeR analysis outputs FDR equals 1
fdr rna-seq edger written 8 days ago by silas008 • 80 • updated 8 days ago by swbarnes2 ♦ 5.5k
1
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1
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112
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1
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Setting a threshold for FDR correction
false discovery rate fdr multiple testing written 21 days ago by kelly.wang135 • 30 • updated 21 days ago by russhh • 4.4k
2
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0
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559
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0
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What is the ideal FDR and fold change cutoff to consider in a RNA-seq experiment and which one should be the priority for selecting the DEGs?
fdr deseq2 rna-seq deg fold change written 7 months ago by aishu.jp • 10
6
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2
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489
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5 follow
2
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qvalues are the same, thus yielding insignificant results
fdr adjustedpvalue gene analysis qvalue written 9 months ago by ulapei • 20
2
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0
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386
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0
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no significant FDR in gene enrichment analysis
fdr enrichment degs rna-seq written 9 months ago by nazaninhoseinkhan • 360
0
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0
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408
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Correcting for multiple-testing - interaction model with large differences in variance between groups
fdr deseq2 fdrtool multifactorial design written 11 months ago by npharmston • 0
0
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0
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480
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0
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Significantly changed genes increase after Benjamini Hochberg correction
fdr matlab ttest microarray written 18 months ago by hkarakurt • 50
3
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1
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700
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5 follow
1
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what to do when adjusted p-values are not acceptable in RNASeq?
fdr rna-seq written 20 months ago by nazaninhoseinkhan • 360
0
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0
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479
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0
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No significant differential methylated regions in control and eutopic samples comparison
differentially methylated regions fdr written 21 months ago by niutster • 80
3
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1
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480
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1
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Should p-values resulting from the experimental validation of genes selected by FDR also be FDR-corrected?
fdr p-values multiple testing validation written 23 months ago by correlationmatrix • 20 • updated 23 months ago by Nicolas Rosewick ♦ 7.6k
2
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1
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931
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1
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SPIA results show FDR=1 for RNA-Seq differential expression data downloaded from TCGA
fdr spia tcga rna-seq differential expression written 2.1 years ago by asnanizami • 0 • updated 2.1 years ago by theobroma22 • 1.1k
1
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2
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1.4k
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2
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Multiple hypothesis testing, Fst outliers
fdr population genomics gpat pfst fst written 2.2 years ago by chrisbala10 • 10
8
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1
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1.1k
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1
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Fold Change accepts, FDR denies; which one to use ?
fdr fc rna-seq deg written 2.3 years ago by Farbod • 3.2k • updated 2.3 years ago by Devon Ryan ♦ 90k
0
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0
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1.7k
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0
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How to correctly calculate Storey-Tibshriani FDR Q Values using R Package "QValue"?
fdr R p value python q value written 2.4 years ago by Tom • 20
0
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2
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865
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2
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PWMs and FDR
fdr pwm multiple-hypothesis-testing written 2.5 years ago by Opt • 40 • updated 2.5 years ago by Santosh Anand ♦ 4.7k
1
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1
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1.5k
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1
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MatrixeQTL FDR and Q-Qplot
fdr matrixeqtl tool written 4.2 years ago by toyan.j.p • 30 • updated 2.7 years ago by Laura • 0
3
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2
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1.3k
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2
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What is the criteria for significant DEGs when FDR value for all genes is 1?
fdr gfold written 2.8 years ago by mirza • 80
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1.5k
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0
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calculating FDR threshold for FST and PBS statistics
fdr fst pbs genome-wide significance written 3.2 years ago by ald4786 • 0
1
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1
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1.4k
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1
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How to determine which SNPs are above FDR line?
fdr R snp gwas written 3.2 years ago by joshf • 20 • updated 3.2 years ago by Kolea Zimmerman • 80
2
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0
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1.2k
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0
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False discovery rate (FDR) Microarray
fdr microarray written 3.4 years ago by jaqy • 20 • updated 3.4 years ago by SES ♦ 8.2k
0
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1.1k
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0
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p-value correction in meta-analysis of cancer cohorts
fdr meta analysis p-value correction cancer written 3.5 years ago by Bontus • 80
0
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1
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1.7k
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1
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How to interpret gene-FDR plots
fdr false discovery rate cssam written 4.0 years ago by r.monil • 0 • updated 3.9 years ago by Irsan • 6.8k
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1.4k
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2
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Concerning FDR calculation using Limma
agilent fdr microarray limma written 3.9 years ago by sebastien200109 • 0
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1
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1.0k
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1
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MACS: overalll expected FDR?
macs fdr written 4.0 years ago by linuxjoga • 0 • updated 4.0 years ago by Ming Tang • 2.5k
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1
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1.8k
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1
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using fdr to gate values in NGS comparison ttest
fdr unadjusted p-value ngs written 4.9 years ago by BarristanTheBold • 0 • updated 4.9 years ago by Devon Ryan ♦ 90k
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