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eCLIP peak calling
macs peak calling clip galaxy written 10 weeks ago by GiusiG • 0 • updated 9 days ago by Ashley • 40
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184
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How do you use MultiQC on FastQC files taken from SRA files?
sra galaxy fastq-dump multiqc fastqc written 5 weeks ago by beneopp • 0 • updated 5 weeks ago by Phil Ewels • 150
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8 follow
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How to convert NGS .tabular file to excel file?
format tabular galaxy excel rna-seq written 3 months ago by Glory Basumata • 10 • updated 8 weeks ago by writetoroopali • 0
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108
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Database not showing when running BLAST+ on Galaxy
galaxy sequence blastx blast written 11 weeks ago by chrismanuel1993 • 0
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258
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Galaxy differential expression starting from raw FASTQ files
galaxy rna-seq differential expression written 3 months ago by english.server • 120 • updated 3 months ago by genomax ♦ 60k
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Forum: I'm currently in my second year of my phd, I'm intrested to develop somthing for galaxy server
workflow galaxy forum written 3 months ago by dego999 • 0 • updated 3 months ago by Medhat ♦ 8.1k
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What is the advantage of variant calling using RNA-seq technique?
variant calling galaxy rna-seq written 7 months ago by akilabioinfo • 0 • updated 3 months ago by jpuntomarcos • 20
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News: Galaxy Administrator Training, January 28 - February 1, Penn State University
event news galaxy training written 3 months ago by Dave Clements • 610
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5 follow
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How Do I Get The Gene Names From The Chromosome Locations In A Wig File
wiggle galaxy coordinates ucsc written 8.7 years ago by pixie@bioinfo • 1.3k • updated 4 months ago by RamRS ♦ 20k
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140
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How do I read a logfile?
next-gen galaxy logfile bash written 4 months ago by c.clarido • 40 • updated 4 months ago by Devon Ryan ♦ 87k
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288
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1
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deepTools2: compute matrix error
software error deeptools galaxy written 4 months ago by dabates06 • 0 • updated 4 months ago by Devon Ryan ♦ 87k
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1
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293
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What is the difference between Bioconda and Galaxy?
bioconda galaxy bioinformatics tools written 5 months ago by Chen • 760 • updated 5 months ago by Friederike ♦ 2.4k
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Cufflinks: ImportError: No module named bx.intervals.io
software error galaxy cufflinks rna-seq written 6 months ago by Garen • 0 • updated 6 months ago by Devon Ryan ♦ 87k
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212
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Installing tools on Local Galaxy with Tool Shed not working
toolshed galaxy written 6 months ago by daianagan • 10
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Running Galaxy tools locally using bx-python
maf galaxy stitch maf blocks bx-python written 3.0 years ago by Thomas • 90 • updated 6 months ago by Biostar ♦♦ 20
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198
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count and compare microRNA expression value in RNA-Seq data on Galaxy
fastq galaxy rna-seq microrna dge written 7 months ago by lkianmehr • 30
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why genome format is unspecified in Galaxy server?
ftp galaxy rna-seq written 7 months ago by lkianmehr • 30 • updated 7 months ago by Devon Ryan ♦ 87k
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259
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What value shoould be filled at Choose Adapter Clip adapter sequences Galaxy
adapter galaxy clip choose adapter written 7 months ago by Kian • 40 • updated 7 months ago by Devon Ryan ♦ 87k
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432
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Galaxy tutorial on rnaseq
galaxy rna-seq written 7 months ago by kudzu • 0 • updated 7 months ago by Jennifer Hillman Jackson • 370
2
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1
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386
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1
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How do I filter out transcripts with less than two exons
bedtools bed gff galaxy written 7 months ago by alex.v.nesta • 0 • updated 7 months ago by cpad0112 ♦ 10k
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321
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Galaxy tool for quantifying RNAseq data
quantification galaxy rna-seq written 7 months ago by kml • 20
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Differential gene expression results are different while using hg19 and hg38 genomic assembly
stringtie galaxy featurecounts cufflink rna-seq written 7 months ago by akilabioinfo • 0 • updated 7 months ago by Devon Ryan ♦ 87k
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285
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Low % of aligned reads
alignment galaxy rna-seq bowtie written 8 months ago by kml • 20 • updated 8 months ago by Vijay Lakhujani ♦ 3.5k
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460
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Galaxy for RNASEQ CHIPSeq analysis
galaxy written 13 months ago by clizama • 0 • updated 8 months ago by leninchrist98 • 0
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Change XLOC to FBtr, FBgn or any other ID that can go through DAVID
galaxy xloc id conversion written 8 months ago by Sepd • 0
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364
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Creating a Bowtie2 Index for S.Purpuratus to use in Galaxy
bowtie2 galaxy reference genome bowtie alignment written 8 months ago by alice_pieplow • 0 • updated 8 months ago by genomax ♦ 60k
4
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909
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6 follow
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bam file to .bedgraph
genome R galaxy chip-seq rna-seq written 8 months ago by praveenhcu131 • 0 • updated 8 months ago by arup • 720
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News: April Galaxy News: UseGalaxy.org gets siblings; GCC Deadlines; GCCBOSC Childcare...
news galaxy events bosc written 9 months ago by Dave Clements • 610
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Problem with Prokka to run tbl2asn
galaxy prokka written 10 months ago by vmevada102 • 20 • updated 10 months ago by aaron.petkau • 0
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How to changing the Branding Title of Galaxy tools
galaxy written 10 months ago by vmevada102 • 20 • updated 10 months ago by Devon Ryan ♦ 87k
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