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eCLIP peak calling
macs peak calling clip galaxy written 13 days ago by GiusiG • 0
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Database not showing when running BLAST+ on Galaxy
galaxy sequence blastx blast written 20 days ago by chrismanuel1993 • 0
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1
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171
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1
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Galaxy differential expression starting from raw FASTQ files
galaxy rna-seq differential expression written 4 weeks ago by english.server • 80 • updated 4 weeks ago by genomax ♦ 58k
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205
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Forum: I'm currently in my second year of my phd, I'm intrested to develop somthing for galaxy server
workflow galaxy forum written 4 weeks ago by dego999 • 0 • updated 4 weeks ago by Medhat ♦ 8.0k
6
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6 follow
4
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What is the advantage of variant calling using RNA-seq technique?
variant calling galaxy rna-seq written 5 months ago by akilabioinfo • 0 • updated 4 weeks ago by jpuntomarcos • 10
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News: Galaxy Administrator Training, January 28 - February 1, Penn State University
event news galaxy training written 7 weeks ago by Dave Clements • 610
21
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3
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357
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7 follow
3
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How to convert NGS .tabular file to excel file?
format tabular galaxy excel rna-seq written 8 weeks ago by Glory Basumata • 10
20
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5 follow
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How Do I Get The Gene Names From The Chromosome Locations In A Wig File
wiggle galaxy coordinates ucsc written 8.5 years ago by pixie@bioinfo • 1.3k • updated 9 weeks ago by RamRS ♦ 19k
3
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1
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104
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1
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How do I read a logfile?
next-gen galaxy logfile bash written 9 weeks ago by c.clarido • 40 • updated 9 weeks ago by Devon Ryan ♦ 86k
1
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1
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211
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1
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deepTools2: compute matrix error
software error deeptools galaxy written 11 weeks ago by dabates06 • 0 • updated 11 weeks ago by Devon Ryan ♦ 86k
2
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1
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245
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1
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What is the difference between Bioconda and Galaxy?
bioconda galaxy bioinformatics tools written 3 months ago by Chen • 740 • updated 3 months ago by Friederike • 2.3k
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201
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1
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Cufflinks: ImportError: No module named bx.intervals.io
software error galaxy cufflinks rna-seq written 3 months ago by Garen • 0 • updated 3 months ago by Devon Ryan ♦ 86k
1
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164
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Installing tools on Local Galaxy with Tool Shed not working
toolshed galaxy written 4 months ago by daianagan • 10
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Running Galaxy tools locally using bx-python
maf galaxy stitch maf blocks bx-python written 2.9 years ago by Thomas • 90 • updated 4 months ago by Biostar ♦♦ 20
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count and compare microRNA expression value in RNA-Seq data on Galaxy
fastq galaxy rna-seq microrna dge written 4 months ago by lkianmehr • 30
1
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answer
141
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why genome format is unspecified in Galaxy server?
ftp galaxy rna-seq written 5 months ago by lkianmehr • 30 • updated 5 months ago by Devon Ryan ♦ 86k
0
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1
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212
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1
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What value shoould be filled at Choose Adapter Clip adapter sequences Galaxy
adapter galaxy clip choose adapter written 5 months ago by Kian • 40 • updated 5 months ago by Devon Ryan ♦ 86k
1
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1
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319
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1
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Galaxy tutorial on rnaseq
galaxy rna-seq written 5 months ago by kudzu • 0 • updated 5 months ago by Jennifer Hillman Jackson • 350
2
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1
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311
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1
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How do I filter out transcripts with less than two exons
bedtools bed gff galaxy written 5 months ago by alex.v.nesta • 0 • updated 5 months ago by cpad0112 • 9.9k
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1
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278
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Galaxy tool for quantifying RNAseq data
quantification galaxy rna-seq written 5 months ago by kml • 20
2
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1
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263
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1
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Differential gene expression results are different while using hg19 and hg38 genomic assembly
stringtie galaxy featurecounts cufflink rna-seq written 5 months ago by akilabioinfo • 0 • updated 5 months ago by Devon Ryan ♦ 86k
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Low % of aligned reads
alignment galaxy rna-seq bowtie written 6 months ago by kml • 20 • updated 6 months ago by Vijay Lakhujani ♦ 3.1k
0
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423
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Galaxy for RNASEQ CHIPSeq analysis
galaxy written 11 months ago by clizama • 0 • updated 6 months ago by leninchrist98 • 0
0
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165
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Change XLOC to FBtr, FBgn or any other ID that can go through DAVID
galaxy xloc id conversion written 6 months ago by Sepd • 0
2
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1
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267
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1
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Creating a Bowtie2 Index for S.Purpuratus to use in Galaxy
bowtie2 galaxy reference genome bowtie alignment written 6 months ago by alice_pieplow • 0 • updated 6 months ago by genomax ♦ 58k
4
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4
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718
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6 follow
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bam file to .bedgraph
genome R galaxy chip-seq rna-seq written 6 months ago by praveenhcu131 • 0 • updated 6 months ago by arup • 640
2
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219
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News: April Galaxy News: UseGalaxy.org gets siblings; GCC Deadlines; GCCBOSC Childcare...
news galaxy events bosc written 7 months ago by Dave Clements • 610
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2
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957
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2
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Problem with Prokka to run tbl2asn
galaxy prokka written 8 months ago by vmevada102 • 20 • updated 8 months ago by aaron.petkau • 0
1
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320
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1
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How to changing the Branding Title of Galaxy tools
galaxy written 8 months ago by vmevada102 • 20 • updated 8 months ago by Devon Ryan ♦ 86k
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238
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Detection of SNP for different disorders using galaxy.
galaxy snp written 8 months ago by dharshank.1096 • 20
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