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Recent Replies
Comment: NGS forensics: how to know if data is fabricated
by
dsull
★
5.9k
I don't think people have undertaken the effort to create an anomaly detector for RNAseq -- people's efforts are dedicated towards developi…
Comment: NGS forensics: how to know if data is fabricated
by
dsull
★
5.9k
I'd say post on pubpeer -- it's the best forum for this sort of discussion.
As for what additional analysis I recommend: I'd say look at s…
Comment: NGS forensics: how to know if data is fabricated
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noodle
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> This is a super-interesting question from an algorithmic standpoint
Ya, I was hoping to find some algorithm that would compare say a 're…
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Francesco
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Thank you for your valuable suggestion!
Comment: NGS forensics: how to know if data is fabricated
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noodle
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> My first question would be how strong your background in such analysis
> is.
Very strong. PhD+several years working in the field.
> Wot…
Comment: NGS forensics: how to know if data is fabricated
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ATpoint
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My first question would be how strong your background in such analysis is. Claim of fabrication is very serious, so be 100% sure to back it…
Answer: NGS forensics: how to know if data is fabricated
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This is a super-interesting question from an algorithmic standpoint (devising a model that can distinguish real from synthetic reads) but I…
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[seqmagick](https://github.com/fhcrc/seqmagick/) has a `--squeeze-threshold` option that does just this. For example with an MSA of five s…
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Use the standalone version of Nextflow and specify the process-specific conda environments paths.
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