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126 results • Page
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Herald:
The Biostar Herald for Monday, April 17, 2023
herald
13 months ago by
Biostar
2.7k
1
vote
0
replies
611
views
Herald:
The Biostar Herald for Monday, June 13, 2022
herald
23 months ago by
Biostar
2.7k
1
vote
0
replies
724
views
Herald:
The Biostar Herald for Wednesday, February 15, 2023
herald
15 months ago by
Biostar
2.7k
1
vote
0
replies
566
views
Herald:
The Biostar Herald for Thursday, July 07, 2022
herald
22 months ago by
Biostar
2.7k
1
vote
0
replies
614
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Herald:
The Biostar Herald for Thursday, August 24, 2023
herald
8 months ago by
Biostar
2.7k
1
vote
0
replies
535
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Herald:
The Biostar Herald for Monday, January 17, 2022
herald
2.3 years ago by
Biostar
2.7k
1
vote
0
replies
646
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Herald:
The Biostar Herald for Tuesday, October 05, 2021
herald
2.6 years ago by
Biostar
2.7k
1
vote
1
reply
740
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Herald:
The Biostar Herald for Monday, January 03, 2022
herald
updated 2.4 years ago by
Jeremy Leipzig
22k • written 2.4 years ago by
Biostar
2.7k
1
vote
0
replies
298
views
Herald:
The Biostar Herald for Monday, January 15, 2024
herald
3 months ago by
Biostar
2.7k
1
vote
0
replies
671
views
Herald:
The Biostar Herald for Monday, September 12, 2022
herald
20 months ago by
Biostar
2.7k
1
vote
0
replies
534
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Herald:
The Biostar Herald for Monday, July 11, 2022
herald
22 months ago by
Biostar
2.7k
1
vote
0
replies
641
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Herald:
The Biostar Herald for Monday, November 01, 2021
herald
2.5 years ago by
Biostar
2.7k
1
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0
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567
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Herald:
The Biostar Herald for Monday, February 14, 2022
herald
2.2 years ago by
Biostar
2.7k
1
vote
0
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844
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Herald:
The Biostar Herald for Tuesday, May 23, 2023
herald
11 months ago by
Biostar
2.7k
1
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0
replies
607
views
Herald:
The Biostar Herald for Monday, January 23, 2023
herald
15 months ago by
Biostar
2.7k
1
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0
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293
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Herald:
The Biostar Herald for Wednesday, January 31, 2024
herald
3 months ago by
Biostar
2.7k
1
vote
0
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806
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Herald:
The Biostar Herald for Wednesday, August 02, 2023
herald
9 months ago by
Biostar
2.7k
1
vote
0
replies
498
views
Herald:
The Biostar Herald for Wednesday, March 09, 2022
herald
2.2 years ago by
Biostar
2.7k
1
vote
0
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540
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Herald:
The Biostar Herald for Thursday, April 28, 2022
herald
2.0 years ago by
Biostar
2.7k
0
votes
0
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661
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Herald:
The Biostar Herald for Friday, August 27, 2021
herald
2.7 years ago by
Biostar
2.7k
0
votes
0
replies
567
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Herald:
The Biostar Herald for Monday, July 12, 2021
herald
2.8 years ago by
Biostar
2.7k
0
votes
0
replies
77
views
Herald:
The Biostar Herald for Monday, May 13, 2024
herald
16 hours ago by
Biostar
2.7k
0
votes
0
replies
627
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Herald:
The Biostar Herald for Tuesday, August 17, 2021
herald
2.7 years ago by
Biostar
2.7k
0
votes
0
replies
600
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Herald:
The Biostar Herald for Tuesday, August 03, 2021
herald
2.8 years ago by
Biostar
2.7k
0
votes
0
replies
620
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Herald:
The Biostar Herald for Tuesday, September 14, 2021
herald
2.7 years ago by
Biostar
2.7k
0
votes
0
replies
624
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Herald:
The Biostar Herald for Monday, July 26, 2021
herald
2.8 years ago by
Biostar
2.7k
126 results • Page
3 of 3
Recent Votes
Answer: Is there any way to modify this pie chart ?
Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
A: How can I convert -log10 (p-value) to p-value?
Comment: What does the 'E%' represent in BUSCO results?
Answer: What does the 'E%' represent in BUSCO results?
Answer: Combine Two Affymetrix Datasets With Same Platform
Comment: Kraken2 database
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Recent Replies
Answer: Overlapping Ranges within Granges object
by
Alex Reynolds
35k
If you're not tied to Granges, you could use `bedmap --fraction-both 0.1` to require at least 10% overlap between reference and map regions…
Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
by
Vijith
▴ 30
By doing some online search, I tried installing one module `cpan Bio::DB::Fasta` and it is running like a never-ending installation process…
Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
by
Vijith
▴ 30
I have tried installing AGAT. But it failed the tests. …
Comment: BWA alignment
by
ATpoint
82k
That is not what the logs above tell, but good you solved it.
Answer: Inquiry about deseq2 transformation
by
ATpoint
82k
The transformations first correct for sequencing depth (and [composition][1]) and then apply the variance stabilization / regularization. N…
Answer: The total expressed genes in RNA-Seq data
by
ATpoint
82k
There is no robust definition of "expressed" genes, this has been asked many times before. edgeR doesn't care about "expressed", it cares (…
Answer: What is the bin size for Bamcompare?
by
ATpoint
82k
It is the number of adjacent bases that are aggregated (binned) into a single value. I find binning not optimal, and would always set this …
Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
by
Pierre Lindenbaum
161k
see VQSR https://gatk.broadinstitute.org/hc/en-us/articles/360035531612-Variant-Quality-Score-Recalibration-VQSR and https://gatk.broadinst…
Comment: Snakemake wrapper issue
by
Matvii Mykhailichenko
• 0
Hi, I kind of did and kind of didn't: I stopped trying to use snakemake( I remember that it's a lot of hustle to install pickard, maybe you…
Answer: Is there any way to modify this pie chart ?
by
marco.barr
▴ 110
Hi, you can add the labels outside chart using `geom_label_repel` from `ggrepel` package. Check out this guide [https://r-charts.com/part…
Answer: Snakemake wrapper issue
by
Wei-Chen Pan
• 0
Hi, did you solve your problem ? I also encounter same issue but it's `wrapper:"v3.9.0/bio/picard/mergevcfs"`. In my log file, it said:…
Comment: What does the 'E%' represent in BUSCO results?
by
Philipp Bayer
8.5k
No worries! I found the commit with the maths too: https://gitlab.com/ezlab/busco/-/blame/master/src/busco/busco_tools/hmmer.py?page=2#L135…
Comment: What does the 'E%' represent in BUSCO results?
by
林明德
• 0
Thank you for your answer! It really helped me resolve a doubt!
Answer: What does the 'E%' represent in BUSCO results?
by
Philipp Bayer
8.5k
Ah your edit solved this. 50 BUSCOs contain internal stop codons, indicating they might be erroneous gene models, or the genes themselves a…
Answer: MGLTools does not work in windows 11
by
Ashfaq
• 0
In my case, I did not see iGPU. There is only one option, Intel UHD Graphics. What I need to do?
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