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Normal Samples From ICGC
icgc normal_samples written 13 days ago by David_emir • 310
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how to download ICGC germline mutation data?
icgc germline written 16 days ago by sxs870917 • 0 • updated 16 days ago by genomax ♦ 62k
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Downloding only RNA-Seq Raw counts data from ICGC
icgc raw counts written 5 weeks ago by David_emir • 310
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Downloading RNA-Seq Raw Count data form ICGC
icgc raw_data rna-seq written 5 weeks ago by David_emir • 310
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Data retrieval icgc
icgc r-package written 2.0 years ago by anshupa.vssut • 50 • updated 8 weeks ago by dodausp • 110
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Does anybody success to download data using icgc-storage-client ?
data icgc download written 3.0 years ago by sacha • 1.6k • updated 4 months ago by RamRS ♦ 20k
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Downloading triple negative breast cancer data from ICGC
icgc rna-seq written 6 months ago by graeme.thorn • 30
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icgc gene expression data
icgc written 10 months ago by Pappu • 1.9k
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62 follow
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Tutorial: Exploring cancer mutation data portals
data portal icgc cancer tutorial tcga mutation written 4.7 years ago by Malachi Griffith ♦ 17k
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Blacklist and greylist in PCAWG
icgc tcga pcawg written 14 months ago by shiyang93 • 50
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Downloading controlled access data from ICGC for specific ID?
icgc rna-seq written 18 months ago by ivivek_ngs • 4.6k
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ICGC/TCGA clinical data. Specimen_interval longer than donor survival time?
icgc tcga survival analysis specimen time written 3.9 years ago by mjt.professional • 0 • updated 18 months ago by Biostar ♦♦ 20
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ICGC exp_array data double measurements?
duplicates icgc expression written 18 months ago by pulyakhina • 20
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ICGC file ids
data icgc wgs written 19 months ago by zoharm • 0
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`chromosome_strand` all change to `1`
icgc awk written 19 months ago by wangshx • 10
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How to understand somatic mutation of ICGC data
genome icgc somatic mutation written 21 months ago by wangshx • 10 • updated 21 months ago by solo7773 • 70
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How to download a whole ICGC release of processed data?
icgc download written 2.1 years ago by Michael Schubert • 6.9k
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Variant allele frequency in TCGA and ICGC
genome vcf icgc tcga maf written 3.4 years ago by Maarten Slagter • 90 • updated 2.2 years ago by Biostar ♦♦ 20
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Using 2 different references in my pipeline
genome icgc next-gen written 2.3 years ago by michal.devir • 0 • updated 2.3 years ago by igor ♦ 7.3k
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GL000201,GL000202... etc What are these?
wgs icgc bam written 2.8 years ago by morovatunc • 400 • updated 2.8 years ago by igor ♦ 7.3k
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How to get annotation of miRNAs expression from ICGC ?
icgc rna-seq mirna written 2.9 years ago by jack • 740 • updated 2.8 years ago by Biostar ♦♦ 20
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Download ICGC gene expression data
icgc gene expression download cancer written 2.9 years ago by lkmklsmn • 860 • updated 2.9 years ago by zlira • 80
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ICGC Variant Calling Pipelines
icgc mutation calling written 3.0 years ago by morovatunc • 400 • updated 3.0 years ago by ivivek_ngs • 4.6k
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ICGC data ontology
mage-tab icgc sdrf written 3.3 years ago by Maarten Slagter • 90 • updated 3.2 years ago by Biostar ♦♦ 20
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900
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AND filter in ICGC data portal?
data portal icgc restful http written 3.3 years ago by Maarten Slagter • 90
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Microarray data analysis
gene log ratio gene expression microarray icgc written 3.5 years ago by maki.dur • 0 • updated 3.5 years ago by vivekbhr • 510
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TCGA/ICGC do not match raw count expression data
tcga icgc gene expression rna-seq written 3.5 years ago by zamalloa • 20
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which database to prefer for creating NGS Disease related Panels?
ngs panel icgc tcga cosmic written 3.6 years ago by gskbioinfo143 • 50
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Quality scores in ICGC simple somatic mutation file
simple somatic mutation icgc quality score written 3.8 years ago by tralynca • 40 • updated 3.7 years ago by Ying W • 3.9k
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How to calculate aneuploidy across TCGA / ICGC tumor samples
aneuploidy tumor icgc tcga somatic written 3.9 years ago by mrgraeme • 20 • updated 3.8 years ago by Sean Davis ♦ 25k
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