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censoring time for ICGC records with no followup or date of death?
icgc survival cancer written 6 weeks ago by mk • 110
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ICGC mRNA sequencing data: where is the documentation on analysis_id?
icgc rna-seq written 7 weeks ago by mk • 110
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429
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How to download advance search results from ICGC data portal?
icgc mutation icgcdcc written 15 months ago by Boboboe • 30 • updated 11 months ago by linoy.tsaban • 0
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1.8k
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ICGC data ontology
mage-tab icgc sdrf written 4.8 years ago by Maarten Slagter • 110 • updated 13 months ago by Biostar ♦♦ 20
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1
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485
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1
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Normal Samples From ICGC
icgc normal_samples written 18 months ago by David_emir • 370
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how to download ICGC germline mutation data?
icgc germline written 18 months ago by sxs870917 • 0 • updated 18 months ago by genomax ♦ 87k
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Downloding only RNA-Seq Raw counts data from ICGC
icgc raw counts written 19 months ago by David_emir • 370
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840
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Downloading RNA-Seq Raw Count data form ICGC
icgc raw_data rna-seq written 19 months ago by David_emir • 370
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1
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1.7k
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5 follow
1
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Data retrieval icgc
icgc r-package written 3.5 years ago by anshupa.vssut • 50 • updated 19 months ago by dodausp • 140
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Does anybody success to download data using icgc-storage-client ?
data icgc download written 4.5 years ago by sacha • 1.9k • updated 22 months ago by RamRS ♦ 28k
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Downloading triple negative breast cancer data from ICGC
icgc rna-seq written 24 months ago by graeme.thorn • 50
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icgc gene expression data
icgc written 2.4 years ago by Pappu • 1.9k
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10k
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65 follow
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Tutorial: Exploring cancer mutation data portals
data portal icgc cancer tutorial tcga mutation written 6.2 years ago by Malachi Griffith ♦ 18k
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752
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Blacklist and greylist in PCAWG
icgc tcga pcawg written 2.6 years ago by shiyang93 • 60
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841
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Downloading controlled access data from ICGC for specific ID?
icgc rna-seq written 3.0 years ago by ivivek_ngs • 5.0k
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ICGC/TCGA clinical data. Specimen_interval longer than donor survival time?
icgc tcga survival analysis specimen time written 5.4 years ago by mjt.professional • 0 • updated 3.0 years ago by Biostar ♦♦ 20
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763
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ICGC exp_array data double measurements?
duplicates icgc expression written 3.0 years ago by pulyakhina • 20
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1.0k
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ICGC file ids
data icgc wgs written 3.0 years ago by zoharm • 0
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688
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`chromosome_strand` all change to `1`
icgc awk written 3.1 years ago by wangshx • 10
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1
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1.7k
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1
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How to understand somatic mutation of ICGC data
genome icgc somatic mutation written 3.2 years ago by wangshx • 10 • updated 3.2 years ago by solo7773 • 70
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1
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How to download a whole ICGC release of processed data?
icgc download written 3.6 years ago by Michael Schubert • 7.0k
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Variant allele frequency in TCGA and ICGC
genome vcf icgc tcga maf written 4.8 years ago by Maarten Slagter • 110 • updated 3.7 years ago by Biostar ♦♦ 20
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Using 2 different references in my pipeline
genome icgc next-gen written 3.8 years ago by michal.devir • 0 • updated 3.8 years ago by igor ♦ 11k
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1
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GL000201,GL000202... etc What are these?
wgs icgc bam written 4.3 years ago by morovatunc • 460 • updated 4.3 years ago by igor ♦ 11k
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1.2k
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How to get annotation of miRNAs expression from ICGC ?
icgc rna-seq mirna written 4.4 years ago by jack • 810 • updated 4.3 years ago by Biostar ♦♦ 20
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Download ICGC gene expression data
icgc gene expression download cancer written 4.3 years ago by lkmklsmn • 930 • updated 4.3 years ago by zlira • 80
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ICGC Variant Calling Pipelines
icgc mutation calling written 4.4 years ago by morovatunc • 460 • updated 4.4 years ago by ivivek_ngs • 5.0k
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AND filter in ICGC data portal?
data portal icgc restful http written 4.8 years ago by Maarten Slagter • 110
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1
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1.2k
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1
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Microarray data analysis
gene log ratio gene expression microarray icgc written 4.9 years ago by maki.dur • 0 • updated 4.9 years ago by vivekbhr • 560
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TCGA/ICGC do not match raw count expression data
tcga icgc gene expression rna-seq written 5.0 years ago by zamalloa • 20
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