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Job: IBSE Post-bac and Post-doc Fellowships
post-bac post-doc healthcare systems-biology
updated 6 days ago by 39k • written 4.0 years ago by ▴ 10
0
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0
replies
592
views
Job: Postdoctoral position in computational biology
genomics-data computational-biology
updated 21 hours ago by 39k • written 3.5 years ago by • 0
0
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0
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1.3k
views
Job: Database Architect and Developer, Inscripta, Boulder, CO/Pleasanton CA USA
database-architect NGS database-curation
updated 6 days ago by 39k • written 4.0 years ago by • 0
1
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0
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995
views
Job: Senior Informatician - Oxford
genome
updated 6 days ago by 39k • written 4.0 years ago by ▴ 10
0
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0
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688
views
Job: Postdoctoral researcher position in DNA data storage
DNAstorage postdoc france
updated 1 day ago by 39k • written 3.7 years ago by ▴ 10
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0
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1.3k
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Job: Bioinformatics Analyst II, Genomics Shared Resource
seattle
updated 6 days ago by 39k • written 4.0 years ago by ▴ 10
1
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1.5k
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Job: Bioinformatics PhD position in Next Generation Sequencing analysis
metagenomics illumina minion
updated 5 days ago by 39k • written 3.9 years ago by 4.9k
0
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0
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968
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Job: Part-time postdoc in Cancer Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
biomarkers cancer bioinformatician
updated 21 hours ago by 39k • written 3.5 years ago by ▴ 120
0
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0
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839
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Job: PhD Position in Statistical Phylogenetics (Modeling Species Diversification)
modeling Bayesian-statistics phylogenetics
updated 4 days ago by 39k • written 3.8 years ago by ▴ 10
0
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0
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670
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Job: postdoc on Computational Evolutionary Genomics and Ecology of the Microbiome. Madrid, Spain.
postdoc evolution genomics
updated 20 hours ago by 39k • written 3.5 years ago by ▴ 140
2
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0
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1.3k
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Job: Seeking bioinformaticians and data engineers for product research study
RNA-Seq cwl aws workflows
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
0
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0
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2.1k
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Job: Certified Genetic Counselor [Full-Time]
genome RNA-Seq next-gen Genetic-Counselor
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
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0
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975
views
Job: Ensembl Bioinformatics Developer
model-organisms ensembl genomics
updated 1 day ago by 39k • written 3.6 years ago by 23k
1
vote
0
replies
934
views
Job: Ensembl Regulation Developer
epigenetics Ensembl epigenomics
updated 5 days ago by 39k • written 3.9 years ago by 23k
0
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0
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195
views
Job: Postdoctoral Research Associate in bio-ontologies and machine learning (Imageomics)
Machine-Learning PostDoc Data-Science Biology Ontology
updated 4 days ago by 39k • written 4 days ago by • 0
0
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0
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1.4k
views
Job: American Museum of Natural History Postdoctoral Fellowships in Bioinformatics and Computational Biology
human-health biomedicine
updated 1 day ago by 39k • written 3.6 years ago by ▴ 20
0
votes
0
replies
1.2k
views
Job: Postdoc position in machine learning and variation interpretation
postdoc machine-learning
updated 22 hours ago by 39k • written 3.6 years ago by ▴ 10
0
votes
0
replies
973
views
Job: PhD candidate position in Computational Biology and Gene Regulation
Genomics Gene-regulation DNA-methylation
updated 1 day ago by 39k • written 3.6 years ago by ▴ 890
0
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0
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969
views
Job: Post-doctoral Fellowship at BC Cancer Research Center, Vancouver BC
genome RNA Single-Cell sequencing
updated 5 days ago by 39k • written 3.9 years ago by • 0
0
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0
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1.0k
views
Job: Senior Bioinformaticians x 4- Tree of Life
flexible-working Python sequencing-data
updated 1 day ago by 39k • written 3.6 years ago by ▴ 230
0
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0
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823
views
Job: Postdoc in Bioinformatics and Computational Genomics (Minnesota, USA)
sequence genome RNA-Seq next-gen
updated 4 days ago by 39k • written 3.8 years ago by ▴ 20
0
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0
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1.0k
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Job: Postdoctoral researcher: Infrastructure development for nanomaterial risk assessment
nanotechnology ontology systems-biology
updated 21 hours ago by 39k • written 3.5 years ago by 5.4k
1
vote
0
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950
views
Job: Data scientist position in biomedical machine learning and high-performance computing, Icahn School of Medicine at Mount Sinai, NYC, US
Machine-learning
updated 6 days ago by 39k • written 4.0 years ago by ▴ 190
0
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0
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1.2k
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Job: Postdoctoral Position / Computational Scientist position - UT Southwestern, Dallas, TX, USA
computational genome
updated 1 day ago by 39k • written 3.6 years ago by • 0
0
votes
0
replies
1.3k
views
Job: Looking a single-cell RNA-seq analysis PhD position /job
single-cell-RNA
updated 4 days ago by 39k • written 3.8 years ago by ▴ 10
0
votes
0
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809
views
Job: Post-doctoral Fellow - Aparicio Lab @ BC Cancer Research Center, Vancouver BC Canada
genome single-cell cancer sequencing
updated 6 days ago by 39k • written 4.0 years ago by • 0
1
vote
0
replies
1.3k
views
Job: Variant Analyst-Genomics at UAB, Birmingham, Alabama
variant-analyst exome disease genomics
updated 1 day ago by 39k • written 3.7 years ago by ▴ 10
0
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0
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984
views
Job: Post-doc Researchers in Computer Science and Bioinformatics (R2)
snp
updated 6 days ago by 39k • written 3.9 years ago by ▴ 20
0
votes
0
replies
1.2k
views
Job: Bioinformatician post at Wellcome Centre for Cell Biology Edinburgh
developer
updated 5 days ago by 39k • written 3.9 years ago by • 0
1
vote
0
replies
549
views
Job: Statistician/Bioinformatician at the ICR, Sutton, UK
ngs
updated 4 days ago by 39k • written 3.8 years ago by 11k
0
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0
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617
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Job: RSE and Bioinformatics positions for the University of Melbourne for Cancer Research
rse
updated 6 days ago by 39k • written 4.0 years ago by ▴ 610
0
votes
0
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1.4k
views
Job: Bioinformatician / Biostatistician (Gladstone Institutes - San Francisco, CA)
UCSF Statistics RNA-Seq next-gen
updated 5 days ago by 39k • written 3.9 years ago by ▴ 960
1
vote
0
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726
views
Job: Computational Biologist at the Institute of Metabolic Science, University of Cambridge (UK)
Computattional-Biologist University-of-Cambridge
updated 6 days ago by 39k • written 4.0 years ago by ▴ 20
0
votes
0
replies
1.2k
views
Job: Bioinformatics Scientist - BC Cancer Research Center, Vancouver, BC
software genomics
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
votes
0
replies
1.4k
views
Job: Data Scientist Outreach Coordinator at Computercraft (NCBI/NIH) in Bethesda, MD
outreach hackathon code-a-thon
updated 19 hours ago by 39k • written 3.5 years ago by ▴ 90
0
votes
0
replies
1.3k
views
Job: Data scientist position in biomedical machine learning and high-performance computing
machine-learning hpc
updated 5 days ago by 39k • written 3.9 years ago by ▴ 190
0
votes
0
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963
views
Job: PostDoc in Computational Genomics (St.Petersburg, Russia)
R machine-learning genomics
updated 1 day ago by 39k • written 3.6 years ago by ▴ 70
0
votes
0
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1.5k
views
Job: PhD Student position in Systems Biology and Bioinformatics @ UAB (Birmingham, AL)
Networks data-analysis RNA-Seq
updated 4 days ago by 39k • written 3.8 years ago by • 0
0
votes
0
replies
899
views
Job: multiple positions open at Nevada Institute of Personalized Medicine.
postdoc assistant-professor
updated 1 day ago by 39k • written 3.6 years ago by ▴ 10
1
vote
0
replies
1.0k
views
Job: Bioinformatician - Databiology
bioinformatician
updated 4 days ago by 39k • written 3.7 years ago by 13k
0
votes
0
replies
1.1k
views
Job: MOLECULAR CARDIOLOGY/BIOINFORMATICS - Research Associate, Graduate Student, or Postdoc
Research-Associate Postdoc Graduate-student
updated 4 days ago by 39k • written 3.8 years ago by • 0
0
votes
0
replies
74
views
Job: Associate Professor, Ecology
Ecology
updated 14 hours ago by 39k • written 14 hours ago by ▴ 20
0
votes
0
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1.2k
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Job: Bioinformatician: NEW YORK CITY - Institute for Data Science and Genomic Technology, Mount Sinai School of Medicine
microbiome bioinformatician systems-biology
updated 1 day ago by 39k • written 3.6 years ago by ▴ 30
0
votes
0
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263
views
Job: Senior Bioinformatics Research Scientistt/Bioinformatics Research Scientist-Epigenetics(USA, Memphis, TN, St. Jude Children's Research Hospital)
Tennessee Hospital Epigenetics Memphis
5 days ago by xubeisi ▴ 30
0
votes
0
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1.2k
views
Job: Computational Genomics postdoc at NCBI, NIH. Bethesda, MD, USA.
deep-learning genomics
updated 1 day ago by 39k • written 3.6 years ago by ▴ 140
0
votes
0
replies
813
views
Job: Ensembl Web Back-end Project Leader
database web infrastructure ensembl
updated 1 day ago by 39k • written 3.6 years ago by 23k
0
votes
0
replies
1.3k
views
Job: Scientist (Computational Biology)
cancer-genomics next-gen R computational-biology
updated 19 hours ago by 39k • written 3.5 years ago by • 0
0
votes
0
replies
786
views
Job: Heidelberg, Germany: Computational scientists
post-doc scRNA-Seq PhD statistics
updated 5 days ago by 39k • written 3.9 years ago by ▴ 50
0
votes
0
replies
908
views
Job: Job vacancy at EMBL - Computational Biologist
computational-biologist
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
0
votes
0
replies
843
views
Job: Postdoc in Bioinformatics at the Department of Molecular Medicine (MOMA), Aarhus University
postdoc aarhus moma denmark
updated 1 day ago by 39k • written 3.6 years ago by ★ 2.9k
224 results • Page 2 of 5
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ChatGPT optimized for bioinformatics questions
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Answer: Extract sequences from a fastq file by a list of IDs
Answer: Extract sequences from a fastq file by a list of IDs
A: Collapse Repeated Reads
A: Extract Reads From A Bam File That Fall Within A Given Region
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes
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Comment: switching from illumination to NEB prep kits by GenoMax 129k
If you are simply replacing the library prep kit then it will be compatible with normal illumina libraries. If there is a different adapter…
Comment: How to use R installed by conda instead of it installed by apt on Ubuntu by Zhichao • 0
yes, I have activated this conda environment. And the conda is in `PATH` . At first, I create a new conda environment `conda create -n ne…
Comment: Limma returned only positive logFC values by ATpoint 72k
Raw counts, raw meaning not manipulated by any transformation. See limma and edgeR manual, it clearly covers that for using limma-trend and…
Comment: Alternative To interactions comparison in limma in DESeq2 by ATpoint 72k
https://support.bioconductor.org/p/9143932/ -- see the lower parts where Michael Love answers, it comes down to numeric contrasts.
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
The `mat` is log2-normalized raw data. Is it feasible? Or should I feed in counts?
Comment: DESeq2 for different design and normalized counts by ATpoint 72k
Nope, please read the manual of DESeq2, it clearly tells to use raw counts. What "normalized counts" do you have exactly? limma-trend might…
Comment: How to use R installed by conda instead of it installed by apt on Ubuntu by ATpoint 72k
Did you activate your conda environment? Is conda in `PATH`? Please describe what you did.
Comment: Limma returned only positive logFC values by ATpoint 72k
Bottom line is, if you are using an intercept-free model (that is what `~0+...` is doing) then you have to use contrasts. In a "normal" mod…
Comment: Asking for feedback on a Python library for computing alignments by Alexander ▴ 70
Thanks for sharing ! It seems there is a problem to install on Kaggle cloud (like a Colab): I tried several ways: https://www.kaggle.com/co…
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes by Darked89 4.4k
I am not sure what you gain by using hard masked genome for RNA-Seq mapping. There will be reads covering some introns. But if you mask rep…
Comment: Extract sequences from a fastq file by a list of IDs by mhpakdel96 • 0
Thanks a lot, it works
Comment: Differential protein expression analysis by dsull ★ 4.2k
I don't have a tutorial but see this paper I co-authored: https://pubs.acs.org/doi/abs/10.1021/acs.jproteome.0c00666 All of the upstream …
Comment: Differential protein expression analysis by Ribo ▴ 40
Thank you! Is there a recommended tutorial for proteomics analysis?
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
I clustered the samples into subtypes and am now comparing the differential expression across the subtypes.
Answer: Limma returned only positive logFC values by Gordon Smyth ★ 6.1k
No, your code isn't correct. You are testing one group mean equal to zero instead of testing for differences between two groups. I wonder w…
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