Showing: memereset
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Obtaining transcription factors from DNA consensus motif
meme motif tf transcription factors written 4.9 years ago by drautuna60 • updated 9 days ago by ATpoint19k
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147
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A question on MEME results
meme motif written 22 days ago by Hughie20
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Motif analysis in repeat-rich ChIP-seq data?
chip-seq meme motif written 9 weeks ago by robbuurstede0 • updated 8 weeks ago by simon.vanheeringen170
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Issue with replicating from a research paper-motifs
fasta rna meme sequence motif written 10 weeks ago by joshua.steier20 • updated 10 weeks ago by geek_y9.8k
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Converting motif databases from meme suite to other formats
meme format motif written 3 months ago by nanoide30 • updated 3 months ago by Alex Reynolds28k
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Motif discovery using MEME
meme motif conserved domain written 2.6 years ago by ####190 • updated 7 months ago by Biostar ♦♦ 20
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Meme-chip: How do I make my input sequences all the same length?
meme-chip meme sequences written 7 months ago by kdc1530 • updated 7 months ago by Alex Reynolds28k
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Parsing AME tsv file
ame tsv meme motif bed written 8 months ago by rbronste240
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How to convert MEME MOTIF to all potential sequences?
rna meme motif sequences written 9 months ago by Oo0 • updated 9 months ago by jared.andrews072.7k
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FIMO vs AME - true positive and false positives across search tools
ame fimo meme motif written 10 months ago by rbronste240 • updated 9 months ago by Biostar ♦♦ 20
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FIMO target coordinates in fasta file
fasta fimo meme motif written 18 months ago by rbronste240 • updated 14 months ago by ATpoint19k
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finds motif in long sequence using meme
meme bacteria motif written 14 months ago by shira.zaltsman10 • updated 14 months ago by Devon Ryan91k
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Fimo output for classes of TFs from specific database
fimo meme chip-seq written 14 months ago by rbronste240 • updated 14 months ago by Alex Reynolds28k
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Visualizing MEME results togeather with a Phylogenetic Tree
phylogeny domain meme protein motif written 14 months ago by venuraherath20 • updated 14 months ago by Sishuo Wang170
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 15 months ago by rbronste240 • updated 15 months ago by h.mon26k
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3
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FIMO output to bed
bedtools fimo meme bedops written 18 months ago by rbronste240 • updated 18 months ago by YaGalbi1.4k
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FIMO outputs only Chr1 hits
fimo meme motif written 18 months ago by rbronste240 • updated 18 months ago by Satyajeet Khare1.4k
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De-novo motif discovery and repeats
de novo fimo meme motif written 18 months ago by rbronste240 • updated 18 months ago by Alex Reynolds28k
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Meme-Tools: Bit score
meme alignment bit score written 21 months ago by chrys40 • updated 21 months ago by Alex Reynolds28k
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Eliminating repetetive motifs found by MEME
motif meme chip-seq written 22 months ago by rbronste240 • updated 22 months ago by Alex Reynolds28k
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