Showing: memereset
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Motif discovery using MEME
meme motif conserved domain written 2.2 years ago by ####180 • updated 3 months ago by Biostar ♦♦ 20
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Meme-chip: How do I make my input sequences all the same length?
meme-chip meme sequences written 3 months ago by kdc150 • updated 3 months ago by Alex Reynolds27k
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Parsing AME tsv file
ame tsv meme motif bed written 4 months ago by rbronste230
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How to convert MEME MOTIF to all potential sequences?
rna meme motif sequences written 5 months ago by Oo0 • updated 5 months ago by jared.andrews071.9k
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FIMO vs AME - true positive and false positives across search tools
ame fimo meme motif written 6 months ago by rbronste230 • updated 5 months ago by Biostar ♦♦ 20
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FIMO target coordinates in fasta file
fasta fimo meme motif written 14 months ago by rbronste230 • updated 9 months ago by ATpoint14k
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finds motif in long sequence using meme
meme bacteria motif written 10 months ago by shira.zaltsman10 • updated 10 months ago by Devon Ryan88k
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Fimo output for classes of TFs from specific database
fimo meme chip-seq written 10 months ago by rbronste230 • updated 10 months ago by Alex Reynolds27k
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Visualizing MEME results togeather with a Phylogenetic Tree
phylogeny domain meme protein motif written 10 months ago by venuraherath20 • updated 10 months ago by Sishuo Wang140
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 11 months ago by rbronste230 • updated 11 months ago by h.mon24k
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FIMO output to bed
bedtools fimo meme bedops written 14 months ago by rbronste230 • updated 14 months ago by YaGalbi1.4k
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FIMO outputs only Chr1 hits
fimo meme motif written 14 months ago by rbronste230 • updated 14 months ago by Satyajeet Khare1.3k
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De-novo motif discovery and repeats
de novo fimo meme motif written 14 months ago by rbronste230 • updated 14 months ago by Alex Reynolds27k
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Meme-Tools: Bit score
meme alignment bit score written 17 months ago by chrys40 • updated 17 months ago by Alex Reynolds27k
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Eliminating repetetive motifs found by MEME
motif meme chip-seq written 18 months ago by rbronste230 • updated 18 months ago by Alex Reynolds27k
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MEME motif width
chip-seq meme motif written 18 months ago by rbronste230
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Background letter frequencies
fimo meme motif written 21 months ago by sangram_keshari130
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Meme: What is the optimal sequence length?
fasta sequence meme length written 2.3 years ago by YaGalbi1.4k • updated 21 months ago by pythiest0
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meme mast for overlapping sequences
meme motif mast written 2.1 years ago by varsha61970
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