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<prev • 107 results • page 1 of 4 • next >
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Good Books/Resources to learn metagenomic analysis?
assembly metagenomics bacteria long reads nanopore written 15 hours ago by jimpinney • 10
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Big differences between two alignment tools outputs: BWA vs NanoPipe
alignment nanopipe bwa nanopore bam written 3 months ago by alexandru.bologa.marian • 0 • updated 3 days ago by Biostar ♦♦ 20
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Choice between Nanopore cDNA or direct RNA sequencing
cdna direct rna nanopore sequencing written 6 weeks ago by Macspider • 3.1k
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Tool for design of crRNA for Cas9 no amp enrichment (long read)
crrna cas9 pacbio nanopore written 7 weeks ago by Michael • 160
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NA match rate and high error rate with BBMap (mapPacBio)
match rate mappacbio bbmap nanopore written 9 weeks ago by elcombe.c • 0 • updated 8 weeks ago by Biostar ♦♦ 20
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Oxford Nanopore error rate?
rate nanopore oxford error written 14 months ago by stacy734 • 40 • updated 8 weeks ago by oneillkza • 100
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16s rna meta-genomics analysis
nanopore sequencing written 3 months ago by krushnach80 • 810 • updated 8 weeks ago by Biostar ♦♦ 20
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Bedtools genome coverage
bedtools genome coverage coverage nanopore genome written 10 weeks ago by sl16878 • 0 • updated 10 weeks ago by Pierre Lindenbaum ♦ 129k
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How to filter nanopore transcriptome alignments to trust 3' ends?
direct rna minimap2 nanopore written 10 weeks ago by josiegleeson1 • 0
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Assemble and get consensus of inserted sequence
assembly structural variant nanopore written 12 weeks ago by WouterDeCoster ♦ 44k
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Nanopore structural variant calling - more than 2 alleles on IGV track?
vcf nanopore structural variant igv written 7 months ago by BioinformaticsLad • 160 • updated 3 months ago by minalj365 • 0
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RNA-seq Nanopore and Illumina hybrid assembly to improve gene annotation
illumina rna-seq nanopore assembly written 3 months ago by nlehmann • 100 • updated 3 months ago by colindaven • 2.3k
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Sizes of Nanopore files and how to store?
wgs nanopore long-read written 4 months ago by Floris Brenk • 940 • updated 4 months ago by WouterDeCoster ♦ 44k
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GridION fastq ASSEMBLY
assembly fastq nanopore written 4 months ago by shira.zaltsman • 20
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Nanopore data decontamination
ont decontamination nanopore contamination written 6 months ago by Juke34 • 4.5k • updated 5 months ago by Biostar ♦♦ 20
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Tool: methplotlib: visualization and analysis of modified nucleotides from nanopore sequencing
methylation tool nanopore sequencing written 5 months ago by WouterDeCoster ♦ 44k
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UMI read consensus calling
umi next-gen unique molecular identifier nanopore written 6 months ago by SemiQuant • 70 • updated 6 months ago by i.sudbery ♦ 8.4k
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Modifying fastq base at specific reference location on different length reads
alignment next-gen sequence nanopore written 7 months ago by yryan • 0
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How to trim Nanopore reads. Please suggest a tool.
minionqc nanopore ont written 7 months ago by Sudosundu • 0 • updated 7 months ago by genomax ♦ 87k
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Job: Postdoc / PhD student comparative genomics / population genomics of plant pathogens, Munich Germany
assembly next-gen job nanopore R written 7 months ago by stam • 0
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News: Long-read nanopore Sequencing course
assembly long-reads software error news pacbio nanopore written 7 months ago by carlopecoraro2 • 1.8k
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Nanopore incomplete fragment sequencing
nanopore written 10 months ago by VHahaut • 1.1k • updated 7 months ago by Biostar ♦♦ 20
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How to extract all ONT reads that connect/overlaps two or more contigs ?
reads nanopore scaffolding overlaps written 2.4 years ago by BioGeek • 150 • updated 7 months ago by lagartija • 90
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News: Discovering the world of the Long-read nanopore Sequencing
assembly news nanopore pacbio sequencing written 8 months ago by carlopecoraro2 • 1.8k
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Nanopore hybrid assembly
next-gen nanopore sequencing written 8 months ago by ma23 • 40
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Best practices for counting genes with nanopore RNAseq data
alignment rna-seq nanopore written 18 months ago by Florian Bernard • 70 • updated 8 months ago by v.shapovalova1 • 10
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News: Course: GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
assembly news nanopore written 10 months ago by carlopecoraro2 • 1.8k
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News: Comparative Genomics course in October - last 2 places left
illumina news next-gen pacbio nanopore written 10 months ago by carlopecoraro2 • 1.8k
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Oxford Nanopore sequencing_summary.txt file description
nanopore sequencing written 12 months ago by anastasiia.satyr • 20 • updated 11 months ago by WouterDeCoster ♦ 44k
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Blast an organism against a downloaded database
ncbi blast databases nanopore written 11 months ago by caro-ca • 20 • updated 11 months ago by Mensur Dlakic • 6.0k
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