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<prev • 28 results • page 1 of 1 • next >
9
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Oxford Nanopore and Illumina hybrid assembly
assembly nanopore ont written 15 months ago by igor • 5.7k • updated 15 minutes ago by Carambakaracho • 130
1
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1
answer
167
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1
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long-range technologies for genome scaffolding
10x hi-c scaffolding nanopore optical maps written 10 weeks ago by yurybukhman • 10 • updated 12 days ago by Damian Kao ♦ 14k
1
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1
answer
103
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1
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test dataset for MinIon algorithm development
nanopore sequencing written 20 days ago by christacaggiano • 20 • updated 20 days ago by WouterDeCoster ♦ 27k
3
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1
answer
164
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1
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Nanopore data and downstream anlysis
nanopore written 5 weeks ago by MAPK • 1.2k • updated 5 weeks ago by WouterDeCoster ♦ 27k
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0
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117
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0
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How to extract all ONT reads that connect/overlaps two or more contigs ?
reads nanopore scaffolding overlaps written 6 weeks ago by BioGeek • 110
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0
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124
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0
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error using porechop on nanopore reads
porechop nanopore written 7 weeks ago by KVC_bioinfo • 310
0
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0
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191
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aligner for 1D^2 oxford nanopore data
minimap2 1d^2 nanopore written 7 weeks ago by KVC_bioinfo • 310
4
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1
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154
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1
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cutadapt vs porechop
porechop 1d^2 nanopore cutadapt written 7 weeks ago by KVC_bioinfo • 310 • updated 7 weeks ago by WouterDeCoster ♦ 27k
3
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1
answer
221
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1
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How to find alternative splicing isoforms in reads generated by nanopore sequencing experiment
nanopore long-reads rna-seq clustering sequencing written 7 weeks ago by Florian BERNARD • 20 • updated 7 weeks ago by jean.elbers • 160
4
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1
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203
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1
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look for sequences containing a specific motif
sequence clustalw nanopore blast rna-seq written 10 weeks ago by Florian BERNARD • 20 • updated 10 weeks ago by Alex Reynolds ♦ 23k
5
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1
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168
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1
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How to remove split/broken reads from bam file
minimap2 graphmap samtools split nanopore written 12 weeks ago by BioGeek • 110 • updated 12 weeks ago by Macspider • 2.3k
1
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0
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237
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Page: Collecting the articles about Oxford Nanopore Technology
page nanopore ont written 4 months ago by KVC_bioinfo • 310 • updated 4 months ago by genomax ♦ 46k
0
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1
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322
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1
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Chimeric alignment with minimap2
minimap2 chimeric nanopore written 4 months ago by Nicolas Rosewick • 6.2k • updated 4 months ago by Macspider • 2.3k
2
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0
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291
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0
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Detection of chimeric / fusion transcript using nanopore long reads
chimeric nanopore written 4 months ago by Nicolas Rosewick • 6.2k
3
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309
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0
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Job: PostDoc at Human Genome Sequencing Center at Baylor College of Medicine
pacbio next-gen job nanopore structural variation written 4 months ago by fritz.sedlazeck • 30
5
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1
answer
468
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1
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trimming nano pore reads based on quality score.
nanopore trim written 5 months ago by KVC_bioinfo • 310 • updated 5 months ago by WouterDeCoster ♦ 27k
6
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1
answer
326
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1
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Adapters fro nano pore sequence
adaptor nanopore written 5 months ago by KVC_bioinfo • 310
3
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1
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265
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1
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Removing adapters from Oxford nano pore reads
adaptors nanopore ont written 5 months ago by KVC_bioinfo • 310 • updated 5 months ago by WouterDeCoster ♦ 27k
0
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0
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289
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0
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Export reads from an alignment file
bwa samtools sam nanopore mapping written 5 months ago by elena.syp • 0
0
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0
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286
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0
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Identifying insertion of transposable element in a large plant genome, any recommendations on my situation?
k-mer illumina transposable element nanopore written 6 months ago by johnnytam100 • 30
0
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0
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291
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0
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Upcoming workshops tackling data analysis of hybrid sequencing technologies?
hybrid minion nanopore workshop sequencing written 8 months ago by Lina F • 110
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1
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300
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1
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Using long reads to find a combination of mutations
long reads nanopore snp variants written 9 months ago by eayasi • 0 • updated 9 months ago by colindaven • 600
2
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0
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464
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0
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Use kallisto with ONT (nanopore) cDNA long reads
long reads kallisto nanopore written 9 months ago by Nicolas Rosewick • 6.2k
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2
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564
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2
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Reads length Distribution of ONT reads and Error rate
reads distribution ngs error rate nanopore written 11 months ago by midox • 190 • updated 11 months ago by WouterDeCoster ♦ 27k
4
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1
answer
904
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1
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Fastx_toolkit with nanopore data
fasta fastq fastx nanopore written 15 months ago by glgowers • 10 • updated 15 months ago by Botond Sipos • 1.6k
5
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3
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816
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3
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BLAST: One read matches same region multiple times
blast nanopore written 2.1 years ago by godeludanu • 20 • updated 2.1 years ago by WouterDeCoster ♦ 27k
0
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1
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956
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1
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Align long nanopore minion cDNA reads
alignment long reads nanopore written 2.7 years ago by Nicolas Rosewick • 6.2k • updated 2.7 years ago by mark.ziemann • 1.0k
2
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Forum: Bioinformatics Hangout on Air demonstrating Oxford Nanopore data and analysis this Wednesday (10th Sept)
forum nanopore sequencing written 3.6 years ago by Daniel • 3.5k
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