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GridION fastq ASSEMBLY
assembly fastq nanopore written 2 days ago by shira.zaltsman • 20
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Nanopore data decontamination
ont decontamination nanopore contamination written 10 weeks ago by Juke-34 • 3.7k • updated 4 weeks ago by Biostar ♦♦ 20
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Tool: methplotlib: visualization and analysis of modified nucleotides from nanopore sequencing
methylation tool nanopore sequencing written 7 weeks ago by WouterDeCoster ♦ 43k
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UMI read consensus calling
umi next-gen unique molecular identifier nanopore written 9 weeks ago by SemiQuant • 70 • updated 9 weeks ago by i.sudbery ♦ 7.3k
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Modifying fastq base at specific reference location on different length reads
alignment next-gen sequence nanopore written 11 weeks ago by yryan • 0
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How to trim Nanopore reads. Please suggest a tool.
minionqc nanopore ont written 12 weeks ago by Sudosundu • 0 • updated 12 weeks ago by genomax ♦ 80k
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Job: Postdoc / PhD student comparative genomics / population genomics of plant pathogens, Munich Germany
assembly next-gen job nanopore R written 3 months ago by stam • 0
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Nanopore structural variant calling - more than 2 alleles on IGV track?
vcf nanopore structural variant igv written 3 months ago by BioinformaticsLad • 150
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News: Long-read nanopore Sequencing course
assembly long-reads software error news pacbio nanopore written 3 months ago by carlopecoraro2 • 1.5k
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Nanopore incomplete fragment sequencing
nanopore written 5 months ago by VHahaut • 1.1k • updated 3 months ago by Biostar ♦♦ 20
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How to extract all ONT reads that connect/overlaps two or more contigs ?
reads nanopore scaffolding overlaps written 2.1 years ago by BioGeek • 140 • updated 3 months ago by lagartija • 80
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News: Discovering the world of the Long-read nanopore Sequencing
assembly news nanopore pacbio sequencing written 3 months ago by carlopecoraro2 • 1.5k
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Nanopore hybrid assembly
next-gen nanopore sequencing written 3 months ago by ma23 • 40
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6 follow
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Best practices for counting genes with nanopore RNAseq data
alignment rna-seq nanopore written 14 months ago by Florian Bernard • 70 • updated 4 months ago by v.shapovalova1 • 0
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News: Course: GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
assembly news nanopore written 6 months ago by carlopecoraro2 • 1.5k
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News: Comparative Genomics course in October - last 2 places left
illumina news next-gen pacbio nanopore written 6 months ago by carlopecoraro2 • 1.5k
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Oxford Nanopore sequencing_summary.txt file description
nanopore sequencing written 8 months ago by anastasiia.satyr • 20 • updated 6 months ago by WouterDeCoster ♦ 43k
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Blast an organism against a downloaded database
ncbi blast databases nanopore written 6 months ago by caro-ca • 0 • updated 6 months ago by Mensur Dlakic • 4.3k
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Tools for downsampling/resampling/subsampling Oxford Nanopore reads
nanopore written 6 months ago by nkuyfq • 60
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what do digitisation, offset, and range values mean in fast5 file of Nanopore sequencing
nanopore written 7 months ago by 1097049297 • 0
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How to use minimap2 with mappy within python script
alignment nanopore written 7 months ago by Rox • 1.1k
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chop Nanopore (long) reads
alignment nanopore sequencing written 7 months ago by lijingtang2010 • 0 • updated 7 months ago by ATpoint ♦ 32k
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High CDS Count in my assembled Genome using Nanopore reads (ONT) data
wgs high cds nanopore assembly written 7 months ago by Optimist • 90 • updated 7 months ago by h.mon ♦ 29k
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De novo hybrid genome assembly of novel bacteria
hybrid illumina nanopore assembly written 8 months ago by tmurphy201596 • 0 • updated 8 months ago by Mensur Dlakic • 4.3k
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Annotate plasmids with custom database + visualization
gene plasmid visualization nanopore annotation written 8 months ago by quimvipu1994 • 0 • updated 8 months ago by Mensur Dlakic • 4.3k
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Why do researchers prefer to use Oxford Nanopore Technologies' 1D and sequencing rather than 1D2 when sequencing the human genome?
human genome sequencing nanopore ont written 8 months ago by kamanovae • 0
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Filter nanopore fastq files by start time
filter fastq nanopore start time written 8 months ago by sendhelp • 0 • updated 8 months ago by genomax ♦ 80k
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Processing Raw Nanopore Data
base calling nanopore sequencing written 9 months ago by anastasiia.satyr • 20 • updated 9 months ago by WouterDeCoster ♦ 43k
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Mapping to custom reference minimap2/IGV
minimap2 mapping nanopore igv written 9 months ago by sendhelp • 0 • updated 9 months ago by genomax ♦ 80k
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Improvement of genome assembly using illumina contigs and nanopore reads
illumina nanopore scaffolding genome assembly written 9 months ago by KG • 10 • updated 9 months ago by h.mon ♦ 29k
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