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-bash: ./HeatMap.R: cannot execute binary file. Why is this?

rnaseq rpm heatmapscript mapping written 4 months ago by jaqx008 • 40

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Best/right way to quantify small RNA transcripts

multi-mapping rpm small rna-seq written 12 months ago by Chirag Nepal • 2.2k

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Difference between CPM and RPM for RNA-seq reada quantification

rpm mirnas rna-seq cpm written 17 months ago by v82masae • 100 • updated 17 months ago by mforde84 • 1.2k

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Recent Replies

C: how to count the nucleotide frequency of paired ended fasta files by Damian Kao ♦ 15k
Are your fastqs paired in the same order already? Do you have entries where one of the pair (forw...
C: how to count the nucleotide frequency of paired ended fasta files by Learner • 130
@h.man I still don’t know what I should do with forward and revers !!! Sorry for confusion . I t...
C: how to count the nucleotide frequency of paired ended fasta files by Learner • 130
@genomax , do you know what exactly it does to each fastq ? I means I should do that for both for...
C: how to count the nucleotide frequency of paired ended fasta files by genomax ♦ 62k
Official BBMap repo is [located here][1]. Reformat is a versatile utility that does a ton of othe...
A: Principles and Workflow of 16S/18S/ITS Amplicon Sequencing by al-ash • 100
"ITS (Internal Transcribed Spacer) is part of the non-transcriptional region of the fungal rRNA g...
C: An R error by using xhmmScripts in XHMM by Shingo • 10
Thanks for your reply. I ran the XHMM on linux and draw the plot with the results on local Rstudio.
C: how to count the nucleotide frequency of paired ended fasta files by h.mon ♦ 23k
His original idea can be found at the post you linked: https://www.biostars.org/p/289847/
C: how to count the nucleotide frequency of paired ended fasta files by Learner • 130
@genomax can you paste the `reformat.sh` here please? or is it this bash file ? https://github.c...
A: beginner snakemake scatter gather help by ya • 0
Snakemake basically just checks whether the input file and output file exist or not. The i/o thi...
C: how to count the nucleotide frequency of paired ended fasta files by Learner • 130
@h.mon when I click on his name, it takes me to his all questions not exactly his original idea
C: how to count the nucleotide frequency of paired ended fasta files by h.mon ♦ 23k
What do you mean? I pointed you to the original parsing idea, it is the code snippet above.
A: Filtering BLAST results by flogin • 0
Thanks guys, both suggestions are working! Best,

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