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Salmon with Sleuth
sleuth salmon rna-seq written 5 days ago by koaeb10 • updated 5 days ago by dsull1.4k
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Import Salmon output by tximport
tximport R salmon rna-seq written 5 days ago by koaeb10 • updated 5 days ago by RamRS28k
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Salmon number of burn-in fragments warning
salmon mapping rna-seq written 8 days ago by bioinfo_cat0 • updated 8 days ago by h.mon30k
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Dependencies auto-installed with Conda?
salmon conda nesoni written 3.6 years ago by Liflock0 • updated 12 days ago by Biostar ♦♦ 20
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Tximport error with Salmon data
R salmon rna-seq written 16 days ago by lilyolmstead0 • updated 16 days ago by RamRS28k
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Salmon auxiliary output
salmon written 9 months ago by g.wang210 • updated 21 days ago by mcsimenc10
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Error with snakemake
python pipeline snakemake salmon written 2.1 years ago by Biologist190 • updated 24 days ago by Biostar ♦♦ 20
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Salmon quant in Galaxy vs Command Line
salmon rna-seq written 6 weeks ago by NewtoBioinfo0 • updated 6 weeks ago by genomax87k
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7 follow
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Having trouble running Salmon in Anaconda prompt
software error anaconda salmon python written 3 months ago by zal40020 • updated 7 weeks ago by zx87549.4k
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salmon shell script to automate quant
shellscript salmon written 3 months ago by amitpande740 • updated 3 months ago by ATpoint36k
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11 follow
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Mapping vs Quasi-Mapping
salmon quasi-mapping written 2.0 years ago by vincentpailler140 • updated 3 months ago by biochemistry-tehran0
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Salmon: Any downstream DEA tools which uses abundance estimate variation information?
deseq2 salmon written 18 months ago by Thomas90 • updated 3 months ago by ATpoint36k
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3
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Salmon only processes human reads from PDX data
software error alignment salmon rna-seq written 6 months ago by jrleary130 • updated 3 months ago by sandeep.amberkar1850
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featureCounts with pseudobam
featurecounts salmon rna-seq pseudobam kallisto written 3.6 years ago by mccormack40 • updated 4 months ago by ATpoint36k
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From transcript to gene - Salmon quantification
salmon written 4 months ago by JulianC10 • updated 4 months ago by ATpoint36k
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can salmon distinguish similar transcript?
salmon rna-seq written 5 months ago by arezu.lari0 • updated 5 months ago by ATpoint36k
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MPI/multi-threading in salmon quasi-mapping
salmon rna-seq written 5 months ago by vaushev10 • updated 5 months ago by Devon Ryan96k
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warning when creating salmon index from GENCODE transcriptome
salmon rna-seq written 5 months ago by vaushev10 • updated 5 months ago by Rob4.0k
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