Showing: salmonreset
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Salmon and reads order in fastq in quasi-mapping-based mode
salmon written 6 weeks ago by ZheFrench70 • updated 6 weeks ago by ATPoint2.6k
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Salmon unmapped reads
salmon mapping rna-seq written 8 weeks ago by Sharon120 • updated 8 weeks ago by Sean Davis24k
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Salmon very low mapping
salmon rna-seq written 9 weeks ago by Tania50
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How can we validate RNAseq differential gene expressions?
cuffdiff tophat salmon rna-seq edger written 9 weeks ago by Sharon120 • updated 9 weeks ago by Devon Ryan74k
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Transcripts ID matching in tximport for edgeR
tximport salmon rna-seq edger written 10 weeks ago by Sharon120 • updated 10 weeks ago by WouterDeCoster24k
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From transcripts counts of Salmon to genes counts needed by edgeR
salmon rna-seq edger written 10 weeks ago by Sharon120 • updated 10 weeks ago by Rob2.2k
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SALMON's warning library type
salmon rna-seq written 6 months ago by biks.kestro10 • updated 6 months ago by WouterDeCoster24k
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salmon, kallisto psuedoaligners are failing to process
aligners salmon kallisto rna-seq written 7 months ago by dr.prasad.bvls10 • updated 7 months ago by Rob2.2k
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File containing a mapping of transcripts to genes - Salmon on Galaxy
galaxy salmon rna-seq written 8 months ago by MANISH RANJAN40 • updated 8 months ago by Devon Ryan74k
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Common Cutoff in TPM unit to filter out gene considered as low expressed.
tpm salmon rna-seq written 10 months ago by ZheFrench70 • updated 10 months ago by Devon Ryan74k
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Dependencies auto-installed with Conda?
salmon conda nesoni written 13 months ago by Liflock0 • updated 11 months ago by Devon Ryan74k
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featureCounts with pseudobam
featurecounts salmon rna-seq pseudobam kallisto written 12 months ago by mccormack20 • updated 12 months ago by genomax40k
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Salmon libtype - Does it matter?
alignment salmon written 17 months ago by Matthias10
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