Showing: sciclonereset
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5
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How to convert bam-readcount output to BED-VAF format
loh sciclone snp bam-readcount sequencing written 11 months ago by Haitao20 • updated 7 days ago by tangming20052.2k
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1
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101
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SciClone Cluster Number
sciclone written 15 days ago by mndavies2860 • updated 13 days ago by Chris Miller18k
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0
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109
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sciClone input LOH
loh sciclone input written 21 days ago by shumaila.sayyab0
3
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1
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169
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sciClone: usage for inferring tumor clonality
tumor-heterogeneity R sciclone genome written 29 days ago by mp8510 • updated 28 days ago by Chris Miller18k
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245
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sciClone: Multiple alleles at single position
sciclone written 9 weeks ago by fongchunchan10 • updated 9 weeks ago by Chris Miller18k
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407
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SciClone on WES data
dnacopy varscan clonality wes sciclone written 5 months ago by mar.ark.parr30 • updated 4 months ago by Chris Miller18k
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375
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The meaning of VAF and LOH in sciclone
sciclone wes vaf loh written 5 months ago by shiyang9310 • updated 5 months ago by Chris Miller18k
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3
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3
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0
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1
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407
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Regions to Exclude and useSexChromosome questions
sciclone written 8 months ago by johnbrown320 • updated 8 months ago by Chris Miller18k
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0
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1
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695
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sciClone:input data wrong
dnacopy varscan copy number sciclone cluster written 12 months ago by lyan.liu0 • updated 12 months ago by Chris Miller18k
2
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1
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390
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1
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SciClone: Extra Cluster When Recreating Figure 3
sciclone written 12 months ago by stephanie.hilz30 • updated 12 months ago by Chris Miller18k
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2
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Sciclone on exome sequencing data
copy number sciclone exome seq written 19 months ago by chloe.steen120 • updated 12 months ago by Chris Miller18k
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2
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Question about sciClone example data and test script
sciclone written 15 months ago by uki_al20 • updated 15 months ago by Nikleotide70
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1
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1
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Clonal Evolution Plot (figure 3d)
sciclone written 17 months ago by david.melnekoff10 • updated 17 months ago by Chris Miller18k
7
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1
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758
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Only one cluster in multiple tumor phylogeny samples
R next-gen sciclone snp sequencing written 17 months ago by ceruleanivy30 • updated 17 months ago by Chris Miller18k
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1
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536
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The plot generated by sciClone
dnacopy wes sciclone written 19 months ago by lhaiyan310 • updated 19 months ago by Chris Miller18k
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1
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888
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SciClone: How to interpret Coverage vs VAF plots
sciclone coverage sequencing written 19 months ago by B. Arman Aksoy1.2k • updated 19 months ago by Chris Miller18k
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562
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sciClone annotation file
R sciclone annotation written 20 months ago by benng600 • updated 20 months ago by Chris Miller18k
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Running sciClone on cell prevalence (CP) data
subclonal-analysis sciclone clonality cancer written 20 months ago by marki60 • updated 20 months ago by Chris Miller18k
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Help with "sciClone" process and output
subclonality sciclone written 22 months ago by venu4.3k • updated 22 months ago by Chris Miller18k
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sciClone error for two sample
cna sciclone snv written 3.0 years ago by Lisa20 • updated 3.0 years ago by Chris Miller18k
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sciClone error with analysis
tumor heterogeneity sciclone rna-seq error cancer written 3.4 years ago by cristinam0920 • updated 3.3 years ago by Chris Miller18k
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error with sciClone
R tumor heterogeneity sciclone cancer written 3.4 years ago by cristinam0920 • updated 3.3 years ago by vchris_ngs4.0k
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