Showing: sciclonereset
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4
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144
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Sciclone took too long
sciclone written 27 days ago by sm.hashemin60
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119
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2
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1
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89
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Sciclone clonevol integration
clonevol sciclone written 28 days ago by sm.hashemin60 • updated 27 days ago by Chris Miller19k
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1
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83
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1
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Can sciclone handle multiallelic variants?
multiallelic_variants sciclone written 28 days ago by sm.hashemin60 • updated 27 days ago by Chris Miller19k
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469
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sciClone: Multiple alleles at single position
sciclone written 10 months ago by fongchunchan10 • updated 5 months ago by Biostar ♦♦ 20
2
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1
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372
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1
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SciClone: Which Variant to Which Clone
sciclone genotype written 7 months ago by stphnwist0 • updated 7 months ago by Chris Miller19k
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4
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4
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How to convert bam-readcount output to BED-VAF format
loh sciclone snp bam-readcount sequencing written 19 months ago by Haitao30 • updated 8 months ago by Ming Tang2.3k
1
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1
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356
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1
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SciClone Cluster Number
sciclone written 8 months ago by mndavies2860 • updated 8 months ago by Chris Miller19k
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0
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375
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0
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sciClone input LOH
loh sciclone input written 8 months ago by shumaila.sayyab0
3
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1
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550
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1
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sciClone: usage for inferring tumor clonality
tumor-heterogeneity R sciclone genome written 9 months ago by mp8510 • updated 9 months ago by Chris Miller19k
1
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1
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858
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SciClone on WES data
dnacopy varscan clonality wes sciclone written 13 months ago by mar.ark.parr30 • updated 12 months ago by Chris Miller19k
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1
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895
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The meaning of VAF and LOH in sciclone
sciclone wes vaf loh written 13 months ago by shiyang9340 • updated 13 months ago by Chris Miller19k
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3
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0
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1
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681
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Regions to Exclude and useSexChromosome questions
sciclone written 16 months ago by johnbrown320 • updated 16 months ago by Chris Miller19k
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1.1k
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0
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1.1k
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sciClone:input data wrong
dnacopy varscan copy number sciclone cluster written 20 months ago by lyan.liu0 • updated 20 months ago by Chris Miller19k
2
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1
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577
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SciClone: Extra Cluster When Recreating Figure 3
sciclone written 20 months ago by stephanie.hilz40 • updated 20 months ago by Chris Miller19k
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2
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2
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Sciclone on exome sequencing data
copy number sciclone exome seq written 2.3 years ago by chloe.steen130 • updated 21 months ago by Chris Miller19k
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2
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2
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Question about sciClone example data and test script
sciclone written 23 months ago by uki_al20 • updated 23 months ago by Nikleotide70
7
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1
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1
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Clonal Evolution Plot (figure 3d)
sciclone written 2.1 years ago by david.melnekoff10 • updated 2.1 years ago by Chris Miller19k
7
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1
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1.0k
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1
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Only one cluster in multiple tumor phylogeny samples
R next-gen sciclone snp sequencing written 2.1 years ago by ceruleanivy30 • updated 2.1 years ago by Chris Miller19k
0
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1
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717
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The plot generated by sciClone
dnacopy wes sciclone written 2.3 years ago by lhaiyan320 • updated 2.3 years ago by Chris Miller19k
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1
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1.2k
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SciClone: How to interpret Coverage vs VAF plots
sciclone coverage sequencing written 2.3 years ago by B. Arman Aksoy1.2k • updated 2.3 years ago by Chris Miller19k
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752
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sciClone annotation file
R sciclone annotation written 2.3 years ago by benng600 • updated 2.3 years ago by Chris Miller19k
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1
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1.0k
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1
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Running sciClone on cell prevalence (CP) data
subclonal-analysis sciclone clonality cancer written 2.3 years ago by marki60 • updated 2.3 years ago by Chris Miller19k
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1
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1.3k
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1
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Help with "sciClone" process and output
subclonality sciclone written 2.5 years ago by venu5.3k • updated 2.5 years ago by Chris Miller19k
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2
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2.1k
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sciClone error for two sample
cna sciclone snv written 3.6 years ago by Lisa20 • updated 3.6 years ago by Chris Miller19k
1
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1
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1.4k
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1
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sciClone error with analysis
tumor heterogeneity sciclone rna-seq error cancer written 4.1 years ago by cristinam0920 • updated 3.9 years ago by Chris Miller19k
1
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1
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2.0k
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