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sambamba-sort: Error reading BGZF with BAM file
software error sort sambamba written 5 weeks ago by marongiu.luigi520 • updated 5 weeks ago by ATpoint36k
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sorting for bedtools genomecov doesn't work properly
bedtools bedpe sort rna-seq bedgraph written 4 months ago by Assa Yeroslaviz1.3k • updated 4 months ago by Kevin Blighe61k
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samtools sorting and indexing
index samtools sort written 3.0 years ago by ggman80 • updated 5 months ago by onestop_data260
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How to get unique counts saved in a file
linux awk unique counts sort written 7 months ago by kittys0 • updated 7 months ago by genomax85k
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Linux sort P-values with scientific notation
pvalue sort scientific notation written 8 months ago by Shicheng Guo8.3k • updated 8 months ago by zx87549.3k
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How to get chrM chr1 ...chr22 chrX chrY order in my bam file
gatk picard snp bam sort written 8 months ago by Ada0 • updated 8 months ago by jkbonfield380
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bedtools sort -faidx in CWL
bedtools cwl sort written 13 months ago by dami10 • updated 8 months ago by kaushik.ghose70
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5 follow
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Pipe pysam.view() output to pysam.sort()
python sam alignment pysam sort written 9 months ago by Macspider3.0k • updated 9 months ago by gb1.8k
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6 follow
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How to sort sam file using shell script?
sam file forum samtools sort written 13 months ago by gerrybio20100 • updated 13 months ago by Bastien HervĂ©4.6k
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Interpro results analysis
column sort written 16 months ago by ksenia.jravel0
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36
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17 follow
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Remove duplicates in fasta file based on ID
fasta sed sort written 5.1 years ago by oliver.bayfield150 • updated 19 months ago by michau50
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samtools sort: legacy usage
genome metagenomics samtools sort written 20 months ago by c.e.chong20 • updated 20 months ago by h.mon30k
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should FASTA files be sorted before indexed with SAMtools?
fasta sort samtools index written 21 months ago by Timze W60 • updated 21 months ago by finswimmer13k
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sorting a BAM file
bam sort written 23 months ago by Bogdan1000 • updated 23 months ago by Philipp Bayer6.7k
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Issue while sorting a file
inconsistency trouble sort written 2.1 years ago by ricfoz30 • updated 2.1 years ago by drkennetz500
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Sorting with vcftools for tabix gone wrong
vcf tabix sort vcftools index written 5.8 years ago by axelwilhelm100 • updated 2.2 years ago by Biostar ♦♦ 20
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Samtools sort error with a bam file
bam samtools rna-seq sort written 2.3 years ago by Vasu450 • updated 2.3 years ago by Devon Ryan95k
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How to specify the sort based on name in samtools sort?
htseq bam samtools rna-seq sort written 2.6 years ago by anc.informatics0 • updated 2.6 years ago by finswimmer13k
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5 follow
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unique list based on multiple column
awk sort written 2.7 years ago by Sam140 • updated 2.7 years ago by aka001190
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