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Mean reads length for 400 bp reads in ion Torrent

torrent ngs bacterial read length written 22 months ago by Maloki • 10

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820

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Read simulators for Ion Torrent platform specific for WES

torrent simulation wes ion amliseq written 2.8 years ago by world_genesis • 0

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2.7k

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Ion Torrent sample data

torrent alignment tool sample ion written 5.0 years ago by Milan Domazet • 10 • updated 5.0 years ago by Keith Callenberg • 940

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Recent Replies

C: Forward and reverse single cell data analysis by GenoMax ♦ 96k
We don't know if OP is going to use `cellranger`.
C: netmatch app crash by scooter • 420
Can provide some additional information for us? Specifically, what version of Cytoscape are you ...
C: Forward and reverse single cell data analysis by ATpoint ♦ 45k
\#til -- another reason to use Alevin over CellRanger :-P
C: Identifying cancer subtypes by glady • 270
bulk tumor = RNA-seq data from the whole tumor. Not multiple datasets, I mean to say a single dat...
C: Forward and reverse single cell data analysis by swbarnes2 ♦ 9.6k
That will not work. Cellranger is fussy about file names, it won't read that file in.
A: Forward and reverse single cell data analysis by swbarnes2 ♦ 9.6k
Don't cat the files. Cellranger is smart, it will get files with the same sample name from all l...
C: How to install R in WinSCP server by Fede_Santos95 • 0
When I run uname -a, I found in the shell of putty: Linux platonesrv1 5.4.0-66-generic #74-Ubu...
C: How to install R in WinSCP server by Fede_Santos95 • 0
Yes, the operating system of the server is Ubuntu. I have a profile thanks to which I can use fil...
A: Multiple ensembl gene ID for the same gene name (Symbol), how to deal with this by Swarna • 0
Thank you very much Sir.
C: diferentially expressed ensembl ID to gene symbol conversion by imaparna27 • 0
I could finally solve this issue, all the syntax and steps given above are correct. I could not g...
C: Affymatrix microarray data do not have normal distribution after normalization ( by Kevin Blighe ♦ 70k
Ah, I see, it should still be okay. I have seen a histogram like that just this morning. The dis...
C: Identifying cancer subtypes by seidel ♦ 7.4k
By bulk tumor data - you mean bulk RNA-Seq data from a whole tumor, correct? When you say *a* dat...

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