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<prev • 35 results • page 1 of 2 • next >
6
votes
1
answer
132
views
1
answer
No mutations or copy number alterations was detected in stage I of cancer
stage one tumor snp copy number alteration written 6 weeks ago by nazaninhoseinkhan • 390
0
votes
1
answer
119
views
1
answer
Database about antigens, used in tumor vaccination?
cancer vaccination tumor database written 3 months ago by lefthandgergo • 10
0
votes
0
answers
176
views
0
answers
How rare are somatic mutations?
varscan tumor mutect snp somatic written 3 months ago by syntax • 50
128
votes
10
answers
54k
views
70 follow
10
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 8.1 years ago by Malachi Griffith ♦ 18k • updated 4 months ago by Shicheng Guo • 8.0k
1
vote
1
answer
226
views
1
answer
estimate tumor purity from target capture sequencing
purity tumor target capture sequencing estimation written 5 months ago by lffu_0032 • 40 • updated 5 months ago by dariober ♦ 10k
4
votes
1
answer
3.1k
views
6 follow
1
answer
tumor only variant calling tools
somatic ngs tumor mutation written 2.4 years ago by Zhenyu Zhang • 260 • updated 6 months ago by mariafirulevabio • 40
6
votes
1
answer
1.0k
views
5 follow
1
answer
How to obtain cancer cell fraction of each mutation in subclones of a single sample
phylogeny R tumor revolver written 9 months ago by fantastycrane • 10 • updated 8 months ago by zx8754 ♦ 8.8k
14
votes
3
answers
5.7k
views
12 follow
3
answers
TMB Tumor Mutation Burden
exome tumor mutation burden cancer written 23 months ago by abibioinformatics • 10 • updated 9 months ago by Shicheng Guo • 8.0k
1
vote
0
answers
295
views
0
answers
Variant calling on matched primary and metastatic tumor without normal samples.
tumor snp written 10 months ago by Venados • 10
4
votes
1
answer
765
views
1
answer
How can I call somatic CNV in tumor samples with no reference (control) samples?
tumor cnv written 13 months ago by Pin.Bioinf • 270 • updated 13 months ago by Kevin Blighe ♦ 53k
1
vote
0
answers
422
views
0
answers
Classify benign tumor vs malign tumor
indels snps tumor written 18 months ago by roalva1 • 80
1
vote
0
answers
545
views
0
answers
Allelic fraction and AF histogram
tumor purity sequencing written 20 months ago by lorenzo_fabbri • 10
0
votes
0
answers
551
views
0
answers
How representative the solid tumor sample is to that entire tumor lesion in terms of somatic mutation profile
tumor somatic mutation written 23 months ago by CY • 460
0
votes
0
answers
893
views
0
answers
Can we omit the normal input and compare tumor to pon only in MuTect2?
tumor rna-seq mutect written 23 months ago by Tania • 120
0
votes
1
answer
547
views
1
answer
detecting mutations in cancer samples belonging to the same cancer type
tumor ngs wes pipeline cancer written 24 months ago by lait • 140 • updated 24 months ago by morovatunc • 400
7
votes
5
answers
3.8k
views
5
answers
single sample somatic variant calling software
ffpe somatic tumor pipeline variants written 3.4 years ago by Zhenyu Zhang • 260 • updated 2.2 years ago by daniel • 30
0
votes
1
answer
797
views
1
answer
What is the best way to store clinical and genomic data
exome tumor written 2.4 years ago by bartek • 0 • updated 2.4 years ago by chen • 1.9k
0
votes
0
answers
810
views
0
answers
about using cn.MOPS in detecting CNV in WES of germline-tumor samples
tumor cn.mops cnv written 2.6 years ago by Bogdan • 910
2
votes
1
answer
1.4k
views
6 follow
1
answer
Tool: An online cute tool to query tumor-gene data from MSK-IMPACT project
msk tumor msk-impact tool mutation written 2.7 years ago by chen • 1.9k • updated 2.7 years ago by youcai • 50
0
votes
0
answers
968
views
0
answers
Can ABSOLUTE be used on Illumina 450k array copy number variation data?
450 absolute tumor copy number variation written 2.9 years ago by n.verburg • 0
0
votes
0
answers
674
views
0
answers
RNA expression profile for tumor sample OVER TIME
tumor rna-seq expression written 3.2 years ago by CY • 460
2
votes
1
answer
2.0k
views
1
answer
Freebayes tumor vs. normal inquiry
ngs tumor freebayes snp written 3.7 years ago by alons • 270 • updated 3.4 years ago by sambrightman • 20
12
votes
1
answer
1.1k
views
1
answer
Driver cancer genes
tumor mutations drivers written 3.6 years ago by Bnf83 • 130 • updated 3.6 years ago by russhh • 5.0k
1
vote
1
answer
2.0k
views
1
answer
How to run ABSOLUTE with WGS bam files ?
absolute next-gen matched normal tumor bam file written 3.7 years ago by subhajit06 • 110 • updated 3.7 years ago by purplerainf • 0
0
votes
0
answers
2.0k
views
0
answers
Specific microarray tumor clustering workflow
tumor microarray clustering written 5.4 years ago by mjarosz • 0 • updated 3.7 years ago by Biostar ♦♦ 20
1
vote
0
answers
883
views
0
answers
What are some programs that calculate aberrant cell percentages?
cytoscan tumor oncoscan aberrant dna written 4.0 years ago by kevin.patrick.mccormick • 10
0
votes
0
answers
1.6k
views
0
answers
Can ABSOLUTE use bam file as input?
tumor written 4.2 years ago by lyz10302012 • 330 • updated 4.2 years ago by Lemire • 460
0
votes
0
answers
1.7k
views
0
answers
Descrepancy with MACS model parameter for ChIP-Seq in tumor samples for Histone modifications
macs1.4 macs2 tumor chip-seq written 4.3 years ago by ivivek_ngs • 4.9k • updated 4.3 years ago by Biostar ♦♦ 20
3
votes
0
answers
1.4k
views
0
answers
Tutorial: Live webinar on 25 June: Copy Number Detection in Inherited Disorders and Somatic Cancer
dna-seq copy number analysis tutorial cnv strandngs tumor written 4.6 years ago by Genomics • 70
2
votes
0
answers
1.2k
views
0
answers
Job: Associate Director Bioinformatics
genome ngs tumor job sequencing written 4.7 years ago by jimfishin • 0
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