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<prev • 31 results • page 1 of 2 • next >
4
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260
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How to obtain cancer cell fraction of each mutation in subclones of a single sample
phylogeny R tumor revolver written 11 weeks ago by fantastycrane • 10 • updated 5 weeks ago by zx8754 ♦ 7.5k
14
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3
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4.7k
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12 follow
3
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TMB Tumor Mutation Burden
exome tumor mutation burden cancer written 16 months ago by abibioinformatics • 10 • updated 8 weeks ago by Shicheng Guo • 7.5k
1
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0
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148
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0
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Variant calling on matched primary and metastatic tumor without normal samples.
tumor snp written 12 weeks ago by Venados • 10
4
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1
answer
446
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1
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How can I call somatic CNV in tumor samples with no reference (control) samples?
tumor cnv written 6 months ago by Pin.Bioinf • 250 • updated 6 months ago by Kevin Blighe ♦ 43k
118
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9
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51k
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67 follow
9
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Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 7.5 years ago by Malachi Griffith ♦ 17k • updated 6 months ago by 21angelicguitars • 0
1
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0
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289
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Classify benign tumor vs malign tumor
indels snps tumor written 11 months ago by roalva1 • 80
1
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0
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382
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0
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Allelic fraction and AF histogram
tumor purity sequencing written 12 months ago by lorenzo_fabbri • 10
0
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0
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430
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0
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How representative the solid tumor sample is to that entire tumor lesion in terms of somatic mutation profile
tumor somatic mutation written 16 months ago by CY • 370
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0
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664
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Can we omit the normal input and compare tumor to pon only in MuTect2?
tumor rna-seq mutect written 16 months ago by Tania • 120
0
votes
1
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440
views
1
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detecting mutations in cancer samples belonging to the same cancer type
tumor ngs wes pipeline cancer written 17 months ago by lait • 130 • updated 17 months ago by morovatunc • 400
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5
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3.2k
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5
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single sample somatic variant calling software
ffpe somatic tumor pipeline variants written 2.8 years ago by Zhenyu Zhang • 240 • updated 19 months ago by daniel • 30
0
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1
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669
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1
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What is the best way to store clinical and genomic data
exome tumor written 21 months ago by bartek • 0 • updated 21 months ago by chen • 1.9k
4
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0
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2.3k
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5 follow
0
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tumor only variant calling tools
somatic ngs tumor mutation written 21 months ago by Zhenyu Zhang • 240
0
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0
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631
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0
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about using cn.MOPS in detecting CNV in WES of germline-tumor samples
tumor cn.mops cnv written 2.0 years ago by Bogdan • 800
2
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1
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1.3k
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6 follow
1
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Tool: An online cute tool to query tumor-gene data from MSK-IMPACT project
msk tumor msk-impact tool mutation written 2.1 years ago by chen • 1.9k • updated 2.1 years ago by youcai • 50
0
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0
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823
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0
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Can ABSOLUTE be used on Illumina 450k array copy number variation data?
450 absolute tumor copy number variation written 2.3 years ago by n.verburg • 0
0
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0
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602
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0
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RNA expression profile for tumor sample OVER TIME
tumor rna-seq expression written 2.6 years ago by CY • 370
2
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1
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1.7k
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1
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Freebayes tumor vs. normal inquiry
ngs tumor freebayes snp written 3.1 years ago by alons • 270 • updated 2.8 years ago by sambrightman • 20
12
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1
answer
940
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1
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Driver cancer genes
tumor mutations drivers written 3.0 years ago by Bnf83 • 130 • updated 3.0 years ago by russhh • 4.4k
1
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1
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1.7k
views
1
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How to run ABSOLUTE with WGS bam files ?
absolute next-gen matched normal tumor bam file written 3.1 years ago by subhajit06 • 110 • updated 3.1 years ago by purplerainf • 0
0
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0
answers
1.8k
views
0
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Specific microarray tumor clustering workflow
tumor microarray clustering written 4.8 years ago by mjarosz • 0 • updated 3.1 years ago by Biostar ♦♦ 20
1
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0
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767
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0
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What are some programs that calculate aberrant cell percentages?
cytoscan tumor oncoscan aberrant dna written 3.4 years ago by kevin.patrick.mccormick • 10
0
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0
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1.4k
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Can ABSOLUTE use bam file as input?
tumor written 3.6 years ago by lyz10302012 • 330 • updated 3.6 years ago by Lemire • 390
0
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0
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1.6k
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0
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Descrepancy with MACS model parameter for ChIP-Seq in tumor samples for Histone modifications
macs1.4 macs2 tumor chip-seq written 3.7 years ago by ivivek_ngs • 4.8k • updated 3.7 years ago by Biostar ♦♦ 20
3
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0
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1.3k
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Tutorial: Live webinar on 25 June: Copy Number Detection in Inherited Disorders and Somatic Cancer
dna-seq copy number analysis tutorial cnv strandngs tumor written 4.0 years ago by Genomics • 70
2
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0
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1.1k
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0
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Job: Associate Director Bioinformatics
genome ngs tumor job sequencing written 4.1 years ago by jimfishin • 0
2
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1
answer
1.9k
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1
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How to calculate aneuploidy across TCGA / ICGC tumor samples
aneuploidy tumor icgc tcga somatic written 4.2 years ago by mrgraeme • 20 • updated 4.1 years ago by Sean Davis ♦ 25k
0
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0
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1.4k
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0
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tumor sample SNP6 copy number calling
cna snp6 tumor copy number snp written 4.2 years ago by Zhenyu Zhang • 240 • updated 4.2 years ago by Pierre Lindenbaum ♦ 120k
2
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3
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1.6k
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3
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Identifying germline and tumor samples
normal tumor germline written 4.7 years ago by Kasthuri • 240 • updated 4.7 years ago by Renesh • 1.6k
0
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0
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1.1k
views
0
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tumor heterogeneity target capture
heterogeneity tumor target capture sequencing written 5.0 years ago by cristinam09 • 20 • updated 4.9 years ago by Biostar ♦♦ 20
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