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<prev • 28 results • page 1 of 1 • next >
109
votes
9
answers
44k
views
59 follow
9
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 6.6 years ago by Malachi Griffith ♦ 16k • updated 4 weeks ago by jake.lever • 10
1
vote
0
answers
95
views
0
answers
Classify benign tumor vs malign tumor
indels snps tumor written 6 weeks ago by roalva1 • 80
1
vote
0
answers
168
views
0
answers
Allelic fraction and AF histogram
tumor purity sequencing written 11 weeks ago by lorenzo_fabbri • 10
12
votes
2
answers
1.6k
views
11 follow
2
answers
TMB Tumor Mutation Burden
exome tumor mutation burden cancer written 6 months ago by abibioinformatics • 10 • updated 12 weeks ago by sutturka • 120
0
votes
0
answers
227
views
0
answers
How representative the solid tumor sample is to that entire tumor lesion in terms of somatic mutation profile
tumor somatic mutation written 5 months ago by CY • 140
0
votes
0
answers
294
views
0
answers
Can we omit the normal input and compare tumor to pon only in MuTect2?
tumor rna-seq mutect written 6 months ago by Tania • 120
0
votes
1
answer
243
views
1
answer
detecting mutations in cancer samples belonging to the same cancer type
tumor ngs wes pipeline cancer written 6 months ago by lait • 120 • updated 6 months ago by morovatunc • 360
7
votes
5
answers
2.1k
views
5
answers
single sample somatic variant calling software
ffpe somatic tumor pipeline variants written 2.0 years ago by Zhenyu • 200 • updated 9 months ago by daniel • 30
0
votes
1
answer
491
views
1
answer
What is the best way to store clinical and genomic data
exome tumor written 11 months ago by bartek • 0 • updated 11 months ago by chen • 1.7k
4
votes
0
answers
1.2k
views
5 follow
0
answers
tumor only variant calling tools
somatic ngs tumor mutation written 11 months ago by Zhenyu • 200
0
votes
0
answers
409
views
0
answers
about using cn.MOPS in detecting CNV in WES of germline-tumor samples
tumor cn.mops cnv written 14 months ago by Bogdan • 550
2
votes
1
answer
852
views
6 follow
1
answer
Tool: An online cute tool to query tumor-gene data from MSK-IMPACT project
msk tumor msk-impact tool mutation written 15 months ago by chen • 1.7k • updated 15 months ago by youcai • 40
0
votes
0
answers
563
views
0
answers
Can ABSOLUTE be used on Illumina 450k array copy number variation data?
450 absolute tumor copy number variation written 17 months ago by n.verburg • 0
0
votes
0
answers
485
views
0
answers
RNA expression profile for tumor sample OVER TIME
tumor rna-seq expression written 21 months ago by CY • 140
2
votes
1
answer
1.3k
views
1
answer
Freebayes tumor vs. normal inquiry
ngs tumor freebayes snp written 2.2 years ago by alons • 260 • updated 23 months ago by sambrightman • 20
12
votes
1
answer
755
views
1
answer
Driver cancer genes
tumor mutations drivers written 2.2 years ago by Bnf83 • 110 • updated 2.2 years ago by russhh • 3.7k
1
vote
1
answer
1.2k
views
1
answer
How to run ABSOLUTE with WGS bam files ?
absolute next-gen matched normal tumor bam file written 2.2 years ago by subhajit06 • 110 • updated 2.2 years ago by purplerainf • 0
0
votes
0
answers
1.6k
views
0
answers
Specific microarray tumor clustering workflow
tumor microarray clustering written 4.0 years ago by mjarosz • 0 • updated 2.3 years ago by Biostar ♦♦ 20
1
vote
0
answers
583
views
0
answers
What are some programs that calculate aberrant cell percentages?
cytoscan tumor oncoscan aberrant dna written 2.6 years ago by kevin.patrick.mccormick • 10
0
votes
1
answer
1.2k
views
1
answer
Can ABSOLUTE use bam file as input?
tumor written 2.8 years ago by lyz10302012 • 280 • updated 2.8 years ago by Lemire/OICR • 360
0
votes
0
answers
1.3k
views
0
answers
Descrepancy with MACS model parameter for ChIP-Seq in tumor samples for Histone modifications
macs1.4 macs2 tumor chip-seq written 2.9 years ago by vchris_ngs • 4.5k • updated 2.8 years ago by Biostar ♦♦ 20
3
votes
0
answers
1.1k
views
0
answers
Tutorial: Live webinar on 25 June: Copy Number Detection in Inherited Disorders and Somatic Cancer
dna-seq copy number analysis tutorial cnv strandngs tumor written 3.2 years ago by Genomics • 70
2
votes
0
answers
979
views
0
answers
Job: Associate Director Bioinformatics
genome ngs tumor job sequencing written 3.2 years ago by jimfishin • 0
2
votes
1
answer
1.6k
views
1
answer
How to calculate aneuploidy across TCGA / ICGC tumor samples
aneuploidy tumor icgc tcga somatic written 3.4 years ago by mrgraeme • 20 • updated 3.3 years ago by Sean Davis ♦ 24k
0
votes
0
answers
1.2k
views
0
answers
tumor sample SNP6 copy number calling
cna snp6 tumor copy number snp written 3.4 years ago by Zhenyu • 200 • updated 3.4 years ago by Pierre Lindenbaum ♦ 111k
2
votes
3
answers
1.4k
views
3
answers
Identifying germline and tumor samples
normal tumor germline written 3.8 years ago by Kasthuri • 230 • updated 3.8 years ago by Renesh • 1.3k
0
votes
0
answers
942
views
0
answers
tumor heterogeneity target capture
heterogeneity tumor target capture sequencing written 4.2 years ago by cristinam09 • 20 • updated 4.0 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.5k
views
1
answer
Pipeline for analysing multiple tumor/normal exome samples
exome tumor written 4.2 years ago by Nick • 250 • updated 4.2 years ago by donfreed • 1.3k
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