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<prev • 29 results • page 1 of 1 • next >
4
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1
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131
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How can I call somatic CNV in tumor samples with no reference (control) samples?
tumor cnv written 3 days ago by Pin.Bioinf • 170 • updated 3 days ago by Kevin Blighe ♦ 33k
110
votes
9
answers
47k
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63 follow
9
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Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 7.0 years ago by Malachi Griffith ♦ 17k • updated 7 days ago by 21angelicguitars • 0
1
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0
answers
173
views
0
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Classify benign tumor vs malign tumor
indels snps tumor written 5 months ago by roalva1 • 80
1
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0
answers
248
views
0
answers
Allelic fraction and AF histogram
tumor purity sequencing written 6 months ago by lorenzo_fabbri • 10
12
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2
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3.1k
views
11 follow
2
answers
TMB Tumor Mutation Burden
exome tumor mutation burden cancer written 10 months ago by abibioinformatics • 10 • updated 7 months ago by sutturka • 120
0
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0
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314
views
0
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How representative the solid tumor sample is to that entire tumor lesion in terms of somatic mutation profile
tumor somatic mutation written 9 months ago by CY • 270
0
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0
answers
435
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0
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Can we omit the normal input and compare tumor to pon only in MuTect2?
tumor rna-seq mutect written 10 months ago by Tania • 120
0
votes
1
answer
328
views
1
answer
detecting mutations in cancer samples belonging to the same cancer type
tumor ngs wes pipeline cancer written 10 months ago by lait • 120 • updated 10 months ago by morovatunc • 380
7
votes
5
answers
2.6k
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5
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single sample somatic variant calling software
ffpe somatic tumor pipeline variants written 2.3 years ago by Zhenyu • 220 • updated 13 months ago by daniel • 30
0
votes
1
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553
views
1
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What is the best way to store clinical and genomic data
exome tumor written 15 months ago by bartek • 0 • updated 15 months ago by chen • 1.7k
4
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0
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1.7k
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5 follow
0
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tumor only variant calling tools
somatic ngs tumor mutation written 15 months ago by Zhenyu • 220
0
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0
answers
496
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0
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about using cn.MOPS in detecting CNV in WES of germline-tumor samples
tumor cn.mops cnv written 18 months ago by Bogdan • 690
2
votes
1
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1.0k
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6 follow
1
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Tool: An online cute tool to query tumor-gene data from MSK-IMPACT project
msk tumor msk-impact tool mutation written 19 months ago by chen • 1.7k • updated 19 months ago by youcai • 40
0
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0
answers
664
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0
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Can ABSOLUTE be used on Illumina 450k array copy number variation data?
450 absolute tumor copy number variation written 21 months ago by n.verburg • 0
0
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0
answers
528
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0
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RNA expression profile for tumor sample OVER TIME
tumor rna-seq expression written 2.1 years ago by CY • 270
2
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1
answer
1.4k
views
1
answer
Freebayes tumor vs. normal inquiry
ngs tumor freebayes snp written 2.6 years ago by alons • 260 • updated 2.3 years ago by sambrightman • 20
12
votes
1
answer
831
views
1
answer
Driver cancer genes
tumor mutations drivers written 2.6 years ago by Bnf83 • 130 • updated 2.6 years ago by russhh • 4.1k
1
vote
1
answer
1.5k
views
1
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How to run ABSOLUTE with WGS bam files ?
absolute next-gen matched normal tumor bam file written 2.6 years ago by subhajit06 • 110 • updated 2.6 years ago by purplerainf • 0
0
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0
answers
1.7k
views
0
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Specific microarray tumor clustering workflow
tumor microarray clustering written 4.3 years ago by mjarosz • 0 • updated 2.6 years ago by Biostar ♦♦ 20
1
vote
0
answers
660
views
0
answers
What are some programs that calculate aberrant cell percentages?
cytoscan tumor oncoscan aberrant dna written 2.9 years ago by kevin.patrick.mccormick • 10
0
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0
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1.3k
views
0
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Can ABSOLUTE use bam file as input?
tumor written 3.1 years ago by lyz10302012 • 310 • updated 3.1 years ago by Lemire • 380
0
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0
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1.5k
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0
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Descrepancy with MACS model parameter for ChIP-Seq in tumor samples for Histone modifications
macs1.4 macs2 tumor chip-seq written 3.2 years ago by vchris_ngs • 4.6k • updated 3.2 years ago by Biostar ♦♦ 20
3
votes
0
answers
1.2k
views
0
answers
Tutorial: Live webinar on 25 June: Copy Number Detection in Inherited Disorders and Somatic Cancer
dna-seq copy number analysis tutorial cnv strandngs tumor written 3.5 years ago by Genomics • 70
2
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0
answers
1.0k
views
0
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Job: Associate Director Bioinformatics
genome ngs tumor job sequencing written 3.6 years ago by jimfishin • 0
2
votes
1
answer
1.7k
views
1
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How to calculate aneuploidy across TCGA / ICGC tumor samples
aneuploidy tumor icgc tcga somatic written 3.7 years ago by mrgraeme • 20 • updated 3.6 years ago by Sean Davis ♦ 25k
0
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0
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1.2k
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0
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tumor sample SNP6 copy number calling
cna snp6 tumor copy number snp written 3.7 years ago by Zhenyu • 220 • updated 3.7 years ago by Pierre Lindenbaum ♦ 115k
2
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3
answers
1.5k
views
3
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Identifying germline and tumor samples
normal tumor germline written 4.2 years ago by Kasthuri • 240 • updated 4.2 years ago by Renesh • 1.5k
0
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0
answers
1.0k
views
0
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tumor heterogeneity target capture
heterogeneity tumor target capture sequencing written 4.5 years ago by cristinam09 • 20 • updated 4.4 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.6k
views
1
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Pipeline for analysing multiple tumor/normal exome samples
exome tumor written 4.5 years ago by Nick • 250 • updated 4.5 years ago by donfreed • 1.3k
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