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Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
6 days ago by iamsmor • 0
4
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6
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636
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Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
rnaseq variantcalling addreadgroups gatk
updated 7 days ago by 154k • written 7 days ago by • 0
0
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1
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636
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Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
7 days ago by iamsmor • 0
0
votes
1
reply
636
views
Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
7 days ago by iamsmor • 0
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0
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6.6k
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Answer: Answer: Where to find known sites for mm39 used by GATK4 BaseRecalibrator?
7 weeks ago by iamsmor • 0
0
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1
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734
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Does the order of SplitNCigarReads and MarkDuplicates affect RNA-seq variant calling results?
variantcalling. rnaseq gatk
updated 4 months ago by ★ 1.7k • written 4 months ago by • 0
1
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1
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1.2k
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GATK BQSR error — Reference and BAM file chromosome name mismatch (“chr” vs. no “chr”)
GATK VCF BSQR
updated 5 months ago by 45k • written 5 months ago by • 0
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0
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1.1k
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Comment: Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
13 months ago by iamsmor • 0
0
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2
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1.1k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
bioconductor Rpackage clusterprofiler
13 months ago by iamsmor • 0
1
vote
1
reply
750
views
Pathway analysis for mouse gene sets
mouse GAGE pathway-analysis gene-enrichment
updated 14 months ago by ★ 4.7k • written 14 months ago by • 0
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0
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474
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AlphaFold3 molecular docking
alphafold3 ligand moleculardocking
14 months ago by iamsmor • 0
0
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1
reply
750
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Automated my docking results by using script
Receptor-ligand-interaction DSV VINA
updated 17 months ago by 45k • written 17 months ago by • 0
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0
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3.4k
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Comment: Comment: Downloaded pdb's on rcsb.org
18 months ago by iamsmor • 0
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1
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3.4k
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Comment: Comment: Downloaded pdb's on rcsb.org
18 months ago by iamsmor • 0
12
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12
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3.4k
views
Downloaded pdb's on rcsb.org
rcsb pdb
updated 13 months ago by 45k • written 18 months ago by • 0
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2
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3.4k
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Comment: Comment: Downloaded pdb's on rcsb.org
updated 18 months ago by 45k • written 18 months ago by • 0
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0
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1.6k
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Comment: Comment: autodockvina
22 months ago by iamsmor • 0
0
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2
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1.6k
views
autodockvina
python python3 autodock
updated 18 months ago by 45k • written 22 months ago by • 0
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1
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4.3k
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Comment: Comment: autodock vina on mac
updated 23 months ago by 45k • written 23 months ago by • 0
2
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3
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4.3k
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autodock vina on mac
docking mgltools virtualbox
updated 23 months ago by 45k • written 23 months ago by • 0
0
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0
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709
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Diffdock
molecular-docking diffdock multi-protein autodock-vina
updated 2.2 years ago by 45k • written 2.2 years ago by • 0
0
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0
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525
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molecular docking of thousands of proteins with a ligand
autodock-vina blind-docking
updated 2.2 years ago by 45k • written 2.2 years ago by • 0
0
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1
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1.4k
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Comment: Comment: molecular docking for a ligand to multi protein
2.2 years ago by iamsmor • 0
0
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3
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1.4k
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molecular docking for a ligand to multi protein
molecular-docking autodock-vina
updated 2.2 years ago by • 0 • written 2.2 years ago by • 0
0
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0
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2.4k
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Comment: Comment: pymol for superimpose by python script
3.4 years ago by iamsmor • 0
3
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2
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2.4k
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pymol for superimpose by python script
png python pymol superimposition
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
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0
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2.8k
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Comment: Comment: Superimpose two proteins
3.4 years ago by iamsmor • 0
0
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0
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3.2k
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Comment: Comment: Pymol superimposition by python script
3.4 years ago by iamsmor • 0
0
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1
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3.2k
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Comment: Comment: Pymol superimposition by python script
updated 3.4 years ago by 45k • written 3.4 years ago by • 0
2
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4
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3.2k
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Pymol superimposition by python script
python superimposition pymol
3.4 years ago by iamsmor • 0
2
votes
6
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2.8k
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Superimpose two proteins
python pymol
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
0
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0
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2.8k
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Comment: Comment: Superimpose two proteins
3.4 years ago by iamsmor • 0
0
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1
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2.8k
views
Comment: Comment: Superimpose two proteins
3.4 years ago by iamsmor • 0
0
votes
1
reply
881
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Protein protein interaction network
cytoscape DEGs NDExintegratedquery networkanalyst
updated 3.4 years ago by ▴ 650 • written 3.4 years ago by • 0
0
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0
replies
700
views
GREIN tool
DEG GREIN
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
0
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0
replies
1.1k
views
Comment: Comment: Entrez e-link Puchem compound
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
0
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2
replies
1.1k
views
Entrez e-link Puchem compound
pubchem elink entrez
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
0
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0
replies
2.0k
views
Comment: Comment: GEO query package error
3.4 years ago by iamsmor • 0
1
vote
2
replies
2.0k
views
GEO query package error
R GEOquery RStudio
updated 2.2 years ago by 45k • written 3.4 years ago by • 0
0
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1
reply
1.5k
views
Comment: Comment: blast two protein by pdb id
3.4 years ago by iamsmor • 0
3
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5
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1.5k
views
blast two protein by pdb id
BLAST PROTEIN PYTHON
updated 3.4 years ago by 10k • written 3.4 years ago by • 0
0
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0
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1.5k
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Comment: Comment: blast two protein by pdb id
3.4 years ago by iamsmor • 0
1
vote
1
reply
1.3k
views
Gene enrichment analysis R studio error
RStudio
updated 3.4 years ago by ▴ 10 • written 3.8 years ago by • 0
0
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2
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1.6k
views
Gene Enrichment
RStudio enrichment readgmt gene
updated 3.8 years ago by ★ 1.6k • written 3.8 years ago by • 0
0
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0
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1.3k
views
Comment: Comment: create index bam without having sam file
3.8 years ago by iamsmor • 0
1
vote
2
replies
1.3k
views
create index bam without having sam file
bam
updated 2.2 years ago by 45k • written 3.8 years ago by • 0
0
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1
reply
1.0k
views
transcript id for gene id in ballgown
R DE ballgown
updated 2.2 years ago by 45k • written 3.8 years ago by • 0
0
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0
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1.8k
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Comment: Comment: Ballgown DE analysis
3.8 years ago by iamsmor • 0
3
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4
replies
1.8k
views
Ballgown DE analysis
R ballgown Differential-expression
updated 2.2 years ago by 45k • written 3.8 years ago by • 0
0
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0
replies
2.0k
views
Comment: Comment: tranfering sam file easy and fast way
3.8 years ago by iamsmor • 0
68 results • Page 1 of 2
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