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Comment: Comment: ChIP seq peak annotation
3 months ago by tsomakiank ▴ 40
2
votes
3
replies
504
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ChIP seq peak annotation
Homer ChIP-seq annotatePeaks.pl
updated 12 days ago by 38k • written 3 months ago by ▴ 40
0
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0
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280
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Comment: Comment: How annotation files are generated?
3 months ago by tsomakiank ▴ 40
0
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0
replies
280
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Comment: Comment: How annotation files are generated?
3 months ago by tsomakiank ▴ 40
0
votes
4
replies
280
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How annotation files are generated?
Gtf
3 months ago by tsomakiank ▴ 40
0
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0
replies
2.3k
views
Comment: Comment: Laptops for bioinformatics
4 months ago by tsomakiank ▴ 40
21
votes
19
replies
2.3k
views
10 follow
Laptops for bioinformatics
hardware Laptops
updated 3 months ago by 38k • written 4 months ago by ▴ 40
0
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1
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2.3k
views
Comment: Comment: Laptops for bioinformatics
4 months ago by tsomakiank ▴ 40
0
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1
reply
2.3k
views
Comment: Comment: Laptops for bioinformatics
4 months ago by tsomakiank ▴ 40
1
vote
1
reply
2.3k
views
Comment: Comment: Laptops for bioinformatics
4 months ago by tsomakiank ▴ 40
0
votes
0
replies
204
views
How to logarithmically combine chip seq peaks
log2 Chiseq
5 months ago by tsomakiank ▴ 40
4
votes
3
replies
5.4k
views
DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for package ‘DESeq2’)
DESeq2
updated 5 months ago by ▴ 10 • written 11 months ago by ▴ 40
0
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0
replies
442
views
Comment: Comment: Change window size in wiggle file.
5 months ago by tsomakiank ▴ 40
0
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1
reply
442
views
Comment: Comment: Change window size in wiggle file.
5 months ago by tsomakiank ▴ 40
0
votes
4
replies
442
views
Change window size in wiggle file.
wiggle window_size
updated 5 months ago by ▴ 720 • written 5 months ago by ▴ 40
0
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0
replies
466
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
5 months ago by tsomakiank ▴ 40
0
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0
replies
466
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
5 months ago by tsomakiank ▴ 40
0
votes
1
reply
466
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
5 months ago by tsomakiank ▴ 40
0
votes
5
replies
466
views
ChIPQC error <<Unable to process. Each bam file must be associated with at most one peakset.>>
ChIPQC
5 months ago by tsomakiank ▴ 40
0
votes
1
reply
210
views
Irreproducibility Discovery Rate for broad histone marks.
chip-seq idr
updated 6 months ago by 3.5k • written 6 months ago by ▴ 40
19
votes
13
replies
1.3k
views
8 follow
Forum: Can bioinformatics Phds be completely or almost completely done remotely?
PhD
updated 6 months ago by 5.9k • written 6 months ago by ▴ 40
0
votes
1
reply
289
views
LSF scheduler download
LSF_job_scheduler LSF
updated 6 months ago by 127k • written 6 months ago by ▴ 40
0
votes
0
replies
288
views
ChIPQC Error
ChIP-seq ChIPQC
7 months ago by tsomakiank ▴ 40
0
votes
0
replies
420
views
Comment: Comment: Run LSF job locally.
8 months ago by tsomakiank ▴ 40
0
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0
replies
420
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Comment: Comment: Run LSF job locally.
8 months ago by tsomakiank ▴ 40
0
votes
1
reply
420
views
Comment: Comment: Run LSF job locally.
8 months ago by tsomakiank ▴ 40
1
vote
6
replies
420
views
Run LSF job locally.
LSF LSFjob
8 months ago by tsomakiank ▴ 40
0
votes
0
replies
358
views
Comment: Comment: 0 enriched terms found (Gene Ontology Analysis)
9 months ago by tsomakiank ▴ 40
0
votes
2
replies
358
views
0 enriched terms found (Gene Ontology Analysis)
ClusterProfiler GeneOntology
9 months ago by tsomakiank ▴ 40
0
votes
0
replies
465
views
Comment: Comment: Remove contamination reads from fastq files
10 months ago by tsomakiank ▴ 40
0
votes
1
reply
465
views
Comment: Comment: Remove contamination reads from fastq files
10 months ago by tsomakiank ▴ 40
0
votes
4
replies
465
views
Remove contamination reads from fastq files
contamination tools rna-seq
10 months ago by tsomakiank ▴ 40
0
votes
0
replies
458
views
Comment: Comment: GENECODE gene annotation and ENSEMBL annotation analogy
10 months ago by tsomakiank ▴ 40
1
vote
2
replies
458
views
GENECODE gene annotation and ENSEMBL annotation analogy
ensembl gencode
10 months ago by tsomakiank ▴ 40
0
votes
0
replies
5.4k
views
Comment: Comment: DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for packa
11 months ago by tsomakiank ▴ 40
0
votes
0
replies
1.0k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
11 months ago by tsomakiank ▴ 40
4
votes
4
replies
1.0k
views
Linux Terminal vs PyCharm Terminal
Linux Terminal
updated 11 months ago by 127k • written 11 months ago by ▴ 40
0
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0
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1.0k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
11 months ago by tsomakiank ▴ 40
2
votes
4
replies
398
views
Question about analyzing data in high perforfmance computer.
hpc
updated 12 months ago by 38k • written 12 months ago by ▴ 40
0
votes
0
replies
398
views
Comment: Comment: Question about analyzing data in high perforfmance computer.
12 months ago by tsomakiank ▴ 40
0
votes
0
replies
395
views
Comment: Comment: Raw data clean up
12 months ago by tsomakiank ▴ 40
0
votes
2
replies
395
views
Raw data clean up
cleanup rawdata
12 months ago by tsomakiank ▴ 40
0
votes
0
replies
485
views
Comment: Comment: Equipment for bioinformatics.
12 months ago by tsomakiank ▴ 40
3
votes
3
replies
485
views
Equipment for bioinformatics.
hardware
updated 3 months ago by 38k • written 12 months ago by ▴ 40
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