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Comment: Comment: ChIP seq peak annotation
16 months ago by tsomakiank ▴ 40
2
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3
replies
1.1k
views
ChIP seq peak annotation
Homer ChIP-seq annotatePeaks.pl
updated 14 months ago by 43k • written 16 months ago by ▴ 40
0
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0
replies
637
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Comment: Comment: How annotation files are generated?
17 months ago by tsomakiank ▴ 40
0
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0
replies
637
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Comment: Comment: How annotation files are generated?
17 months ago by tsomakiank ▴ 40
0
votes
4
replies
637
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How annotation files are generated?
Gtf
17 months ago by tsomakiank ▴ 40
0
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0
replies
9.4k
views
Comment: Comment: Laptops for bioinformatics
18 months ago by tsomakiank ▴ 40
21
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20
replies
9.4k
views
11 follow
Laptops for bioinformatics
hardware Laptops
updated 10 months ago by 4.2k • written 18 months ago by ▴ 40
0
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1
reply
9.4k
views
Comment: Comment: Laptops for bioinformatics
18 months ago by tsomakiank ▴ 40
0
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1
reply
9.4k
views
Comment: Comment: Laptops for bioinformatics
18 months ago by tsomakiank ▴ 40
1
vote
1
reply
9.4k
views
Comment: Comment: Laptops for bioinformatics
18 months ago by tsomakiank ▴ 40
0
votes
0
replies
344
views
How to logarithmically combine chip seq peaks
log2 Chiseq
18 months ago by tsomakiank ▴ 40
5
votes
3
replies
8.9k
views
DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for package ‘DESeq2’)
DESeq2
updated 19 months ago by ▴ 20 • written 2.0 years ago by ▴ 40
0
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0
replies
847
views
Comment: Comment: Change window size in wiggle file.
19 months ago by tsomakiank ▴ 40
0
votes
1
reply
847
views
Comment: Comment: Change window size in wiggle file.
19 months ago by tsomakiank ▴ 40
0
votes
4
replies
847
views
Change window size in wiggle file.
wiggle window_size
updated 19 months ago by ▴ 790 • written 19 months ago by ▴ 40
0
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0
replies
1.1k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
19 months ago by tsomakiank ▴ 40
0
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0
replies
1.1k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
19 months ago by tsomakiank ▴ 40
0
votes
1
reply
1.1k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
19 months ago by tsomakiank ▴ 40
0
votes
5
replies
1.1k
views
ChIPQC error <<Unable to process. Each bam file must be associated with at most one peakset.>>
ChIPQC
19 months ago by tsomakiank ▴ 40
0
votes
1
reply
535
views
Irreproducibility Discovery Rate for broad histone marks.
chip-seq idr
updated 20 months ago by 3.9k • written 20 months ago by ▴ 40
19
votes
13
replies
2.7k
views
8 follow
Forum: Can bioinformatics Phds be completely or almost completely done remotely?
PhD
updated 20 months ago by 6.5k • written 20 months ago by ▴ 40
0
votes
1
reply
566
views
LSF scheduler download
LSF
updated 11 months ago by 43k • written 20 months ago by ▴ 40
0
votes
0
replies
458
views
ChIPQC Error
ChIP-seq ChIPQC
21 months ago by tsomakiank ▴ 40
0
votes
0
replies
813
views
Comment: Comment: Run LSF job locally.
22 months ago by tsomakiank ▴ 40
0
votes
0
replies
813
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Comment: Comment: Run LSF job locally.
22 months ago by tsomakiank ▴ 40
0
votes
1
reply
813
views
Comment: Comment: Run LSF job locally.
22 months ago by tsomakiank ▴ 40
1
vote
6
replies
813
views
Run LSF job locally.
LSF
updated 10 months ago by 43k • written 22 months ago by ▴ 40
0
votes
0
replies
823
views
Comment: Comment: 0 enriched terms found (Gene Ontology Analysis)
23 months ago by tsomakiank ▴ 40
0
votes
2
replies
823
views
0 enriched terms found (Gene Ontology Analysis)
ClusterProfiler GeneOntology
23 months ago by tsomakiank ▴ 40
0
votes
0
replies
889
views
Comment: Comment: Remove contamination reads from fastq files
24 months ago by tsomakiank ▴ 40
0
votes
1
reply
889
views
Comment: Comment: Remove contamination reads from fastq files
24 months ago by tsomakiank ▴ 40
0
votes
4
replies
889
views
Remove contamination reads from fastq files
contamination rna-seq
updated 11 months ago by 43k • written 24 months ago by ▴ 40
0
votes
0
replies
779
views
Comment: Comment: GENECODE gene annotation and ENSEMBL annotation analogy
2.0 years ago by tsomakiank ▴ 40
1
vote
2
replies
779
views
GENECODE gene annotation and ENSEMBL annotation analogy
ensembl gencode
2.0 years ago by tsomakiank ▴ 40
0
votes
0
replies
8.9k
views
Comment: Comment: DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for packa
2.0 years ago by tsomakiank ▴ 40
0
votes
0
replies
1.9k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
2.1 years ago by tsomakiank ▴ 40
4
votes
4
replies
1.9k
views
Linux Terminal vs PyCharm Terminal
Linux Terminal
updated 2.1 years ago by 142k • written 2.1 years ago by ▴ 40
0
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0
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1.9k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
2.1 years ago by tsomakiank ▴ 40
2
votes
4
replies
683
views
Question about analyzing data in high perforfmance computer.
hpc
updated 2.1 years ago by 43k • written 2.1 years ago by ▴ 40
0
votes
0
replies
683
views
Comment: Comment: Question about analyzing data in high perforfmance computer.
2.1 years ago by tsomakiank ▴ 40
0
votes
0
replies
603
views
Comment: Comment: Raw data clean up
2.1 years ago by tsomakiank ▴ 40
0
votes
2
replies
603
views
Raw data clean up
cleanup rawdata
2.1 years ago by tsomakiank ▴ 40
0
votes
0
replies
917
views
Comment: Comment: Equipment for bioinformatics.
2.1 years ago by tsomakiank ▴ 40
3
votes
3
replies
917
views
Equipment for bioinformatics.
hardware
updated 17 months ago by 43k • written 2.1 years ago by ▴ 40
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