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5
votes
15
replies
5.0k
views
6 follow
Why are there many reads with green color in IGV of RNA-seq data?
rna-seq IGV mapping
updated 5 weeks ago by • 0 • written 4.8 years ago by ▴ 160
0
votes
0
replies
629
views
Comment: Comment: Calculation of λ1000 for a continuous trait
6 weeks ago by Apprentice ▴ 160
0
votes
3
replies
629
views
Calculation of λ1000 for a continuous trait
SNP GWAS inflation
6 weeks ago by Apprentice ▴ 160
0
votes
0
replies
1.0k
views
Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by Apprentice ▴ 160
0
votes
1
reply
1.0k
views
Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by Apprentice ▴ 160
0
votes
0
replies
1.0k
views
Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by Apprentice ▴ 160
0
votes
3
replies
1.0k
views
Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by Apprentice ▴ 160
7
votes
15
replies
1.0k
views
6 follow
I would like to exclude rRNA in RSEM and quantify other genes.
STAR RNA-seq RSEM
updated 3 months ago by ★ 5.9k • written 3 months ago by ▴ 160
0
votes
0
replies
325
views
Comment: Comment: I would like to add a human gene sequence to a mouse reference genome
3 months ago by Apprentice ▴ 160
0
votes
2
replies
325
views
I would like to add a human gene sequence to a mouse reference genome
reference-genome mouse RNA-seq
updated 3 months ago by 43k • written 3 months ago by ▴ 160
0
votes
0
replies
305
views
If the names of miRNAs are the same for different species, are they the same sequence?
miRNA
4 months ago by Apprentice ▴ 160
0
votes
0
replies
217
views
Method for detecting X-chromosome aneuploidy from SNP array data
SNP aneuploidies
6 months ago by Apprentice ▴ 160
0
votes
1
reply
931
views
Comment: Comment: LD score table for East Asians used for BOLT-LMM
8 months ago by Apprentice ▴ 160
2
votes
3
replies
931
views
LD score table for East Asians used for BOLT-LMM
BOLT-LMM SNP LDSC
updated 8 months ago by 3.9k • written 8 months ago by ▴ 160
0
votes
0
replies
471
views
Comment: Comment: Is it possible to detect fusion genes by either stranded or unstranded RNA-seq?
8 months ago by Apprentice ▴ 160
2
votes
2
replies
471
views
Is it possible to detect fusion genes by either stranded or unstranded RNA-seq?
RNA-seq STAR-Fusion
8 months ago by Apprentice ▴ 160
0
votes
0
replies
294
views
PLINK format file for BOLT-LMM
BOLT-LMM SNP
8 months ago by Apprentice ▴ 160
0
votes
0
replies
930
views
Comment: Comment: RSEM uses different gene lengths for each sample.
8 months ago by Apprentice ▴ 160
2
votes
3
replies
930
views
RSEM uses different gene lengths for each sample.
STAR RNA-seq RSEM
8 months ago by Apprentice ▴ 160
0
votes
0
replies
1.1k
views
Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
9 months ago by Apprentice ▴ 160
0
votes
0
replies
1.1k
views
Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
9 months ago by Apprentice ▴ 160
0
votes
1
reply
1.1k
views
Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
9 months ago by Apprentice ▴ 160
3
votes
8
replies
1.1k
views
Is RSEM required for RNA-seq data analysis using STAR and edgeR?
edgeR RNA-seq STAR
9 months ago by Apprentice ▴ 160
0
votes
0
replies
306
views
Popcorn using SNPs with extremely low P-value
Popcorn SNP
10 months ago by Apprentice ▴ 160
2
votes
1
reply
566
views
PRSice-2 using SNPs with extremely low P-value
PRSice-2 SNP
10 months ago by Apprentice ▴ 160
1
vote
0
replies
566
views
Answer: Answer: PRSice-2 using SNPs with extremely low P-value
10 months ago by Apprentice ▴ 160
0
votes
0
replies
378
views
I want to set the null hypothesis for the test of genetic correlation to rg=1.
correlation LDSC genetic
11 months ago by Apprentice ▴ 160
1
vote
2
replies
830
views
Which 1000 genomes 30x files should I use for imputation?
1000genomes imputation SNP
15 months ago by Apprentice ▴ 160
0
votes
0
replies
830
views
Comment: Comment: Which 1000 genomes 30x files should I use for imputation?
15 months ago by Apprentice ▴ 160
0
votes
0
replies
789
views
Comment: Comment: I want to identify the version of MethylationEPIC from the idat file.
17 months ago by Apprentice ▴ 160
1
vote
2
replies
789
views
I want to identify the version of MethylationEPIC from the idat file.
Microarray methylation DNA
17 months ago by Apprentice ▴ 160
0
votes
1
reply
542
views
Application of repeated measurement data to missForest
R missForest
21 months ago by Apprentice ▴ 160
0
votes
0
replies
542
views
Answer: Answer: Application to repeated measurement data
21 months ago by Apprentice ▴ 160
0
votes
0
replies
600
views
Comment: Comment: Significance of giving read group when using hisat2
2.1 years ago by Apprentice ▴ 160
2
votes
2
replies
600
views
Significance of giving read group when using hisat2
RNA-Seq
2.1 years ago by Apprentice ▴ 160
0
votes
0
replies
1.3k
views
Comment: Comment: Unable to get all Uniprot IDs corresponding to Ensembl ID
2.2 years ago by Apprentice ▴ 160
5
votes
3
replies
1.3k
views
Unable to get all Uniprot IDs corresponding to Ensembl ID
Uniprot biomaRt
2.2 years ago by Apprentice ▴ 160
0
votes
0
replies
887
views
Comment: Comment: Is it possible to infer from miRNA-seq fastq data which species it is obtained f
2.2 years ago by Apprentice ▴ 160
0
votes
0
replies
887
views
Comment: Comment: Is it possible to infer from miRNA-seq fastq data which species it is obtained f
2.2 years ago by Apprentice ▴ 160
0
votes
4
replies
887
views
Is it possible to infer from miRNA-seq fastq data which species it is obtained from?
miRNA-seq
2.2 years ago by Apprentice ▴ 160
0
votes
1
reply
1.8k
views
Comment: Comment: Can AlphaFold v2 predict the structure of a tetramer?
2.2 years ago by Apprentice ▴ 160
4
votes
4
replies
1.8k
views
Can AlphaFold v2 predict the structure of a tetramer?
AlphaFold2
updated 2.2 years ago by ★ 2.5k • written 2.2 years ago by ▴ 160
0
votes
0
replies
1.3k
views
Comment: Comment: Reference panel data to be used for GCTA-COJO
2.4 years ago by Apprentice ▴ 160
0
votes
2
replies
749
views
How does gexpr function in ballgown package calculate the gene expression level from transcript expression levels?
ballgown FPKM R
updated 2.4 years ago by 82k • written 2.4 years ago by ▴ 160
0
votes
0
replies
853
views
Comment: Comment: Can AlphaFold2 be used to predict DNA binding from fasta sequences?
2.4 years ago by Apprentice ▴ 160
1
vote
2
replies
853
views
Can AlphaFold2 be used to predict DNA binding from fasta sequences?
DNA-binding AlphaFold2 protein
2.4 years ago by Apprentice ▴ 160
0
votes
0
replies
436
views
Applying data including both chrX variants and autosomal variants to SKAT
SKAT variant
2.4 years ago by Apprentice ▴ 160
0
votes
0
replies
1.6k
views
Comment: Comment: Imputation of X chromosome non-PAR for male subjects
2.7 years ago by Apprentice ▴ 160
0
votes
2
replies
1.6k
views
Imputation of X chromosome non-PAR for male subjects
SNP imputation X chromsoome
2.7 years ago by Apprentice ▴ 160
0
votes
2
replies
1.3k
views
Reference panel data to be used for GCTA-COJO
SNP GCTA
2.4 years ago by Apprentice ▴ 160
127 results • Page 1 of 3
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