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ArchRtoSignac
archr archrtosignac archr2signac signac
updated 3.1 years ago by 154k • written 3.1 years ago by ▴ 30
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0
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570
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Calling peaks with MACS following Bedtools
bedtools scATAC-seq signac
updated 2.4 years ago by 45k • written 3.1 years ago by ▴ 30
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0
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2.1k
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Comment: Comment: Using Harmony on scATAC Count Files
3.3 years ago by bioinformatics.girl ▴ 30
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2
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2.1k
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Comment: Comment: Using Harmony on scATAC Count Files
3.3 years ago by bioinformatics.girl ▴ 30
2
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5
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2.1k
views
Using Harmony on scATAC Count Files
scatac-seq ArchR Signac
3.3 years ago by bioinformatics.girl ▴ 30
1
vote
1
reply
779
views
How to create count file from fastq files
cellranger scATAC-seq cellranger-atac
updated 3.3 years ago by 154k • written 3.3 years ago by ▴ 30
8
votes
15
replies
6.1k
views
8 follow
gunzip error: File not in gzip format
gunzip linux gzip
updated 3.4 years ago by 12k • written 3.4 years ago by ▴ 30
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2
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6.1k
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Comment: Comment: File not in gzip format
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
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6.1k
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Comment: Comment: File not in gzip format
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
replies
6.1k
views
Comment: Comment: File not in gzip format
3.4 years ago by bioinformatics.girl ▴ 30
0
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1
reply
6.1k
views
Comment: Comment: File not in gzip format
3.4 years ago by bioinformatics.girl ▴ 30
0
votes
2
replies
1.9k
views
"Object of type 'closure' is not subsettable" Error
atac-seq scatac-seq archr
updated 3.4 years ago by 9.0k • written 3.4 years ago by ▴ 30
0
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1
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5.3k
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Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
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1
reply
5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
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1
reply
5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
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2
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5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
6
votes
29
replies
5.3k
views
Column lengths differ error (ArchR)
atac-seq cellranger r archr
updated 3.4 years ago by 154k • written 3.4 years ago by ▴ 30
0
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1
reply
5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
votes
2
replies
5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
replies
5.3k
views
Comment: Comment: Column lengths differ error (ArchR)
3.4 years ago by bioinformatics.girl ▴ 30
0
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1
reply
5.3k
views
Comment: Comment: Detected more columns than column names
3.4 years ago by bioinformatics.girl ▴ 30
0
votes
1
reply
5.3k
views
Comment: Comment: Detected more columns than column names
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
replies
5.3k
views
Comment: Comment: Detected more columns than column names
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
replies
5.3k
views
Comment: Comment: Detected more columns than column names
3.4 years ago by bioinformatics.girl ▴ 30
0
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0
replies
1.1k
views
Error in createArrowFiles ArchR Analysis
snatac-seq archr scatac-seq archrgenome atac-seq
3.5 years ago by bioinformatics.girl ▴ 30
0
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0
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1.3k
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Comment: Comment: Combining RNA and ATAC
3.5 years ago by bioinformatics.girl ▴ 30
0
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0
replies
3.9k
views
Comment: Comment: ERROR: "Fragment file is not indexed"
3.5 years ago by bioinformatics.girl ▴ 30
0
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1
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3.9k
views
Comment: Comment: ERROR: "Fragment file is not indexed"
3.5 years ago by bioinformatics.girl ▴ 30
0
votes
4
replies
3.9k
views
ERROR: "Fragment file is not indexed"
atac-seq cellranger snatac-seq
3.5 years ago by bioinformatics.girl ▴ 30
0
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1
reply
1.9k
views
Comment: Comment: Could not find function "CreateChromatinAssay"
3.5 years ago by bioinformatics.girl ▴ 30
0
votes
4
replies
1.9k
views
Could not find function "CreateChromatinAssay"
atac-seq 10x cellranger snatac-seq
updated 3.5 years ago by 21k • written 3.5 years ago by ▴ 30
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