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ArchRtoSignac
archr archrtosignac archr2signac signac
updated 18 months ago by 141k • written 18 months ago by ▴ 20
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285
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Calling peaks with MACS following Bedtools
bedtools scATAC-seq signac
updated 10 months ago by 43k • written 18 months ago by ▴ 20
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0
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1.1k
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Comment: Comment: Using Harmony on scATAC Count Files
20 months ago by bioinformatics.girl ▴ 20
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2
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1.1k
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Comment: Comment: Using Harmony on scATAC Count Files
20 months ago by bioinformatics.girl ▴ 20
2
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5
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1.1k
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Using Harmony on scATAC Count Files
scatac-seq ArchR Signac
20 months ago by bioinformatics.girl ▴ 20
1
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1
reply
469
views
How to create count file from fastq files
cellranger scATAC-seq cellranger-atac
updated 21 months ago by 141k • written 21 months ago by ▴ 20
8
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15
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2.7k
views
8 follow
gunzip error: File not in gzip format
gunzip linux gzip
updated 22 months ago by 11k • written 22 months ago by ▴ 20
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2
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2.7k
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Comment: Comment: File not in gzip format
22 months ago by bioinformatics.girl ▴ 20
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0
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2.7k
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Comment: Comment: File not in gzip format
22 months ago by bioinformatics.girl ▴ 20
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0
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2.7k
views
Comment: Comment: File not in gzip format
22 months ago by bioinformatics.girl ▴ 20
0
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1
reply
2.7k
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Comment: Comment: File not in gzip format
22 months ago by bioinformatics.girl ▴ 20
0
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2
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1.2k
views
"Object of type 'closure' is not subsettable" Error
atac-seq scatac-seq archr
updated 22 months ago by 8.9k • written 22 months ago by ▴ 20
0
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1
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3.2k
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Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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1
reply
3.2k
views
Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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1
reply
3.2k
views
Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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2
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3.2k
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Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
6
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29
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3.2k
views
Column lengths differ error (ArchR)
atac-seq cellranger r archr
updated 22 months ago by 141k • written 22 months ago by ▴ 20
0
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1
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3.2k
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Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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2
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3.2k
views
Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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0
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3.2k
views
Comment: Comment: Column lengths differ error (ArchR)
22 months ago by bioinformatics.girl ▴ 20
0
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1
reply
3.2k
views
Comment: Comment: Detected more columns than column names
22 months ago by bioinformatics.girl ▴ 20
0
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1
reply
3.2k
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Comment: Comment: Detected more columns than column names
22 months ago by bioinformatics.girl ▴ 20
0
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0
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3.2k
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Comment: Comment: Detected more columns than column names
22 months ago by bioinformatics.girl ▴ 20
0
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0
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3.2k
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Comment: Comment: Detected more columns than column names
22 months ago by bioinformatics.girl ▴ 20
0
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0
replies
691
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Error in createArrowFiles ArchR Analysis
snatac-seq archr scatac-seq archrgenome atac-seq
22 months ago by bioinformatics.girl ▴ 20
0
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0
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863
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Comment: Comment: Combining RNA and ATAC
22 months ago by bioinformatics.girl ▴ 20
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0
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2.1k
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Comment: Comment: ERROR: "Fragment file is not indexed"
22 months ago by bioinformatics.girl ▴ 20
0
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1
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2.1k
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Comment: Comment: ERROR: "Fragment file is not indexed"
22 months ago by bioinformatics.girl ▴ 20
0
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4
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2.1k
views
ERROR: "Fragment file is not indexed"
atac-seq cellranger snatac-seq
22 months ago by bioinformatics.girl ▴ 20
0
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1
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1.2k
views
Comment: Comment: Could not find function "CreateChromatinAssay"
22 months ago by bioinformatics.girl ▴ 20
0
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4
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1.2k
views
Could not find function "CreateChromatinAssay"
atac-seq 10x cellranger snatac-seq
updated 22 months ago by 21k • written 22 months ago by ▴ 20
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